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  5. Spov3_chr3.03350

Spov3_chr3.03350


Description : not classified


Gene families : OG0003821 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.03350
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.02572 UGT80A2, SGT not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02744 KEG not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02745 UGT80A2, SGT not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 820 874
IPR000477 RT_dom 504 580
IPR041577 RT_RNaseH_2 665 741
No external refs found!