Heatmap: Cluster_222 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_9061.1 (NOT11)	-0.94	-0.89	-0.78	-1.02	-0.24	0.02	-0.08	0.09	-0.49	-0.35	-0.3	-0.15	0.5	0.84	0.43	0.23	0.12	0.36	-0.1	-0.09	-0.05	-0.17	0.89	-0.01	-0.14	-0.18	-0.02	-0.44	0.01	0.11	0.59
Lsat_1_v5_gn_1_108381.1	-0.39	-0.35	-0.69	-0.53	0.03	0.05	-0.1	0.16	-0.57	-0.4	-0.29	-0.3	0.55	0.67	0.36	0.12	-0.09	0.49	-0.12	-0.32	-0.25	-0.21	0.55	-0.07	-0.09	0.03	-0.11	-0.24	0.1	0.03	0.62
Lsat_1_v5_gn_1_116521.1	-0.45	-0.38	-0.9	-0.72	0.38	0.36	-0.3	0.2	-0.71	-0.7	-0.52	-0.54	0.18	0.71	0.43	-0.17	-0.18	0.24	-0.12	-0.23	-0.31	-0.22	1.18	0.06	-0.12	-0.17	-0.13	-0.46	0.16	0.26	0.69
Lsat_1_v5_gn_1_17561.1 (FUS4)	-0.38	-0.41	-0.44	-0.31	0.35	0.36	-0.14	0.07	-0.43	-0.38	-0.35	-0.23	0.46	0.58	0.37	0.01	-0.03	0.23	-0.17	-0.38	-0.33	-0.34	0.82	-0.15	-0.14	-0.21	-0.39	-0.19	0.26	0.12	0.41
Lsat_1_v5_gn_1_25041.1	-0.81	-0.72	-0.7	-0.33	0.12	-0.08	-0.17	0.07	-0.36	-0.4	-0.26	-0.24	0.53	0.8	0.52	0.05	-0.15	0.68	-0.2	-0.24	-0.31	-0.26	0.72	-0.28	-0.19	-0.29	-0.21	-0.43	0.2	0.15	0.74
Lsat_1_v5_gn_1_29601.1 (BET9)	-0.45	-0.34	-0.75	-0.41	0.06	0.02	0.06	0.24	-0.45	-0.33	-0.28	-0.19	0.36	0.66	0.34	0.05	-0.02	0.41	-0.27	-0.15	-0.3	-0.19	0.77	-0.26	-0.18	-0.15	-0.26	-0.24	0.25	0.14	0.51
Lsat_1_v5_gn_1_30120.1	-1.25	-1.0	-0.89	-0.44	0.27	0.26	-0.07	0.1	-0.67	-0.44	-0.43	-0.44	0.2	0.81	0.54	-0.17	0.05	0.58	-0.19	-0.22	-0.19	-0.06	0.81	-0.22	-0.12	-0.1	-0.37	-0.5	0.29	0.28	0.85
Lsat_1_v5_gn_1_31320.1	-0.29	-0.17	-0.41	-0.42	0.08	0.18	-0.05	0.24	-0.58	-0.42	-0.2	-0.3	0.2	0.64	0.42	-0.01	-0.15	0.56	-0.07	-0.33	-0.32	-0.13	0.79	-0.16	-0.38	-0.11	-0.11	-0.35	0.1	-0.06	0.49
Lsat_1_v5_gn_2_30141.1 (G3)	-0.97	-0.96	-1.54	-0.68	0.21	0.08	-0.52	-0.03	-0.81	-0.41	-0.26	-0.43	1.0	0.94	0.47	-0.14	-0.19	0.76	-0.79	-0.56	-0.25	-0.42	0.32	-0.27	-0.51	0.06	-0.5	-0.42	0.43	0.43	1.39
Lsat_1_v5_gn_2_3700.1 (ARP7)	-0.51	-0.83	-0.83	-0.62	0.12	0.14	-0.24	0.05	-0.51	-0.31	-0.27	-0.42	0.72	0.65	0.53	-0.08	-0.22	0.54	-0.33	-0.27	-0.24	-0.18	0.42	-0.14	-0.2	-0.22	-0.17	-0.28	0.23	0.19	1.07
Lsat_1_v5_gn_2_5561.1	-1.23	-0.89	-0.84	-0.61	-0.06	-0.14	-0.47	-0.14	-0.44	-0.48	-0.25	-0.06	0.83	0.73	0.31	0.08	-0.03	0.68	-0.28	-0.15	-0.29	-0.26	0.34	-0.06	-0.27	-0.08	-0.21	-0.39	0.3	0.29	1.19
Lsat_1_v5_gn_3_11200.1 (SUN5)	-1.29	-1.27	-1.67	-1.98	0.37	0.46	0.11	0.12	-0.43	-0.69	-0.24	-0.53	0.24	0.79	0.57	-0.23	-0.48	0.3	0.21	-0.35	-0.38	-0.14	1.12	-0.1	-0.09	-0.3	-0.13	-0.43	0.32	0.3	1.05
Lsat_1_v5_gn_3_45921.1 (AIC1)	-0.74	-0.57	-0.71	-0.54	0.03	0.07	0.06	0.34	-0.44	-0.4	-0.24	-0.18	0.4	0.7	0.49	0.07	-0.07	0.61	0.09	-0.32	-0.39	-0.28	0.67	-0.18	-0.26	-0.14	-0.21	-0.35	0.1	0.07	0.62
Lsat_1_v5_gn_3_48380.1 (ARID2)	-0.61	-0.59	-0.81	-0.43	-0.07	0.09	-0.24	-0.02	-0.33	-0.52	-0.19	-0.24	0.57	0.62	0.45	0.01	-0.11	0.49	-0.13	-0.3	-0.19	-0.23	0.65	-0.15	-0.14	-0.1	-0.17	-0.35	0.09	0.17	0.95
Lsat_1_v5_gn_3_90121.1	-0.66	-0.64	-0.32	-0.24	0.11	0.08	-0.24	-0.16	-0.25	-0.48	-0.28	-0.4	0.03	0.62	0.39	-0.09	-0.17	0.66	-0.08	-0.02	0.04	-0.11	0.71	-0.14	-0.09	-0.02	-0.05	-0.15	0.1	0.06	0.55
Lsat_1_v5_gn_4_111021.1	-1.03	-0.61	-1.05	-1.05	0.48	0.33	-0.16	0.35	-0.72	-0.5	-0.38	-0.39	0.43	0.75	0.43	0.08	-0.06	0.79	-0.19	-0.41	-0.21	-0.23	0.86	-0.19	-0.22	-0.07	-0.18	-0.48	-0.0	0.01	0.73
Lsat_1_v5_gn_4_128021.1 (CAK2AT)	-0.34	-0.57	-0.66	-0.65	-0.14	0.17	-0.02	0.23	-0.26	-0.26	-0.22	-0.33	0.44	0.49	0.26	0.02	-0.04	0.18	-0.04	-0.14	-0.16	-0.08	0.51	-0.04	-0.07	0.0	-0.02	-0.13	0.18	0.19	0.53
Lsat_1_v5_gn_4_36321.1 (PRL1)	-0.59	-0.34	-0.72	-0.63	0.25	0.32	-0.25	0.3	-0.44	-0.51	-0.37	-0.3	0.38	0.56	0.29	-0.04	-0.2	0.37	-0.01	-0.32	-0.2	-0.1	0.94	-0.22	-0.14	-0.14	-0.32	-0.39	0.19	0.16	0.68
Lsat_1_v5_gn_4_41960.1 (PP2A-4)	-0.61	-0.39	-0.58	-0.39	0.3	0.33	0.15	0.18	-0.27	-0.19	-0.17	-0.2	0.2	0.43	0.24	0.08	0.01	0.09	-0.13	-0.19	-0.17	-0.07	0.45	-0.27	-0.12	0.0	-0.13	-0.26	0.14	0.09	0.58
Lsat_1_v5_gn_4_52360.1 (ARPC1)	-0.79	-0.62	-0.48	-0.4	0.17	0.31	-0.17	0.03	-0.45	-0.26	-0.3	-0.27	0.06	0.83	0.51	-0.24	-0.23	0.61	-0.14	-0.54	-0.15	-0.0	0.53	-0.33	-0.31	0.04	-0.23	-0.38	0.42	0.37	0.61
Lsat_1_v5_gn_5_113361.1 (EMB2745)	-0.87	-0.82	-0.94	-0.61	0.03	0.1	0.1	0.07	-0.32	-0.45	-0.2	-0.33	0.26	0.67	0.48	0.07	-0.05	0.58	0.18	-0.3	-0.14	-0.21	0.59	-0.16	-0.1	-0.14	-0.13	-0.34	0.18	0.14	0.77
Lsat_1_v5_gn_5_120921.1	-0.81	-0.81	-0.53	-0.56	0.24	0.19	-0.15	0.07	-0.32	-0.43	-0.15	-0.35	0.25	0.51	0.4	-0.11	-0.19	0.58	0.11	-0.13	-0.27	-0.24	0.7	-0.12	-0.18	-0.01	-0.11	-0.42	0.2	0.19	0.77
Lsat_1_v5_gn_5_124780.1 (TAF6)	-0.77	-0.85	-0.8	-0.57	-0.09	0.25	-0.15	-0.01	-0.44	-0.39	-0.08	-0.3	0.38	0.76	0.53	0.05	-0.06	0.46	-0.1	-0.42	-0.48	-0.31	1.08	-0.16	-0.4	-0.36	-0.15	-0.24	0.17	0.27	0.77
Lsat_1_v5_gn_5_41801.1 (TRM8a)	-0.58	-0.64	-0.91	-0.92	0.03	0.23	-0.04	0.07	-0.5	-0.54	-0.37	-0.3	0.39	0.52	0.48	0.01	-0.04	0.41	0.0	-0.23	-0.2	-0.13	0.8	-0.08	-0.07	0.01	-0.06	-0.07	0.18	0.06	0.68
Lsat_1_v5_gn_5_68521.1	-0.58	-0.39	-0.51	-0.61	0.2	0.32	-0.12	0.18	-0.46	-0.27	-0.41	-0.44	0.31	0.68	0.31	-0.15	-0.22	0.66	0.01	-0.34	-0.17	-0.1	0.72	-0.03	-0.21	-0.14	-0.1	-0.19	-0.14	0.06	0.59
Lsat_1_v5_gn_6_13361.1 (SPT16)	-0.63	-0.33	-0.71	-0.69	0.26	0.1	0.11	0.37	-0.45	-0.42	-0.4	-0.25	0.49	0.73	0.37	-0.05	-0.13	0.47	-0.14	-0.32	-0.32	-0.29	0.73	-0.29	-0.22	-0.31	-0.26	-0.43	0.1	0.15	0.82
Lsat_1_v5_gn_6_65541.1	-0.66	-0.78	-0.74	-0.68	-0.16	0.04	-0.01	0.28	-0.4	-0.53	-0.3	-0.33	0.53	0.62	0.33	0.2	0.0	0.33	-0.18	-0.2	-0.15	-0.19	0.78	-0.08	-0.04	-0.02	-0.11	-0.29	0.22	0.13	0.65
Lsat_1_v5_gn_6_77201.1 (PDS5)	-0.73	-0.59	-0.81	-0.51	0.19	0.14	-0.24	0.11	-0.53	-0.32	-0.29	-0.27	0.44	0.83	0.59	0.09	-0.12	0.58	0.05	-0.51	-0.4	-0.15	1.0	-0.4	-0.34	-0.19	-0.14	-0.57	0.1	0.06	0.59
Lsat_1_v5_gn_6_90720.1 (Hop1)	-0.53	-0.4	-0.61	-0.83	0.18	0.28	0.08	0.4	-0.58	-0.41	-0.36	-0.39	0.31	0.47	0.33	0.07	-0.03	0.4	-0.02	-0.29	-0.27	-0.15	0.73	-0.33	-0.25	-0.26	-0.33	-0.32	0.2	0.14	0.92
Lsat_1_v5_gn_7_108961.1 (PDI12)	-0.51	-0.3	-0.5	-0.39	0.21	0.29	-0.05	0.08	-0.14	-0.04	-0.04	-0.09	-0.03	0.45	0.42	-0.03	-0.08	0.15	0.03	-0.23	-0.3	-0.06	0.55	-0.23	-0.33	-0.12	-0.2	-0.43	0.31	0.3	0.42
Lsat_1_v5_gn_7_50141.1 (eIFiso4G1)	-0.84	-0.56	-0.82	-0.43	0.21	0.31	-0.0	0.26	-0.33	-0.25	-0.18	-0.14	0.2	0.57	0.26	0.16	-0.08	0.37	-0.23	-0.32	-0.18	-0.12	0.62	-0.22	-0.16	-0.03	-0.01	-0.32	0.22	0.16	0.55
Lsat_1_v5_gn_7_89080.1 (CHB3)	-0.58	-0.46	-0.6	-0.06	0.17	0.05	-0.32	-0.23	-0.33	-0.17	-0.24	-0.22	0.4	0.55	0.48	0.02	-0.16	0.45	-0.09	-0.28	-0.28	-0.19	0.78	-0.29	-0.14	-0.17	-0.12	-0.36	0.12	0.21	0.69
Lsat_1_v5_gn_7_92221.1 (RRP6L3)	-1.63	-1.41	-1.61	-1.35	-0.05	0.01	-0.3	0.35	-0.73	-0.33	-0.39	-0.27	0.49	1.14	0.86	0.04	-0.22	0.91	-0.31	-0.36	-0.43	-0.13	0.7	-0.24	-0.38	-0.27	-0.33	-0.21	0.14	0.02	1.16
Lsat_1_v5_gn_8_2880.1 (CDC5)	-0.79	-0.66	-0.8	-0.63	0.21	0.27	-0.07	0.09	-0.47	-0.37	-0.22	-0.23	0.45	0.75	0.44	0.06	-0.14	0.43	-0.12	-0.29	-0.25	-0.14	0.67	-0.2	-0.14	-0.16	-0.13	-0.34	0.13	0.06	0.76
Lsat_1_v5_gn_8_34141.1 (C3H17)	-0.45	-0.55	-0.48	-0.15	0.19	-0.0	-0.17	0.04	-0.37	-0.36	-0.22	-0.25	0.44	0.69	0.46	-0.01	-0.14	0.61	-0.14	-0.3	-0.38	-0.31	0.98	-0.2	-0.25	-0.17	-0.2	-0.54	-0.1	-0.08	0.64
Lsat_1_v5_gn_8_3740.1 (XPO1)	-0.64	-0.5	-0.92	-0.74	0.33	0.18	-0.28	0.04	-0.48	-0.3	-0.3	-0.22	0.42	0.69	0.4	-0.11	-0.22	0.46	0.03	-0.31	-0.19	-0.15	0.86	-0.32	-0.27	-0.09	-0.23	-0.36	0.21	0.2	0.79
Lsat_1_v5_gn_8_5540.1 (NSRa)	-0.5	-0.52	-0.68	-0.45	0.2	0.03	-0.05	0.01	-0.43	-0.3	-0.34	-0.39	0.15	0.56	0.34	-0.08	-0.06	0.61	0.07	-0.16	-0.09	-0.23	0.71	-0.22	-0.07	-0.0	-0.06	-0.17	0.14	0.19	0.52
Lsat_1_v5_gn_8_89360.1	-0.92	-1.16	-1.14	-1.08	-0.07	0.25	-0.55	-0.15	-0.87	-0.57	-0.42	-0.89	0.51	0.92	0.48	-0.41	-0.31	0.94	0.03	-0.02	-0.1	-0.15	0.97	0.2	0.08	-0.2	0.05	-0.31	0.23	0.14	0.75
Lsat_1_v5_gn_8_97601.1 (RRD1)	-1.07	-0.68	-1.18	-1.25	0.05	0.25	-0.11	0.27	-0.49	-0.39	-0.46	-0.14	0.47	0.69	0.48	0.1	-0.02	0.6	-0.2	-0.29	-0.21	-0.21	0.85	-0.27	-0.29	0.01	-0.09	-0.25	0.22	0.2	0.71
Lsat_1_v5_gn_9_111421.1 (NRPB3)	-0.5	-0.58	-0.65	-0.29	0.07	-0.02	-0.41	-0.41	-0.62	-0.27	-0.29	-0.3	0.84	0.69	0.54	-0.07	-0.16	0.57	-0.42	-0.43	-0.24	-0.1	0.49	-0.25	-0.32	-0.19	-0.35	-0.35	0.23	0.25	1.14
Lsat_1_v5_gn_9_32341.1 (ALADIN)	-0.55	-0.56	-0.58	-0.55	0.23	0.2	-0.13	0.12	-0.38	-0.34	-0.24	-0.2	0.4	0.49	0.22	0.01	-0.0	0.47	-0.01	-0.22	-0.26	-0.12	0.69	-0.15	-0.21	-0.18	-0.2	-0.07	0.02	0.02	0.76
Lsat_1_v5_gn_9_43381.1 (MUB6)	-1.26	-0.96	-1.06	-0.9	0.11	0.39	-0.07	0.35	-0.58	-0.41	-0.44	-0.43	0.0	0.99	0.78	0.09	-0.09	0.57	-0.08	-0.29	-0.37	-0.43	0.79	-0.34	-0.36	-0.18	-0.42	-0.64	0.48	0.56	0.7
Lsat_1_v5_gn_9_45920.1	-0.83	-0.54	-0.72	-0.65	0.22	0.28	-0.04	0.24	-0.55	-0.47	-0.24	-0.3	0.42	0.67	0.39	-0.1	-0.22	0.58	-0.02	-0.29	-0.31	-0.21	1.11	-0.21	-0.27	-0.27	-0.3	-0.43	0.1	0.05	0.63
Lsat_1_v5_gn_9_73101.1 (H3.3)	-0.79	-0.72	-0.72	-0.56	0.21	0.38	-0.1	0.06	-0.35	-0.25	-0.27	-0.27	0.4	0.72	0.45	-0.06	-0.19	0.43	-0.1	-0.25	-0.33	-0.2	0.92	-0.18	-0.16	-0.23	-0.18	-0.38	0.14	0.11	0.57
Lsat_1_v5_gn_9_7900.1	-0.52	-0.41	-0.68	-0.35	-0.03	-0.0	-0.1	0.17	-0.37	-0.29	-0.2	-0.26	0.61	0.57	0.37	0.03	-0.03	0.33	-0.18	-0.19	-0.31	-0.13	0.45	-0.11	-0.09	-0.14	-0.14	-0.09	0.19	0.08	0.67
Lsat_1_v5_gn_9_89900.1	-0.79	-0.76	-0.67	-0.36	0.26	0.18	-0.23	0.09	-0.43	-0.33	-0.29	-0.32	0.5	0.76	0.38	-0.13	-0.24	0.58	-0.06	-0.3	-0.51	-0.4	0.97	-0.24	-0.24	-0.15	-0.16	-0.6	0.08	0.19	0.87
Lsat_1_v5_gn_9_98220.1 (BRP1)	-0.96	-0.62	-0.72	-0.45	0.2	0.03	0.15	0.26	-0.39	-0.26	-0.17	-0.38	0.16	0.67	0.41	0.02	-0.19	0.5	-0.03	-0.32	-0.3	-0.1	0.67	-0.28	-0.25	-0.01	-0.14	-0.24	0.26	0.29	0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.