Heatmap: Cluster_789 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra026301 (SINAT4)
0.15 0.33 0.31 -0.11 0.6 0.75 0.38 -0.34 0.05 -0.31 -0.23 -0.3 -0.34 0.34 0.44 -0.15 -0.19 -0.43 -0.13 0.0 -0.25 -0.36 -0.26 -0.12 -0.0 -0.14 -0.13 0.06 0.09 -0.51 -0.29
Bra036116 (VFP4)
0.36 0.27 0.78 -0.03 0.96 1.06 -0.18 -0.81 -0.06 -1.0 -0.46 -0.25 -1.36 0.99 0.78 -0.24 -0.64 -0.24 -0.4 -0.26 -0.55 -0.22 -0.5 -0.71 -0.6 -1.06 -0.4 -0.2 0.43 0.0 0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.