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Heatmap: Cluster_399 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra023785 (REM25)
 -2.11 -0.21 -0.9 -0.06 -0.5 0.25 0.11 -0.53 -0.77 -0.36 -0.95 -1.19 0.81 0.27 0.67 0.21 1.19 0.52 0.1 0.27 0.23 -1.46 0.53 0.08 0.2 0.15 0.36 -0.34 -0.68 -0.7 0.19
-0.29 -0.51 0.37 0.04 -0.26 -0.15 0.04 -0.28 -0.65 -0.16 -0.22 -0.14 0.75 -0.07 -0.18 0.41 0.42 0.12 -0.13 -0.08 -0.24 -0.11 -0.45 0.24 0.07 -0.01 0.15 0.19 -0.28 0.14 0.32
Bra032808 (KR)
 -0.29 -0.18 0.05 0.11 0.0 -0.14 0.11 -0.41 -0.55 0.22 -0.13 -0.44 0.62 0.04 0.11 0.33 0.47 0.39 0.35 0.09 0.07 -0.17 -0.4 0.09 0.04 -0.01 0.03 -0.05 -0.59 -0.48 -0.25
Bra039835 (CIA5)
 -0.33 -0.04 0.13 0.09 0.03 -0.02 0.01 -0.06 -0.41 -0.22 -0.16 -0.15 0.41 0.17 0.08 0.09 0.25 0.11 0.05 -0.07 -0.02 -0.0 -0.06 0.06 0.07 0.04 0.14 0.07 -0.36 -0.28 0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.