1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_399 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra023785 (REM25)
 0.1 0.38 0.24 0.42 0.31 0.52 0.47 0.31 0.26 0.34 0.23 0.19 0.77 0.53 0.7 0.51 1.0 0.63 0.47 0.53 0.51 0.16 0.63 0.47 0.51 0.49 0.57 0.35 0.27 0.27 0.5
0.49 0.42 0.77 0.61 0.49 0.53 0.61 0.49 0.38 0.53 0.51 0.54 1.0 0.57 0.52 0.79 0.79 0.65 0.54 0.56 0.5 0.55 0.43 0.7 0.62 0.59 0.66 0.67 0.49 0.65 0.74
Bra032808 (KR)
 0.53 0.57 0.68 0.7 0.65 0.59 0.7 0.49 0.45 0.76 0.59 0.48 1.0 0.67 0.7 0.82 0.9 0.86 0.83 0.69 0.69 0.58 0.49 0.69 0.67 0.65 0.67 0.63 0.43 0.47 0.55
Bra039835 (CIA5)
 0.6 0.73 0.82 0.8 0.77 0.74 0.76 0.73 0.57 0.65 0.68 0.68 1.0 0.85 0.8 0.81 0.9 0.82 0.78 0.72 0.74 0.75 0.72 0.78 0.79 0.77 0.83 0.79 0.59 0.62 0.8

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)