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Heatmap: Cluster_243 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
9.52 9.87 4.99 6.37 2.75 1.27 1.55 2.87 1.62 2.11 2.03 2.21 1.41 0.45 0.63 0.96 1.36 0.61 1.38 1.68 1.38 1.31 0.81 3.02 3.56 5.46 3.34 2.18 2.73 4.92 2.35
Bra001043 (BBX3)
 16.62 19.2 20.04 34.82 2.88 4.73 9.98 10.69 4.25 6.93 7.29 4.25 2.79 3.15 2.21 13.51 13.44 1.35 4.54 10.1 9.2 10.22 0.27 2.49 2.01 1.74 2.94 1.27 1.49 0.54 0.45
Bra001182 (TBL10)
 36.98 36.48 36.03 44.59 27.22 22.73 22.75 24.88 17.56 18.58 17.65 17.87 14.74 18.47 18.76 15.73 15.91 9.09 11.4 17.55 16.31 17.88 5.82 17.13 17.28 32.8 16.14 22.33 25.39 20.26 16.9
Bra002374 (PAA2)
 44.54 50.26 50.2 50.24 24.14 31.69 32.78 29.65 25.44 29.07 30.09 29.58 26.92 27.04 24.33 34.43 34.4 19.23 27.37 31.09 29.47 29.07 17.63 28.17 29.79 36.53 30.55 28.33 27.81 27.81 39.02
Bra002510 (TOE2)
 17.38 16.07 15.43 16.85 5.38 5.08 3.49 4.26 4.97 7.36 5.58 8.19 6.78 4.11 4.39 2.98 3.79 4.75 3.52 3.32 3.41 4.71 5.36 6.08 5.41 7.14 5.97 9.0 6.68 11.35 7.13
Bra004045 (BBX27)
 50.51 42.74 42.77 43.19 12.73 10.08 12.32 16.77 20.19 16.04 20.61 21.82 10.42 5.86 5.62 9.13 10.15 5.03 9.13 11.0 11.66 13.35 2.82 13.73 13.37 20.23 13.97 18.85 22.52 19.24 13.96
Bra004077 (HHL1)
 284.63 297.97 291.98 285.73 149.48 177.31 233.25 211.42 175.22 211.44 218.28 210.65 192.37 130.78 129.39 228.91 231.51 107.36 172.11 248.95 236.87 217.86 77.32 157.5 162.44 176.61 165.45 161.18 140.07 149.19 183.06
Bra005302 (OFP15)
 6.77 9.39 10.61 8.09 0.75 0.05 0.56 1.92 0.44 0.74 0.94 1.79 1.64 0.1 0.07 0.48 0.78 1.01 0.4 0.56 0.57 0.44 1.18 1.58 1.4 6.28 2.73 1.42 1.69 3.95 2.97
24.6 23.95 29.36 29.97 6.76 4.58 6.45 7.89 7.94 8.19 9.89 8.49 10.12 3.34 3.65 5.02 4.73 1.8 4.18 8.6 7.96 8.57 9.44 6.8 8.74 10.56 9.1 6.47 8.67 11.98 8.4
141.38 150.35 146.76 165.45 14.33 11.66 53.03 40.82 54.48 35.13 67.93 54.87 20.82 3.78 3.2 30.19 28.32 2.82 9.33 28.32 30.72 47.75 16.31 39.47 51.76 53.9 52.69 35.54 59.14 63.02 40.09
Bra006470 (MIEL1)
 32.02 35.19 39.52 26.5 27.96 22.23 15.37 14.02 18.36 18.82 22.59 16.67 17.46 13.55 11.82 13.99 18.13 7.89 12.48 16.27 12.2 17.7 12.82 12.31 16.21 15.63 15.74 13.24 18.85 14.41 15.5
Bra006851 (GNC)
 6.33 11.69 13.79 6.63 4.56 5.15 3.41 2.57 1.66 3.87 4.29 4.31 2.89 0.64 1.97 2.18 4.46 1.13 3.16 3.65 3.41 4.72 4.58 2.92 3.09 1.34 4.15 1.41 3.18 4.7 6.49
33.73 43.14 30.2 54.45 4.18 4.96 15.12 16.04 9.21 20.06 23.89 24.38 15.48 2.32 3.02 13.6 17.02 1.57 8.4 16.11 17.99 26.5 0.81 4.73 7.84 10.9 10.5 3.02 3.85 7.8 6.92
Bra007819 (GPX1)
 393.8 531.05 545.43 381.64 118.19 143.52 184.84 216.48 168.71 184.32 191.27 214.25 206.72 104.39 98.29 186.29 165.26 70.85 118.21 152.77 189.14 150.96 118.49 205.01 226.34 281.95 238.17 174.94 164.71 283.34 296.5
Bra007937 (JAZ9)
 125.51 149.36 142.44 144.73 10.56 4.6 35.58 47.04 15.93 30.74 26.78 39.01 21.54 2.55 3.7 25.82 33.8 49.66 23.46 18.75 19.11 24.42 16.95 32.31 33.05 48.14 38.33 30.4 17.88 73.84 62.02
Bra008769 (SAFE1)
 72.01 61.73 66.38 61.36 41.88 27.28 28.99 39.56 40.57 31.7 37.17 44.53 27.75 18.4 19.68 17.42 18.69 27.12 25.29 21.42 21.35 25.15 23.22 25.55 26.76 29.72 32.49 43.17 37.38 51.29 45.25
43.48 50.62 45.47 37.46 13.41 7.03 3.38 4.25 11.07 14.7 16.37 16.55 9.88 4.11 5.05 5.74 6.79 11.56 7.62 5.72 11.8 8.87 4.19 4.51 5.17 9.45 7.81 6.86 7.11 16.17 22.7
12.88 12.78 12.34 7.81 2.55 2.04 0.62 0.6 1.1 1.32 2.55 2.82 0.0 0.71 0.54 0.51 0.24 0.8 0.6 0.35 2.25 2.4 0.32 0.95 1.14 2.11 1.17 0.41 1.28 3.32 4.41
19.44 17.63 20.48 16.3 14.62 9.97 9.07 8.8 7.35 9.4 9.75 6.43 9.19 7.2 7.62 9.47 8.54 4.68 6.18 7.68 7.23 9.07 4.42 7.98 9.11 9.41 9.26 9.11 8.89 8.66 12.11
Bra010558 (BEE2)
 74.95 72.87 55.27 76.87 50.12 44.66 35.39 40.33 32.6 39.31 43.9 39.16 30.77 25.73 17.14 42.38 50.19 15.7 25.9 36.47 53.17 48.78 15.78 43.73 48.83 45.42 42.57 42.38 37.75 37.85 46.13
Bra011243 (DLDG1)
 55.71 59.08 55.27 40.19 26.84 18.16 24.9 26.52 25.7 26.05 30.52 26.61 29.07 13.46 21.4 35.63 32.25 17.86 19.02 19.16 24.25 25.94 12.94 17.31 18.75 25.98 22.24 24.81 23.5 38.69 39.87
Bra011656 (J11)
 944.6 1126.93 1167.95 1037.04 106.67 152.24 264.48 198.2 364.33 311.46 399.19 385.77 148.78 95.08 111.41 287.33 136.57 58.1 206.01 376.75 216.45 343.24 65.5 202.23 225.56 548.01 272.93 289.31 369.39 374.93 361.52
Bra013532 (FBS2)
 11.74 12.99 12.48 12.35 5.96 4.24 4.31 5.25 4.82 4.83 4.92 4.65 3.02 2.92 3.57 2.04 2.98 3.87 3.35 4.33 3.51 3.67 2.66 4.76 4.71 6.23 4.7 5.03 5.69 5.56 4.94
Bra014973 (SRRP1)
 112.06 113.28 116.25 127.79 71.77 70.74 87.17 77.09 61.67 85.35 92.29 77.74 63.53 43.84 45.07 78.21 75.44 29.46 55.39 83.35 81.8 78.8 34.33 66.48 71.89 80.77 73.2 77.83 71.63 59.11 71.5
Bra015552 (F2KP)
 17.25 18.14 21.07 16.95 13.6 11.86 11.75 10.32 12.49 12.31 13.51 13.4 11.68 10.13 10.23 13.23 14.47 9.08 10.59 11.86 11.81 11.67 9.07 11.37 10.8 11.41 11.41 11.08 11.19 12.37 15.46
40.95 45.31 28.12 26.63 15.02 7.03 3.78 8.99 6.61 7.34 7.94 18.13 5.27 1.7 0.73 4.09 4.43 1.99 1.24 4.09 6.72 6.9 4.69 6.02 5.49 12.38 8.84 9.29 9.09 25.63 23.71
Bra015879 (FAB1)
 42.03 36.59 33.84 31.06 11.87 9.93 15.83 22.61 11.87 14.77 14.38 20.48 16.75 6.13 7.53 13.18 14.3 12.76 10.47 13.89 16.29 14.52 16.99 16.44 18.13 19.05 21.12 19.99 14.27 30.62 26.63
Bra016096 (SPI-1)
 30.24 50.97 35.34 25.37 8.61 12.88 8.97 5.74 8.32 10.61 12.05 11.95 10.73 10.79 3.41 8.52 8.6 0.8 6.0 8.15 8.85 9.15 2.92 8.34 7.8 11.53 7.15 4.4 7.27 9.33 8.64
131.83 119.78 113.9 128.15 105.41 71.38 86.98 118.15 64.37 63.75 58.03 70.35 67.04 60.37 44.39 44.31 51.08 61.67 53.51 53.69 52.11 57.97 28.64 68.54 73.0 89.4 74.73 88.68 82.37 92.68 84.08
Bra017435 (CP5)
 630.49 740.3 1003.36 818.31 165.97 236.47 274.19 298.82 283.97 263.42 314.35 296.12 212.46 167.4 142.73 214.42 232.13 153.1 186.81 247.9 243.04 236.29 116.57 254.27 291.89 449.49 282.95 265.1 324.41 308.27 372.63
191.44 164.82 150.65 151.29 88.35 68.98 66.77 90.98 93.88 73.71 81.78 104.54 48.88 38.21 38.74 43.56 49.75 33.14 54.62 52.7 50.88 62.53 19.19 57.33 62.83 73.52 74.88 87.17 90.04 115.58 78.37
Bra020293 (RIBA3)
 40.48 44.98 45.31 37.37 10.71 13.28 24.95 23.27 18.17 24.06 30.36 30.86 24.11 9.15 6.43 22.02 26.45 12.94 21.77 27.73 25.15 27.1 11.42 14.49 18.11 26.02 19.51 8.59 12.5 16.71 21.39
Bra021733 (GUN1)
 43.14 47.26 53.47 46.5 28.62 27.97 28.57 29.07 28.93 33.48 32.95 32.37 31.66 25.87 28.09 34.6 33.71 25.09 26.24 30.25 28.39 29.32 20.81 28.38 30.49 32.17 32.34 31.73 35.13 34.02 36.95
Bra022354 (ATL77)
 10.24 10.18 10.68 7.99 2.81 3.75 4.32 6.23 4.15 5.4 6.45 6.82 3.02 1.53 1.81 3.89 4.65 1.31 2.74 5.22 3.75 5.26 1.54 2.41 4.22 7.82 4.4 2.34 2.53 5.19 2.34
865.69 1788.23 2067.97 1596.78 83.14 77.62 107.88 79.57 64.16 266.98 180.06 103.36 158.08 8.67 113.9 283.11 328.8 314.25 196.66 288.19 259.56 534.05 122.29 83.59 104.31 721.39 105.31 37.91 49.77 250.51 170.13
93.57 62.94 134.07 88.07 27.75 23.98 31.33 33.32 51.45 49.85 53.87 46.55 35.84 29.68 33.26 39.74 48.11 31.5 33.84 46.16 38.1 38.52 19.82 29.06 29.79 42.8 33.93 19.31 33.27 59.81 73.28
Bra023908 (RBL)
 23.02 27.95 29.48 30.22 13.83 9.7 8.27 12.51 13.14 10.91 11.72 12.56 9.15 8.16 7.67 8.46 7.99 8.06 8.34 8.99 8.77 8.99 6.91 8.97 8.6 11.61 9.56 11.46 11.59 17.27 16.99
109.5 114.5 173.02 104.8 71.95 57.64 76.98 86.47 56.38 69.45 70.25 69.86 66.67 41.88 48.99 58.93 62.15 37.75 48.41 68.76 67.73 69.12 31.66 56.85 59.13 59.85 61.6 69.21 57.92 67.7 60.0
Bra024968 (LON2)
 146.76 148.16 141.52 174.14 53.98 44.99 53.61 48.75 75.82 63.6 75.54 79.15 46.24 34.34 29.19 47.63 48.46 14.83 37.57 55.89 50.2 56.9 18.1 38.58 43.24 57.91 45.35 46.75 57.3 53.03 48.35
Bra026029 (HCF173)
 148.84 141.47 179.65 166.56 49.69 67.25 88.27 71.07 67.81 80.39 103.27 82.77 73.43 44.02 42.84 88.51 81.21 33.5 59.05 95.24 89.79 89.89 37.32 68.69 84.66 94.41 86.9 57.46 72.94 60.43 62.93
34.22 41.42 33.01 35.82 2.86 1.98 10.01 11.79 7.8 11.2 16.87 17.0 7.68 1.53 1.7 5.62 6.5 1.58 2.33 8.87 7.86 9.7 1.73 5.51 6.64 10.43 9.27 5.63 6.46 10.12 9.93
20.07 21.46 39.72 22.14 6.7 5.45 7.9 10.11 7.0 9.7 8.66 9.89 6.41 4.23 4.4 8.52 9.11 4.79 5.25 10.53 10.53 10.3 3.46 7.86 8.39 8.28 8.01 10.2 9.03 9.29 11.41
44.6 50.13 55.1 44.86 17.91 10.36 12.51 24.09 14.91 16.09 17.93 24.59 13.9 6.96 9.65 7.67 10.5 10.25 8.21 9.9 12.48 10.05 15.15 18.47 19.04 24.16 23.65 29.16 23.24 31.79 33.97
Bra026893 (PGL1)
 47.75 63.84 47.94 54.56 3.28 2.23 12.64 19.03 10.72 15.81 19.02 17.72 21.71 0.85 1.75 14.52 12.99 4.25 3.55 10.3 10.66 10.7 6.13 12.84 14.45 31.36 16.88 7.5 8.95 23.96 22.95
Bra027604 (UMAMIT1)
 7.03 7.78 6.71 6.79 3.34 2.62 2.78 2.64 2.92 2.71 3.61 2.3 2.37 1.95 1.34 1.9 2.79 1.62 2.9 2.88 2.45 2.19 3.22 3.29 2.82 2.68 2.92 2.44 2.41 3.07 3.04
Bra027685 (PGD1)
 31.1 32.8 45.78 26.32 10.18 7.16 8.89 23.22 11.25 11.75 12.76 15.57 13.0 5.6 10.81 7.62 6.49 16.23 9.19 8.5 9.12 9.64 13.93 9.56 11.68 14.3 12.85 14.2 10.37 26.3 16.44
21.66 23.71 27.9 22.93 5.04 4.12 4.02 4.4 5.57 6.0 7.92 6.52 6.94 2.92 2.18 4.01 4.65 3.93 1.95 3.87 3.7 4.23 3.94 2.66 3.43 12.3 4.11 4.31 4.49 5.77 6.1
Bra028288 (ATSDH)
 199.27 310.2 285.46 244.91 88.59 107.0 98.22 75.16 121.11 84.01 142.1 117.43 77.91 92.91 86.82 97.03 78.29 34.75 75.01 100.4 100.79 115.86 36.69 90.4 100.06 113.89 108.56 68.08 129.28 110.9 164.04
Bra028478 (CLCA)
 46.45 85.74 59.27 65.22 1.25 0.92 11.38 9.68 4.46 16.6 14.92 13.23 19.87 0.42 0.48 14.07 19.0 18.61 7.52 13.33 13.44 18.84 16.06 7.75 13.34 47.97 14.97 2.29 3.48 11.34 17.31
17.37 18.87 25.08 18.75 11.18 10.15 9.65 12.32 9.55 10.29 10.54 9.71 10.7 8.52 7.67 9.74 10.65 7.1 8.07 10.81 10.79 9.76 5.09 8.7 10.37 11.1 11.15 10.09 10.53 10.47 13.77
Bra029488 (RbcX1)
 171.41 160.56 154.64 120.87 118.48 63.75 37.21 58.71 92.55 83.48 86.86 110.2 32.6 32.4 42.91 36.85 40.36 37.86 58.23 53.16 51.84 69.93 23.61 58.95 50.19 59.24 68.97 93.11 92.15 150.58 100.09
30.61 28.97 38.55 36.51 9.21 15.51 9.33 6.39 7.28 11.37 13.62 11.6 7.07 6.86 6.37 10.83 9.73 3.73 8.0 15.54 13.76 17.09 2.06 5.06 3.76 14.11 5.35 2.3 5.38 3.18 2.34
40.4 54.63 65.18 41.07 15.45 14.73 19.77 12.64 12.64 16.83 13.42 16.78 11.72 14.5 11.11 12.96 16.77 9.07 15.09 16.89 13.06 14.29 9.81 26.15 27.43 26.39 28.54 24.24 28.11 32.2 29.2
Bra034141 (ARAF)
 33.03 36.21 31.42 28.3 17.13 14.6 10.4 8.5 15.79 14.96 19.81 17.52 7.97 11.91 13.46 11.93 10.89 8.49 9.49 11.96 9.57 13.8 7.35 12.18 14.45 13.25 14.66 14.03 16.2 19.26 19.96
8.67 9.0 11.62 9.75 5.57 4.63 2.55 4.42 2.99 2.64 3.2 3.44 3.02 3.99 3.08 3.89 2.75 1.95 3.77 2.67 2.79 3.31 1.0 3.72 3.67 4.22 3.12 3.61 4.08 4.1 4.75
61.09 72.15 85.67 87.83 34.34 24.11 18.67 17.51 27.09 23.27 26.2 28.92 26.65 15.37 13.27 16.21 17.11 16.6 19.17 18.48 18.78 21.86 11.37 21.47 23.53 47.85 24.76 16.21 27.64 30.77 37.21
19.47 15.05 14.58 11.15 5.28 3.53 4.95 4.09 3.1 2.88 3.66 3.03 3.24 0.87 0.65 2.67 3.23 0.62 1.06 2.66 2.56 2.59 0.94 3.07 3.91 4.85 3.7 3.07 4.43 4.38 8.4
Bra037880 (HY4)
 175.61 185.15 179.25 175.73 60.44 69.08 48.19 50.06 74.97 53.75 73.92 62.89 42.72 53.35 50.36 51.95 49.03 34.08 51.06 51.63 51.58 54.07 24.78 50.35 55.49 81.48 58.22 67.23 83.71 71.91 73.91
Bra038340 (PHYLLO)
 13.29 11.97 11.2 12.0 8.28 8.19 8.03 8.26 6.1 6.62 6.47 7.41 6.83 6.67 6.37 7.43 7.44 3.86 5.15 6.91 6.44 5.66 4.48 6.25 7.09 8.86 8.4 7.34 7.33 7.62 9.43
Bra039048 (VHA-d2)
 38.49 44.58 51.3 34.92 18.61 12.62 15.11 13.06 9.88 9.27 12.92 12.85 9.5 8.77 6.22 9.14 9.04 9.45 8.65 8.15 8.29 7.93 8.21 18.15 18.94 21.2 20.94 21.58 18.87 26.76 20.31
Bra040483 (MYC70)
 1.06 0.82 2.28 0.77 0.07 0.01 0.22 0.29 0.57 0.55 0.64 0.38 0.19 0.04 0.03 0.3 0.43 0.26 0.28 0.4 0.31 0.5 0.35 0.1 0.18 0.26 0.19 0.04 0.12 0.7 1.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)