Heatmap: Cluster_197 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000171 (TBL28)
18.1 17.37 20.36 21.97 11.21 7.04 10.17 11.96 11.16 12.72 13.72 12.64 10.05 8.81 8.3 11.03 9.91 11.9 8.56 10.02 10.06 11.09 6.52 10.16 10.06 21.16 12.54 12.28 11.4 13.01 11.27
Bra000377 (DRN1)
3138.96 3128.79 3751.53 3110.12 629.73 109.09 943.69 1943.56 365.98 677.59 660.12 779.09 1097.84 83.31 49.77 254.1 533.59 1417.32 268.95 391.62 628.81 315.15 421.81 415.62 482.09 1648.76 616.85 1015.1 611.23 782.46 273.52
13.41 18.03 15.89 18.48 3.93 2.68 7.08 10.94 6.92 6.67 6.55 8.71 5.32 1.91 2.09 3.71 3.64 4.33 4.01 4.81 4.52 4.68 4.16 5.21 5.03 6.68 5.81 6.88 6.96 5.07 3.57
249.13 280.29 326.87 264.3 147.13 127.87 182.46 192.91 191.07 190.25 195.58 207.38 216.73 113.1 92.51 173.67 198.06 116.55 150.66 168.83 182.06 173.06 68.78 166.61 174.74 184.59 193.76 153.16 146.49 206.67 223.65
Bra000953 (PRPL5)
55.38 81.57 105.42 105.8 22.34 22.78 38.49 44.7 23.41 42.79 37.1 37.11 60.51 10.73 11.45 36.88 36.65 30.7 16.23 31.2 34.24 30.84 32.62 32.88 33.68 35.77 35.86 41.58 24.02 29.3 40.03
42.25 36.27 32.85 36.16 25.97 17.16 16.02 16.71 18.43 20.67 22.05 24.73 13.62 9.63 9.79 18.59 18.65 9.61 11.74 17.36 19.19 19.91 5.88 14.35 16.28 32.64 19.05 20.02 19.0 20.91 15.19
Bra001535 (FLU)
59.93 69.57 71.54 74.19 41.61 30.39 40.72 55.34 21.23 41.97 45.37 44.61 55.89 25.61 24.63 34.57 44.24 25.36 34.62 36.97 35.83 32.08 31.61 40.37 42.05 43.3 44.01 38.94 30.88 44.86 53.32
Bra001626 (AQP1)
61.32 264.4 286.73 347.54 7.29 0.08 33.1 68.56 18.77 37.56 37.21 35.47 92.25 6.47 2.97 29.58 18.44 50.71 6.88 20.68 22.21 13.96 11.96 13.74 13.95 66.32 15.48 21.51 13.87 25.33 13.03
Bra001704 (EMB1865)
33.42 39.26 36.23 34.83 17.37 14.04 21.46 26.48 10.54 18.71 15.58 18.27 25.14 10.25 10.53 16.5 20.88 16.4 12.35 17.69 18.06 16.97 15.2 19.85 21.99 25.07 23.59 21.53 16.02 21.7 34.52
Bra003053 (TL17)
171.18 226.17 278.09 246.23 92.0 76.69 184.34 233.38 107.52 151.23 129.83 190.6 217.2 45.42 47.39 150.7 168.96 107.86 124.97 156.19 154.21 168.4 70.58 182.67 184.65 201.65 215.8 125.23 115.01 180.48 216.83
Bra004149 (TMK1)
53.33 52.37 46.96 57.26 32.84 27.81 31.49 38.15 29.49 30.51 33.88 36.55 35.96 23.43 19.73 29.13 29.11 20.51 24.06 29.68 30.83 26.72 18.32 26.49 29.12 59.85 29.05 33.44 32.39 38.15 35.71
Bra006206 (SULTR4;1)
14.34 20.4 18.9 14.87 4.82 10.38 26.42 29.22 7.18 10.75 10.91 10.4 10.54 10.12 10.5 11.83 8.3 11.46 11.81 9.08 9.7 12.6 4.05 14.31 15.27 14.09 14.59 10.25 6.74 10.9 11.28
Bra007589 (REM1.2)
120.31 167.02 219.27 190.26 87.57 55.24 66.72 104.63 38.71 55.8 48.09 38.15 95.47 83.11 73.21 64.49 68.17 73.0 38.7 52.67 52.15 41.17 26.52 41.61 40.36 112.78 38.82 76.15 55.62 30.63 34.57
Bra007733 (RRF)
46.46 43.91 55.15 47.81 26.51 18.95 22.19 35.14 21.72 25.62 29.84 24.58 35.33 15.52 13.56 27.38 25.5 23.42 15.62 22.97 23.32 15.57 13.85 20.39 20.68 23.83 16.78 26.77 18.87 19.59 29.14
Bra007994 (HISN6B)
29.14 21.64 23.1 29.44 7.1 8.96 24.72 30.64 12.97 17.03 21.24 18.14 21.81 5.29 7.33 17.25 20.61 13.22 13.56 22.72 17.0 21.65 10.42 17.07 17.85 18.9 16.89 14.61 12.29 16.37 15.53
Bra008663 (TBL19)
50.41 60.47 67.57 65.96 14.51 20.45 29.43 31.19 32.03 35.21 43.09 41.81 34.37 17.99 11.86 31.78 30.97 19.31 27.45 29.83 33.9 30.93 17.02 24.02 28.64 51.97 31.34 28.13 30.11 34.73 34.94
10.76 11.7 14.87 17.91 4.51 1.96 5.58 5.72 4.04 4.56 5.11 4.62 5.37 4.11 3.99 5.6 6.11 5.26 2.5 3.76 3.13 4.02 1.67 5.08 5.7 13.45 5.57 4.8 4.57 10.09 9.09
Bra010475 (ACP4)
62.4 50.36 55.43 55.46 21.9 21.7 40.05 57.6 21.53 25.83 24.83 29.88 41.72 9.98 12.24 25.53 34.46 14.9 14.92 28.36 32.98 24.54 10.35 21.64 24.01 28.21 26.54 23.27 16.88 18.59 24.68
Bra010820 (GGL6)
100.77 144.65 145.93 155.59 56.25 21.7 57.59 69.43 54.64 82.67 72.79 58.66 70.78 45.71 37.47 66.54 86.75 99.0 43.01 45.45 41.95 47.23 24.45 33.57 39.41 109.14 39.57 36.64 36.72 64.94 60.4
Bra010821 (GGL5)
37.01 48.98 50.09 83.72 11.83 3.69 11.2 17.63 8.6 19.48 17.64 20.0 21.78 4.27 2.4 15.12 23.31 18.66 5.83 8.48 10.98 10.93 13.15 3.69 4.96 25.89 9.23 4.27 3.64 13.76 8.36
Bra010852 (PRPL34)
409.93 429.26 502.0 487.45 279.19 232.01 369.76 422.6 252.36 323.38 213.8 318.22 402.03 177.96 195.2 259.79 309.34 191.0 193.47 295.23 331.6 260.94 151.23 305.66 318.45 362.08 334.14 334.72 265.14 280.46 334.24
25.11 20.67 20.79 23.18 13.62 13.54 17.91 16.42 9.51 10.78 11.18 10.43 15.49 9.64 8.66 11.88 12.31 11.33 11.7 10.84 11.12 11.86 5.77 10.65 12.57 13.08 9.9 12.59 11.05 7.19 9.36
Bra012595 (CH42)
140.03 121.6 137.23 160.75 64.74 55.99 118.92 173.56 56.46 101.75 99.02 86.93 112.72 25.46 34.95 73.63 87.49 47.3 64.54 89.96 91.79 90.41 36.53 77.61 84.55 84.74 89.05 79.22 60.53 88.79 114.29
283.23 284.87 271.45 302.32 227.18 214.64 267.44 284.67 188.07 223.46 212.62 220.2 251.87 167.2 150.65 203.05 234.68 193.67 173.41 221.0 224.53 218.61 114.83 208.41 217.93 215.15 225.59 245.08 229.47 261.47 311.99
Bra012812 (PDE191)
24.88 24.14 24.33 25.36 10.99 7.79 16.74 18.25 7.83 11.61 12.22 10.68 25.4 7.25 6.9 13.79 12.38 11.95 6.95 12.0 11.97 8.51 9.99 12.92 13.18 19.01 13.67 13.13 9.56 11.13 16.69
Bra013394 (PAE7)
60.19 78.57 76.13 66.22 12.07 9.3 21.18 21.79 12.51 20.89 22.36 15.41 26.37 11.4 9.59 15.69 15.02 34.89 15.3 17.87 19.14 17.08 23.12 20.23 23.02 32.09 24.15 27.43 27.01 23.2 17.44
Bra014254 (HKL1)
6.29 9.93 10.29 5.26 0.54 0.58 1.98 2.48 0.67 1.9 1.25 1.36 5.24 0.44 0.46 1.32 2.71 5.95 1.19 1.2 0.98 1.28 0.96 0.59 0.75 3.0 0.7 0.35 0.26 0.92 1.26
412.13 443.7 439.56 511.96 306.82 345.78 492.52 521.48 270.38 331.09 355.14 395.49 423.78 261.9 241.53 347.6 356.2 224.27 296.94 349.61 380.48 375.21 184.69 358.66 372.51 366.48 415.03 311.17 289.9 391.03 410.35
Bra015896 (CPK30)
5.61 5.57 8.41 9.03 5.13 3.26 3.99 2.96 2.16 3.75 3.42 2.34 4.0 2.64 1.99 4.33 4.32 3.07 2.23 3.45 2.36 2.87 1.1 2.86 3.01 6.49 3.1 4.65 4.53 4.87 3.92
Bra016047 (GER1)
1510.86 1812.08 2187.11 2477.0 618.98 97.22 661.18 1529.66 368.54 858.84 721.29 824.05 968.33 133.01 64.68 532.46 869.05 1021.93 289.84 325.1 447.43 353.18 169.72 306.8 357.24 1318.34 547.63 591.79 403.32 1305.24 638.63
Bra016989 (HEME2)
74.0 71.17 83.0 120.07 42.92 38.4 73.94 100.48 45.71 82.13 66.65 83.58 90.52 22.58 23.31 56.17 78.73 46.74 42.38 58.08 60.29 60.56 44.26 53.54 55.67 59.8 62.43 63.49 40.67 69.95 78.49
Bra017269 (SL1)
30.66 35.22 41.8 43.56 18.71 18.25 30.37 35.86 24.59 30.27 27.2 33.52 34.39 15.9 16.14 26.88 28.72 16.51 17.4 27.97 25.03 26.22 12.12 27.9 26.56 30.81 31.72 20.7 23.45 25.92 33.69
Bra017418 (TOM3)
12.73 13.44 13.23 18.2 8.1 7.02 5.31 5.43 5.88 6.19 7.2 6.66 7.17 6.73 6.84 7.38 6.27 6.04 6.51 7.43 5.37 6.9 8.08 5.09 5.22 10.77 5.34 5.12 6.85 5.82 5.9
Bra017765 (BEE2)
4.98 6.81 5.22 9.09 1.4 1.7 1.35 1.27 0.75 0.34 0.38 1.27 0.88 0.21 0.02 0.62 0.76 0.59 0.08 1.49 0.49 0.56 0.57 0.45 0.44 0.27 0.39 0.32 0.41 0.3 0.63
18.21 19.58 17.7 18.11 11.08 7.66 5.04 7.48 6.63 8.52 10.69 11.24 4.89 6.61 5.51 7.49 7.19 2.51 7.37 5.52 8.79 8.7 3.28 7.39 7.59 9.55 6.84 9.41 7.97 8.79 4.0
Bra018466 (ERG28)
44.01 54.93 41.28 64.12 26.04 14.41 22.62 20.41 20.93 28.48 26.96 22.49 40.66 13.17 12.47 21.95 31.16 20.56 17.26 23.3 29.12 20.29 11.4 16.7 20.95 37.49 19.95 13.85 13.56 14.89 12.98
10.97 11.9 11.45 13.25 2.02 1.08 5.0 6.84 3.91 4.8 7.43 9.27 9.53 2.28 1.7 4.92 4.67 5.03 2.88 5.33 5.29 4.81 2.94 3.71 4.22 11.29 4.57 3.83 3.87 5.29 7.29
Bra020038 (PHGAP2)
24.82 22.26 20.68 29.69 13.2 12.56 19.43 23.21 16.94 19.78 19.07 21.08 18.64 10.84 11.95 17.01 18.6 12.3 13.28 16.44 14.64 15.92 5.25 15.08 15.26 22.18 16.25 15.94 15.7 16.61 16.5
Bra020975 (ERD3)
10.4 11.12 9.59 7.52 7.29 4.18 4.35 5.63 4.9 7.64 8.18 7.19 5.48 2.74 2.34 5.65 6.68 5.06 3.11 5.79 6.29 4.75 3.18 4.78 6.47 12.2 6.2 5.68 4.72 4.88 4.72
Bra021037 (GRF5)
22.33 24.13 32.32 52.34 9.1 5.76 21.43 21.04 16.49 29.95 18.7 39.39 32.32 3.42 4.87 17.57 19.31 10.13 4.12 9.64 13.7 11.95 6.57 15.58 16.5 21.33 16.15 25.3 7.26 13.04 20.19
Bra021171 (AQP1)
75.17 103.09 109.0 142.78 15.46 5.35 23.96 68.86 35.0 48.54 33.63 51.57 109.92 13.35 10.65 26.85 36.51 48.78 8.12 24.19 27.02 16.34 33.4 27.53 29.62 69.15 30.95 29.71 32.8 67.56 74.88
Bra021386 (BOR1)
5.57 4.42 5.96 3.34 6.42 2.47 1.44 1.51 2.33 4.11 2.89 2.59 3.83 3.23 2.66 2.71 3.01 1.74 1.89 2.44 2.16 2.1 0.64 1.35 1.66 12.15 2.16 2.1 2.86 3.8 2.42
Bra021450 (DEG2)
59.65 58.38 66.49 66.1 39.99 33.58 41.27 46.57 42.55 50.23 49.17 53.3 65.05 31.47 27.9 44.91 46.24 31.18 33.96 41.31 43.29 40.43 28.04 36.36 39.29 44.73 44.02 44.07 38.26 45.27 54.08
79.19 90.36 137.97 141.28 33.94 23.45 34.52 60.39 46.74 53.67 57.33 54.63 38.33 24.19 18.79 24.29 26.59 23.03 16.21 35.47 35.26 43.49 22.22 26.35 30.0 81.84 39.26 22.78 39.27 40.16 29.95
Bra022058 (PLATZ11)
1.91 4.31 5.91 2.31 0.13 0.0 0.79 0.88 0.21 0.39 0.38 0.45 0.91 0.02 0.06 0.17 0.09 0.19 0.11 0.2 0.1 0.05 1.26 0.61 0.7 1.16 0.47 0.94 0.49 0.79 1.74
Bra022805 (RPT2)
20.9 27.22 33.47 43.34 6.71 6.57 9.99 16.27 14.0 10.49 13.96 13.98 6.18 1.55 2.1 5.65 7.0 1.75 5.01 8.28 7.98 10.03 0.88 8.78 9.87 19.34 10.62 5.11 12.18 15.06 7.61
5.39 5.92 6.72 7.9 2.81 1.75 3.96 4.96 3.26 3.87 3.41 3.65 5.65 2.78 1.89 4.13 4.07 3.3 3.02 3.26 3.14 2.97 2.01 3.3 3.5 5.37 3.94 3.64 3.6 3.68 3.67
Bra023563 (CAC1)
44.12 47.93 62.1 47.37 18.14 11.02 22.98 29.87 10.09 19.2 18.11 15.31 38.5 13.45 15.68 22.13 27.76 24.72 18.42 18.3 20.02 16.44 19.75 28.42 34.38 45.88 34.51 21.6 18.19 27.96 38.52
55.31 61.61 78.4 63.21 32.01 14.94 26.44 46.25 20.15 32.03 25.97 29.15 38.67 24.2 19.54 26.86 30.99 33.0 19.45 22.13 31.01 23.75 19.82 24.21 27.43 42.89 29.72 31.55 24.92 28.65 30.57
Bra028175 (RBCS3B)
249.92 294.27 297.15 334.76 47.91 41.39 204.22 195.28 57.77 104.34 117.68 102.06 93.78 24.62 16.0 101.09 134.2 43.19 55.57 86.09 88.56 71.35 22.33 89.07 108.13 141.75 101.74 195.47 111.27 192.41 189.94
17.07 20.06 19.43 22.77 7.32 6.57 12.27 13.87 6.04 10.26 11.44 10.47 12.16 3.62 4.18 11.4 12.98 5.59 5.18 10.53 12.08 8.67 3.89 8.5 9.88 14.18 11.23 7.22 7.47 11.4 14.55
Bra030628 (ELP)
194.97 250.11 265.73 255.09 140.21 92.2 146.44 170.65 140.7 200.29 176.48 193.73 182.38 149.25 146.4 183.59 201.24 209.21 173.38 171.47 166.4 154.32 65.29 147.67 161.4 211.3 159.28 133.89 120.23 117.16 127.91
Bra030923 (SRF6)
20.74 28.52 18.33 37.96 7.62 4.72 4.89 6.77 3.87 5.49 4.86 4.56 9.92 5.92 4.17 5.74 6.54 7.02 4.0 4.17 4.95 4.11 6.2 3.4 4.01 8.46 3.82 3.56 4.25 4.36 5.13
5.5 5.7 9.83 6.65 2.31 2.03 2.31 2.55 2.18 2.5 2.56 2.91 4.17 2.47 1.13 2.27 2.4 2.64 1.16 2.14 2.36 2.14 1.72 2.79 2.69 3.17 3.11 2.85 2.63 3.05 3.52
Bra032398 (AAE14)
7.17 8.33 10.17 10.06 2.14 1.65 6.05 10.36 3.77 4.99 5.0 6.84 6.15 1.23 1.05 3.7 3.66 2.43 1.88 3.17 3.14 3.26 2.69 3.39 4.1 4.13 4.02 3.56 3.89 5.62 5.03
Bra033542 (AIF3)
10.53 13.8 16.2 20.74 5.54 0.35 0.43 3.05 1.2 2.76 2.31 2.92 4.87 1.28 0.2 1.58 1.26 3.48 0.7 0.63 0.62 0.48 0.28 0.31 0.2 3.45 0.34 0.56 0.45 2.63 1.84
52.02 51.23 68.55 92.94 30.52 12.55 24.77 47.91 28.83 35.76 34.53 33.92 30.65 13.48 8.72 24.99 35.45 55.54 27.88 22.45 23.95 19.78 14.17 23.72 25.9 77.65 34.66 33.36 39.98 62.29 46.41
Bra033737 (TUB4)
52.53 68.54 66.63 61.12 39.31 25.88 25.3 37.91 23.9 30.5 27.16 27.71 40.54 33.39 27.14 28.51 27.05 39.25 24.07 23.83 25.47 23.65 42.89 26.84 28.85 49.09 29.88 41.05 31.81 37.08 27.6
Bra034128 (SIR)
55.6 55.43 61.26 66.6 21.4 33.48 60.29 70.31 24.78 35.57 35.36 39.17 51.53 27.06 31.76 52.1 40.61 29.58 36.74 37.91 47.04 42.09 15.3 47.17 55.16 55.6 54.27 31.56 25.15 43.82 52.17
Bra034235 (CYP71B4)
12.83 18.44 15.67 20.21 6.33 9.22 4.87 4.6 7.57 4.06 5.93 5.85 2.98 5.53 3.32 1.71 2.22 0.15 3.62 2.14 6.14 4.67 0.22 6.07 6.2 8.54 5.22 6.03 8.2 6.57 5.39
4.6 5.37 4.17 11.0 1.02 0.91 1.14 2.09 0.58 1.24 1.32 0.79 1.13 1.27 0.79 0.94 1.35 1.83 0.98 1.01 1.34 1.21 1.01 0.66 0.58 2.35 0.63 0.85 1.04 0.77 0.81
7.24 8.15 7.47 8.85 1.17 1.13 3.7 4.46 1.38 4.22 4.35 4.57 4.51 0.36 0.35 2.29 2.9 1.23 1.08 2.4 2.02 2.39 1.12 1.07 1.81 6.48 2.4 0.5 0.69 2.71 2.98
Bra036538 (HPAT1)
4.78 6.88 8.35 7.31 2.25 1.12 1.15 1.7 1.71 2.98 2.17 2.13 4.6 2.36 1.83 2.1 2.08 3.94 1.97 1.92 1.95 1.48 3.26 2.7 1.93 3.49 2.83 2.1 1.9 2.84 3.08
Bra036739 (OHP2)
152.7 158.53 148.22 236.07 61.45 88.05 204.26 263.07 89.6 119.69 118.81 148.32 167.66 60.77 70.03 127.01 163.86 110.25 108.89 160.69 147.72 137.83 64.08 140.45 159.58 153.23 172.87 105.97 91.98 100.77 155.92
1722.75 1973.36 2589.2 2654.51 217.36 43.96 885.91 1354.87 374.12 1054.48 669.56 666.94 1745.3 144.2 87.76 1010.11 1218.89 1136.08 386.92 550.2 698.47 534.33 418.15 556.77 635.82 1962.94 787.39 661.02 360.87 739.26 685.42
Bra037997 (NDF5)
27.53 30.27 29.32 27.56 16.93 16.03 21.31 23.78 14.2 18.9 18.34 16.81 23.68 13.14 10.17 19.91 21.56 14.24 16.19 23.27 17.76 17.98 7.65 17.68 18.52 18.29 18.09 20.98 15.11 16.15 24.2
Bra038038 (AIF3)
5.66 7.9 8.45 8.12 1.76 1.27 1.78 1.37 1.77 3.41 3.54 4.35 2.2 1.91 0.98 1.87 2.58 1.9 1.98 3.26 2.82 2.99 0.79 1.31 1.7 4.33 1.9 1.33 1.73 3.36 2.65
Bra038970 (PEL2)
0.2 0.51 0.6 0.74 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0
Bra039206 (ME8)
46.27 66.63 55.56 63.36 4.79 16.93 21.48 65.97 25.47 23.43 24.78 41.94 24.21 4.93 8.56 9.26 12.1 7.54 8.09 9.31 16.41 24.13 4.15 6.99 11.29 13.33 14.8 10.33 16.89 34.43 31.8
32.66 25.42 30.44 29.98 25.19 12.72 14.6 18.32 14.58 22.8 20.53 17.91 16.01 10.14 12.48 18.64 20.4 8.64 11.65 14.24 18.17 16.18 4.79 14.43 16.74 36.7 16.83 15.67 17.53 19.87 16.08
Bra039648 (TUA2)
101.75 152.6 192.0 157.73 27.55 10.01 42.66 97.85 26.05 46.81 32.7 40.7 118.44 27.0 18.57 63.84 64.72 71.42 26.63 37.07 31.16 33.83 39.58 27.37 31.72 50.19 33.05 26.07 15.59 39.28 34.45
Bra041142 (CYP81K2)
59.09 59.11 77.83 123.69 29.96 17.87 68.42 57.66 48.33 75.81 59.24 128.86 111.14 15.74 21.88 41.68 51.14 44.66 12.52 45.16 49.19 44.57 20.58 55.8 64.36 76.33 58.82 61.83 19.17 35.57 53.6

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)