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Gene | Control | Cold (3°C) | Dark (3 days) | Heat (33°C) | Light (435 uEm-2s-1) | Osmotic (100 mM mannitol) | Nitrogen deficiency (0 mM KNO3) | Salt (40 mM NaCl) | Cold-Dark | Cold-Light | Cold-Mannitol | Cold-Nitrogen deficiency | Cold-Salt | Heat-Dark | Heat-Mannitol | Heat-Nitrogen deficiency | Heat-Salt | Light-Salt | Mannitol-Dark | Mannitol-Light | Mannitol-Nitrogen deficiency | Nitrogen deficiency-Dark | Nitrogen deficiency-Light | Salt-Dark | Salt-Mannitol | Salt-Nitrogen deficiency | ZT2 (2 hours after light) | ZT6 (6 hours after light) | ZT10 (10 hours after light) | ZT14 (2 hours after dark) | ZT18 (6 hours after dark) | ZT22 (10 hours after dark) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mp1g01980.1 (IDH1) | 60.11 | 60.55 | 42.51 | 63.31 | 65.83 | 83.86 | 76.27 | 80.35 | 46.21 | 60.68 | 81.37 | 66.2 | 80.66 | 33.48 | 65.68 | 67.31 | 58.92 | 76.61 | 52.81 | 77.83 | 70.37 | 44.26 | 63.53 | 49.28 | 86.2 | 69.8 | 62.35 | 63.84 | 65.01 | 56.12 | 46.78 | 39.2 |
Mp1g07210.1 (CYP716A1) | 6.25 | 13.57 | 0.92 | 8.8 | 3.45 | 6.82 | 11.49 | 4.87 | 1.34 | 5.64 | 27.47 | 11.74 | 38.75 | 2.89 | 11.08 | 15.84 | 10.99 | 7.01 | 1.09 | 9.46 | 8.63 | 1.38 | 9.6 | 1.1 | 10.47 | 9.71 | 4.49 | 3.84 | 5.32 | 3.93 | 3.91 | 2.46 |
Mp1g11740.1 (SKIP16) | 25.54 | 24.7 | 21.02 | 23.98 | 23.64 | 30.49 | 28.0 | 31.76 | 24.14 | 22.31 | 34.31 | 27.8 | 33.55 | 11.73 | 28.75 | 26.03 | 29.4 | 32.62 | 24.11 | 31.41 | 30.63 | 25.0 | 30.01 | 21.84 | 33.03 | 32.0 | 24.42 | 26.19 | 26.91 | 26.14 | 23.99 | 20.06 |
7.9 | 14.44 | 7.14 | 12.44 | 9.23 | 9.61 | 9.44 | 8.44 | 12.45 | 6.48 | 18.19 | 14.0 | 17.52 | 5.91 | 12.4 | 13.84 | 12.39 | 9.63 | 9.71 | 11.82 | 9.91 | 8.32 | 9.96 | 8.25 | 10.52 | 9.55 | 8.59 | 9.26 | 11.4 | 8.34 | 7.93 | 6.12 | |
Mp1g24000.1 (AtHMP13) | 5.67 | 11.62 | 5.22 | 6.7 | 4.58 | 6.7 | 6.31 | 5.9 | 7.62 | 7.2 | 12.21 | 11.15 | 12.75 | 3.46 | 6.9 | 8.54 | 6.34 | 6.95 | 6.83 | 6.66 | 6.67 | 5.21 | 6.86 | 5.93 | 7.82 | 7.11 | 4.88 | 5.89 | 7.06 | 6.07 | 6.11 | 5.75 |
Mp1g24080.1 (OST3/6) | 24.5 | 34.54 | 20.72 | 27.55 | 24.84 | 30.22 | 34.66 | 30.24 | 24.19 | 19.96 | 39.46 | 33.42 | 36.75 | 20.04 | 29.74 | 35.94 | 28.56 | 35.17 | 19.36 | 32.62 | 30.66 | 21.5 | 32.08 | 20.18 | 32.66 | 30.89 | 22.12 | 24.16 | 27.11 | 21.67 | 19.57 | 15.66 |
11.37 | 28.82 | 7.99 | 19.59 | 15.52 | 13.73 | 17.86 | 12.19 | 18.57 | 13.56 | 37.7 | 32.22 | 37.08 | 11.45 | 20.52 | 25.94 | 19.74 | 16.55 | 13.24 | 18.76 | 17.0 | 11.43 | 17.42 | 11.63 | 17.57 | 17.31 | 12.41 | 13.63 | 17.66 | 13.1 | 10.92 | 8.1 | |
65.59 | 143.82 | 43.23 | 89.84 | 81.91 | 94.24 | 99.95 | 76.02 | 65.8 | 57.56 | 138.45 | 131.03 | 143.79 | 39.6 | 99.74 | 114.49 | 88.18 | 102.5 | 83.67 | 113.42 | 88.49 | 64.79 | 89.35 | 69.26 | 96.18 | 96.62 | 62.5 | 71.0 | 81.07 | 52.61 | 47.61 | 51.61 | |
13.87 | 26.34 | 9.79 | 19.05 | 13.45 | 19.46 | 22.9 | 17.36 | 13.47 | 8.52 | 32.77 | 28.03 | 29.9 | 15.29 | 21.65 | 23.52 | 20.13 | 19.09 | 14.8 | 26.54 | 22.13 | 11.9 | 18.83 | 11.29 | 26.19 | 22.66 | 19.11 | 16.18 | 17.4 | 16.96 | 15.92 | 11.87 | |
20.23 | 26.43 | 13.63 | 19.18 | 17.91 | 25.18 | 28.4 | 23.74 | 18.61 | 19.43 | 33.13 | 28.02 | 30.74 | 9.72 | 24.18 | 22.01 | 20.85 | 23.6 | 20.81 | 25.19 | 25.89 | 17.75 | 25.02 | 16.32 | 27.81 | 26.91 | 21.57 | 20.57 | 21.67 | 20.13 | 19.89 | 16.06 | |
Mp2g12880.1 (FBR1) | 37.82 | 127.54 | 26.56 | 62.51 | 32.72 | 59.81 | 53.24 | 46.9 | 63.0 | 44.47 | 165.7 | 111.21 | 152.69 | 18.06 | 74.02 | 70.34 | 63.39 | 48.02 | 32.82 | 70.31 | 67.47 | 29.31 | 49.58 | 33.65 | 80.18 | 64.54 | 37.6 | 43.75 | 58.6 | 48.37 | 39.05 | 27.98 |
Mp2g18280.1 (VP2) | 20.81 | 23.47 | 14.56 | 21.38 | 21.75 | 25.02 | 25.05 | 24.01 | 17.94 | 18.81 | 30.85 | 19.93 | 30.43 | 11.91 | 23.25 | 23.49 | 22.69 | 26.58 | 19.15 | 26.1 | 22.86 | 15.43 | 23.71 | 17.07 | 26.18 | 23.3 | 20.83 | 22.61 | 23.65 | 21.25 | 17.93 | 15.06 |
Mp2g23840.1 (NOP56) | 19.57 | 40.57 | 16.3 | 30.92 | 15.43 | 27.08 | 29.71 | 22.73 | 34.76 | 25.47 | 62.32 | 53.4 | 56.25 | 8.04 | 30.91 | 37.96 | 29.43 | 21.36 | 24.0 | 28.82 | 31.43 | 17.95 | 25.36 | 21.13 | 34.66 | 31.11 | 18.26 | 21.04 | 27.55 | 25.94 | 27.62 | 22.02 |
20.55 | 29.82 | 15.79 | 31.13 | 24.76 | 25.24 | 26.24 | 23.98 | 38.58 | 25.48 | 48.32 | 39.39 | 45.77 | 15.64 | 36.59 | 32.55 | 35.31 | 30.13 | 21.86 | 33.63 | 27.91 | 21.44 | 28.66 | 21.35 | 28.9 | 25.26 | 21.43 | 23.98 | 28.58 | 26.98 | 25.88 | 20.09 | |
18.52 | 34.02 | 13.9 | 21.06 | 22.89 | 26.42 | 26.8 | 22.78 | 18.48 | 18.57 | 33.97 | 27.07 | 33.56 | 10.02 | 21.49 | 26.16 | 21.68 | 24.69 | 16.79 | 26.31 | 22.38 | 14.89 | 24.77 | 15.95 | 25.03 | 20.23 | 19.61 | 20.86 | 22.56 | 19.75 | 16.28 | 14.18 | |
Mp3g10750.1 (XCT) | 7.97 | 17.44 | 3.3 | 13.46 | 8.59 | 10.24 | 7.16 | 8.75 | 5.62 | 9.34 | 20.05 | 12.04 | 20.18 | 4.84 | 15.36 | 11.8 | 13.25 | 8.5 | 6.76 | 12.28 | 9.81 | 5.05 | 8.49 | 4.76 | 11.23 | 8.83 | 9.0 | 7.81 | 8.88 | 9.13 | 10.21 | 8.35 |
2.68 | 4.58 | 1.78 | 4.29 | 2.83 | 4.13 | 3.63 | 3.43 | 3.17 | 2.92 | 6.81 | 4.07 | 6.94 | 0.94 | 5.2 | 5.1 | 4.35 | 2.61 | 2.94 | 4.15 | 3.9 | 2.1 | 3.3 | 2.41 | 4.55 | 3.43 | 2.42 | 2.6 | 4.03 | 3.44 | 3.01 | 2.24 | |
Mp3g24090.1 (PHIP1) | 9.3 | 19.51 | 7.76 | 13.64 | 8.39 | 11.06 | 12.36 | 10.58 | 15.16 | 12.39 | 33.1 | 20.39 | 27.82 | 4.28 | 16.75 | 17.55 | 15.52 | 11.73 | 10.67 | 14.7 | 13.67 | 8.47 | 13.16 | 10.26 | 15.22 | 12.78 | 8.67 | 10.09 | 12.68 | 10.97 | 10.49 | 8.65 |
31.66 | 60.27 | 23.51 | 38.51 | 33.88 | 43.18 | 47.75 | 32.65 | 37.15 | 25.54 | 68.93 | 51.5 | 64.69 | 12.55 | 47.92 | 46.09 | 40.67 | 32.03 | 30.04 | 48.17 | 42.88 | 24.88 | 39.35 | 26.1 | 45.26 | 39.51 | 31.7 | 34.92 | 44.5 | 32.81 | 26.51 | 19.86 | |
Mp4g09960.1 (MEE49) | 10.84 | 20.61 | 7.02 | 15.18 | 15.33 | 14.3 | 14.07 | 12.94 | 9.52 | 10.14 | 27.2 | 17.61 | 26.34 | 7.2 | 17.31 | 17.55 | 15.33 | 14.94 | 10.64 | 20.22 | 15.94 | 9.62 | 16.24 | 9.44 | 17.76 | 15.52 | 13.86 | 12.53 | 15.93 | 11.76 | 12.07 | 8.23 |
Mp4g12110.1 (CHR1) | 2.76 | 12.86 | 3.81 | 6.56 | 6.49 | 5.0 | 10.92 | 5.36 | 5.57 | 15.04 | 27.46 | 21.39 | 40.0 | 5.16 | 7.31 | 12.18 | 8.29 | 11.17 | 4.89 | 13.27 | 8.13 | 4.57 | 17.19 | 3.96 | 7.89 | 10.42 | 9.98 | 5.05 | 2.59 | 1.09 | 1.39 | 2.15 |
Mp4g14670.1 (scpl29) | 10.99 | 14.5 | 1.41 | 11.27 | 10.75 | 11.75 | 10.45 | 17.39 | 1.4 | 4.6 | 26.0 | 11.97 | 22.47 | 2.93 | 8.72 | 13.18 | 10.57 | 16.46 | 2.93 | 11.52 | 12.42 | 2.25 | 14.12 | 2.57 | 14.17 | 14.18 | 13.44 | 10.23 | 8.05 | 7.91 | 5.48 | 4.34 |
9.04 | 24.05 | 7.35 | 22.96 | 9.99 | 13.88 | 14.25 | 10.43 | 18.37 | 13.39 | 47.88 | 30.21 | 43.18 | 5.85 | 30.61 | 31.18 | 25.22 | 13.34 | 16.51 | 22.45 | 20.13 | 12.17 | 16.16 | 12.77 | 22.06 | 18.63 | 9.61 | 11.28 | 14.61 | 13.18 | 12.8 | 8.98 | |
4.93 | 14.79 | 4.72 | 7.9 | 5.77 | 6.75 | 7.47 | 6.26 | 9.21 | 8.84 | 21.44 | 15.64 | 19.61 | 4.08 | 8.73 | 10.92 | 8.06 | 6.8 | 8.44 | 8.94 | 7.81 | 6.68 | 7.8 | 6.72 | 8.64 | 7.32 | 4.87 | 5.86 | 7.34 | 6.93 | 7.07 | 4.77 | |
Mp4g19210.1 (CMAL) | 2.16 | 5.38 | 2.4 | 3.57 | 2.73 | 2.67 | 2.67 | 2.43 | 3.19 | 3.51 | 7.47 | 4.58 | 6.84 | 1.82 | 3.81 | 3.97 | 3.6 | 3.02 | 4.38 | 4.15 | 3.2 | 3.22 | 3.2 | 3.29 | 3.36 | 3.16 | 2.41 | 2.67 | 2.89 | 2.71 | 2.98 | 2.67 |
Mp5g10140.1 (ENP1) | 10.83 | 25.67 | 7.31 | 16.83 | 11.0 | 12.4 | 14.97 | 11.63 | 16.33 | 12.12 | 35.36 | 26.54 | 35.65 | 8.23 | 18.12 | 22.71 | 17.82 | 12.72 | 10.2 | 15.47 | 14.85 | 10.02 | 15.78 | 8.93 | 14.92 | 14.44 | 12.86 | 12.71 | 13.88 | 11.82 | 10.49 | 8.94 |
Mp5g10430.1 (IMB3) | 3.05 | 30.08 | 2.14 | 12.14 | 18.89 | 5.55 | 11.75 | 6.31 | 3.3 | 17.48 | 44.14 | 30.97 | 49.5 | 2.64 | 13.77 | 19.69 | 11.05 | 24.02 | 5.6 | 31.96 | 7.43 | 3.57 | 20.94 | 3.75 | 10.65 | 7.08 | 5.19 | 2.01 | 1.73 | 1.64 | 1.66 | 1.76 |
Mp5g17360.1 (TPR3) | 15.76 | 15.07 | 10.21 | 15.07 | 13.66 | 18.58 | 17.09 | 19.11 | 11.04 | 13.43 | 19.27 | 15.67 | 20.63 | 7.23 | 15.92 | 14.59 | 15.15 | 22.68 | 12.05 | 17.84 | 16.89 | 11.88 | 16.01 | 11.2 | 20.3 | 19.05 | 14.33 | 16.42 | 19.45 | 15.81 | 11.43 | 9.29 |
14.03 | 21.92 | 9.59 | 16.0 | 16.72 | 19.5 | 20.37 | 16.8 | 12.78 | 13.08 | 25.84 | 20.65 | 25.06 | 4.13 | 19.06 | 14.54 | 17.81 | 16.68 | 12.41 | 21.76 | 19.45 | 10.74 | 16.98 | 10.81 | 21.13 | 18.63 | 16.6 | 14.78 | 17.49 | 15.96 | 14.18 | 9.07 | |
12.91 | 15.37 | 3.92 | 13.27 | 12.5 | 15.12 | 13.84 | 14.07 | 4.9 | 12.68 | 18.38 | 16.99 | 21.43 | 3.84 | 10.19 | 13.79 | 12.66 | 22.41 | 6.02 | 16.95 | 13.34 | 5.2 | 15.76 | 6.16 | 15.25 | 16.62 | 12.83 | 12.42 | 14.72 | 10.44 | 9.22 | 7.29 | |
Mp6g14520.1 (TRA1b) | 32.91 | 1424.01 | 3.52 | 444.29 | 293.62 | 146.32 | 223.15 | 108.22 | 12.94 | 986.93 | 2064.33 | 1623.42 | 1783.43 | 36.83 | 487.72 | 1105.69 | 514.77 | 646.78 | 9.87 | 535.65 | 179.45 | 4.84 | 701.79 | 4.4 | 219.56 | 136.51 | 403.87 | 44.05 | 18.76 | 9.02 | 15.5 | 22.02 |
Mp7g05830.1 (ARP) | 6.58 | 16.01 | 5.29 | 12.6 | 10.16 | 9.49 | 8.53 | 8.84 | 7.33 | 8.65 | 25.38 | 13.37 | 25.87 | 4.93 | 14.95 | 13.75 | 13.3 | 12.21 | 6.58 | 16.24 | 10.15 | 6.11 | 12.53 | 4.55 | 11.8 | 9.7 | 8.36 | 8.77 | 9.26 | 7.75 | 7.48 | 5.42 |
5.58 | 12.74 | 5.07 | 10.09 | 5.9 | 7.57 | 8.25 | 6.48 | 10.85 | 6.02 | 17.42 | 11.55 | 16.4 | 4.53 | 12.06 | 12.33 | 10.49 | 6.12 | 9.38 | 9.44 | 8.54 | 6.91 | 7.58 | 7.31 | 9.62 | 8.74 | 6.34 | 6.26 | 8.54 | 8.77 | 8.45 | 6.24 | |
Mp7g13330.1 (SAP130b) | 5.51 | 9.89 | 5.09 | 6.98 | 6.03 | 6.91 | 7.54 | 6.21 | 7.21 | 5.82 | 13.85 | 10.96 | 12.11 | 5.15 | 6.87 | 9.38 | 6.64 | 7.14 | 6.52 | 8.28 | 7.38 | 5.54 | 8.18 | 5.85 | 7.72 | 7.72 | 5.77 | 6.31 | 7.28 | 5.27 | 5.32 | 3.94 |
Mp7g14560.1 (MGT10) | 4.63 | 7.98 | 3.31 | 6.85 | 3.07 | 5.51 | 5.71 | 4.33 | 4.19 | 3.66 | 10.34 | 7.93 | 10.04 | 2.52 | 8.64 | 8.24 | 7.76 | 4.36 | 4.92 | 5.64 | 5.72 | 4.43 | 4.52 | 3.35 | 6.96 | 5.9 | 3.96 | 4.53 | 5.73 | 6.62 | 6.62 | 4.8 |
Mp7g17170.1 (LRX1) | 117.69 | 227.1 | 84.31 | 124.52 | 130.95 | 139.24 | 140.68 | 120.74 | 163.36 | 63.22 | 251.9 | 188.14 | 234.8 | 51.84 | 177.71 | 162.38 | 146.84 | 114.9 | 84.0 | 146.94 | 129.04 | 88.7 | 116.37 | 83.42 | 133.98 | 110.16 | 115.65 | 124.18 | 149.96 | 112.42 | 98.32 | 70.51 |
Mp7g19490.1 (MGE2) | 16.72 | 33.43 | 11.17 | 24.04 | 29.73 | 24.56 | 26.29 | 22.47 | 14.75 | 34.67 | 43.92 | 36.75 | 51.22 | 16.3 | 32.43 | 38.1 | 27.13 | 31.8 | 18.2 | 41.37 | 25.53 | 15.39 | 30.53 | 15.09 | 30.79 | 23.86 | 19.55 | 15.54 | 18.37 | 15.96 | 15.36 | 12.53 |
Mp7g19550.1 (NMD3) | 10.92 | 25.91 | 9.63 | 14.48 | 15.59 | 13.38 | 15.15 | 10.86 | 15.16 | 14.95 | 26.92 | 24.95 | 28.63 | 7.77 | 14.58 | 18.7 | 14.38 | 15.05 | 12.27 | 18.28 | 13.23 | 10.48 | 15.8 | 10.11 | 14.21 | 13.47 | 10.19 | 11.85 | 13.54 | 9.37 | 10.59 | 7.96 |
4.41 | 14.05 | 4.32 | 7.75 | 3.77 | 5.88 | 5.57 | 5.08 | 8.54 | 6.22 | 19.53 | 11.66 | 17.35 | 1.78 | 10.11 | 9.47 | 8.54 | 5.16 | 8.48 | 7.49 | 7.02 | 5.65 | 5.54 | 5.54 | 8.13 | 6.48 | 4.59 | 5.19 | 6.36 | 6.09 | 6.31 | 5.06 | |
Mp8g07460.1 (RVR1) | 3.78 | 5.31 | 2.99 | 6.56 | 3.97 | 4.74 | 5.16 | 3.9 | 5.43 | 5.04 | 10.84 | 7.17 | 10.08 | 3.93 | 7.26 | 8.07 | 6.99 | 5.58 | 5.57 | 6.71 | 5.79 | 4.57 | 6.27 | 4.07 | 5.97 | 5.88 | 4.08 | 4.13 | 4.78 | 4.51 | 5.0 | 4.04 |
Mp8g11870.1 (LOF1) | 3.27 | 19.48 | 4.26 | 5.57 | 5.38 | 7.05 | 7.22 | 7.05 | 6.56 | 5.15 | 25.1 | 10.39 | 26.69 | 1.66 | 12.41 | 8.6 | 9.54 | 10.34 | 6.24 | 12.69 | 7.95 | 5.02 | 8.72 | 4.78 | 9.96 | 7.57 | 2.45 | 3.63 | 5.26 | 3.42 | 5.03 | 2.05 |
Mp8g14120.1 (NAF1) | 2.24 | 5.79 | 1.86 | 3.98 | 1.91 | 2.72 | 2.6 | 2.42 | 2.14 | 1.86 | 7.69 | 4.96 | 7.43 | 2.69 | 3.5 | 3.9 | 3.23 | 2.3 | 2.9 | 3.43 | 2.95 | 2.37 | 2.77 | 2.23 | 3.56 | 2.93 | 2.35 | 2.71 | 3.31 | 2.52 | 2.54 | 2.02 |
Mp8g17210.1 (NSN1) | 9.29 | 22.82 | 6.26 | 14.47 | 11.98 | 12.92 | 13.09 | 10.14 | 12.68 | 11.17 | 33.7 | 24.28 | 32.99 | 4.43 | 16.14 | 16.42 | 14.47 | 12.12 | 9.17 | 17.09 | 13.42 | 7.29 | 13.2 | 7.46 | 15.63 | 13.23 | 9.68 | 10.28 | 12.95 | 9.37 | 8.14 | 5.28 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)