Heatmap: Cluster_355 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.1 -0.08 -0.84 -0.0 -0.14 0.17 -0.18 -0.32 -0.21 0.6 -0.16 0.14 -0.3 0.87 0.2 -0.02 0.04 0.2 -0.51 -0.2 -0.65 -0.05 0.46 0.15 -0.22 -0.08 0.52 0.06 -0.6 -0.13
Spov3_chr1.04147 (CYP71B8)
-0.7 -0.82 -0.47 -0.1 -1.66 1.54 -0.26 -0.44 -0.24 0.23 -0.17 -0.19 -1.04 0.96 1.15 0.47 0.46 -1.05 -0.11 -0.0 0.26 0.92 -0.11 -0.88 -0.69 -0.41 -0.77 -0.52 -0.23 -0.56
-1.53 -0.52 -0.98 0.12 -0.31 1.1 -0.11 -1.58 0.22 0.97 -0.57 -1.23 -0.19 1.03 0.54 0.81 0.16 0.56 -0.03 -1.93 0.39 0.37 0.21 0.45 -0.44 -0.71 -0.02 -1.12 -1.16 -0.69
-1.42 - -1.07 - - 2.32 1.44 -1.79 -0.65 0.39 -0.32 0.96 -2.55 0.47 1.45 1.11 0.47 -0.85 -0.86 0.46 -0.12 0.83 -1.51 - 0.21 -0.37 -0.19 -2.67 - -2.92
-2.49 - -4.01 - - 1.41 0.62 -1.41 -0.8 -0.74 -0.07 -0.17 -1.88 1.39 1.67 1.36 0.92 -1.32 0.86 0.64 0.57 1.15 -0.79 0.71 -1.22 -1.38 -0.21 -2.78 -3.01 -
Spov3_chr3.00122 (CYP98A9)
-0.8 -0.53 -0.63 0.41 -0.83 -1.64 -0.09 - 0.18 1.59 0.67 -1.56 -1.93 -0.06 -0.56 0.76 0.29 - 0.79 0.33 0.2 1.2 -0.22 -0.93 -0.06 0.97 -0.86 0.38 -0.05 -1.01
- - -1.15 0.11 - -1.21 -1.01 - 0.21 2.21 -0.7 -0.02 1.17 0.95 -0.23 1.37 1.79 - 0.3 - -1.22 1.94 - - -1.13 0.28 - - 0.52 -1.09
-2.81 - - -2.88 -2.94 1.51 0.33 -0.91 -1.05 -1.27 0.36 0.57 -2.78 1.76 1.32 0.3 -0.36 - 0.62 0.23 1.78 1.33 0.2 0.71 - -1.63 -1.55 -0.43 -1.94 -2.89
-0.33 -0.18 -1.03 -0.34 -0.23 0.48 0.02 -0.61 -0.17 0.26 -1.37 0.09 0.22 0.68 0.34 0.22 -0.1 0.71 -0.12 0.12 -0.01 0.34 0.13 0.11 0.34 -0.5 -0.42 0.11 -0.14 -0.59

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.