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Heatmap: Cluster_86 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
2.02 1.9 0.85 0.72 1.79 1.6 1.18 0.73 0.81 0.86 0.9 0.98 2.17 6.76 1.8 1.54 1.75 16.65 0.98 1.43 0.96 1.23 1.93 0.85 0.78 1.18 0.62 0.8 0.98 1.62
0.22 0.18 0.15 0.01 0.23 0.17 0.08 0.12 0.06 0.07 0.08 0.09 0.15 0.56 0.12 0.13 0.1 1.26 0.1 0.12 0.05 0.13 0.18 0.15 0.06 0.1 0.06 0.12 0.12 0.17
8.32 8.33 6.28 5.26 7.68 8.12 6.82 4.69 6.79 7.82 6.65 6.97 5.73 14.65 7.12 6.15 6.52 22.69 6.31 5.63 6.69 6.12 8.43 7.12 6.33 6.38 6.76 8.35 8.19 4.96
25.71 25.08 17.5 16.61 26.46 27.72 25.6 17.86 20.43 22.35 18.25 20.52 18.3 42.31 24.96 26.06 22.61 156.8 19.29 17.73 20.86 20.75 26.6 25.81 21.21 20.82 19.95 23.93 23.23 17.8
8.07 10.04 11.6 22.57 19.82 19.38 12.49 21.41 17.76 17.93 20.25 16.1 13.28 45.02 18.34 21.7 23.6 254.24 18.42 13.85 20.86 14.04 23.94 19.29 19.3 23.14 22.79 14.08 12.77 13.79
47.97 53.59 37.88 28.1 67.63 60.55 55.5 48.0 37.68 45.97 40.57 42.5 45.96 108.22 50.77 50.12 46.36 324.77 45.27 42.93 47.51 50.15 74.76 54.38 46.64 49.65 49.04 56.38 46.39 30.98
6.46 5.01 3.66 3.76 6.87 4.57 3.86 4.56 5.2 5.77 4.32 4.56 4.66 11.6 4.25 3.87 3.23 23.96 3.55 3.13 3.37 3.93 3.83 4.58 3.53 4.06 3.69 6.85 6.88 3.16
0.32 0.67 0.24 0.06 0.31 0.32 0.15 0.12 0.1 0.18 0.06 0.12 0.16 1.51 0.17 0.1 0.23 3.6 0.26 0.25 0.21 0.27 0.38 0.19 0.14 0.26 0.15 0.12 0.18 0.32
2.11 1.95 1.27 1.1 2.22 2.13 1.78 1.4 1.66 1.46 1.69 2.1 1.32 6.81 1.87 1.9 1.92 11.73 1.77 1.79 1.67 1.85 1.31 1.78 1.67 1.69 1.87 1.56 1.59 1.25
15.33 15.78 13.76 11.5 16.02 14.93 12.86 12.31 14.69 15.26 12.63 13.68 12.76 34.5 15.6 13.81 15.46 115.31 11.66 13.18 17.17 15.0 10.85 16.31 10.95 13.46 11.35 16.15 15.19 14.01
Spov3_chr1.04419 (AtNPC1 - 1)
 2.66 3.12 3.07 2.3 5.16 1.56 1.19 1.39 2.61 3.41 1.67 1.65 1.38 2.57 1.37 1.29 1.32 26.85 1.59 1.47 1.71 1.62 2.56 1.97 1.57 1.77 1.89 3.17 3.73 2.17
1.43 1.68 0.84 0.76 0.98 1.61 0.78 0.57 0.63 0.62 0.7 0.62 0.87 2.73 1.22 0.82 0.79 5.93 0.97 0.97 0.84 0.93 0.81 0.62 0.45 0.65 0.66 1.23 0.91 0.92
0.23 0.66 0.33 0.22 2.08 0.37 0.34 0.02 0.36 0.21 0.19 0.2 0.13 1.58 0.25 0.02 0.1 12.78 0.17 0.22 0.23 0.13 0.84 0.11 0.06 0.35 0.33 0.57 0.61 0.18
12.44 13.22 12.83 11.1 11.47 15.27 18.73 19.43 11.19 12.2 13.68 16.93 20.5 29.82 11.75 14.75 10.95 88.33 17.14 14.13 12.67 14.46 17.42 17.71 11.88 14.45 13.73 15.31 20.09 24.24
0.99 1.12 1.03 1.11 2.84 1.6 1.3 1.83 0.81 1.1 0.83 1.25 1.31 8.76 1.4 1.28 1.29 20.11 0.85 0.85 0.94 1.11 1.11 0.83 0.8 0.77 0.84 1.66 1.06 1.66
9.56 10.67 7.6 7.11 12.4 11.97 9.27 11.22 8.49 9.06 8.18 8.89 7.02 21.07 8.58 8.87 9.24 82.38 8.2 6.83 7.1 5.94 7.79 8.47 6.36 7.87 6.98 8.69 11.02 10.81
0.48 0.34 0.24 0.18 0.14 0.25 0.28 0.19 0.17 0.16 0.16 0.2 0.59 1.96 0.65 0.33 0.21 4.61 0.2 0.13 0.08 0.25 1.34 0.27 0.2 0.16 0.16 0.37 0.51 1.48
6.31 5.55 4.12 3.5 4.15 2.23 2.38 2.66 2.63 3.67 2.55 2.71 2.04 4.79 2.58 3.0 2.77 21.18 2.61 2.41 3.24 2.88 2.53 2.81 3.08 2.75 2.8 4.41 4.39 3.71
15.88 14.71 13.27 10.5 16.23 10.54 9.54 11.63 11.18 13.57 10.38 11.19 10.94 21.25 12.52 10.78 10.99 62.65 10.45 9.77 10.96 10.52 12.02 12.28 11.85 12.65 12.25 15.15 15.54 13.23
26.91 27.01 15.6 12.83 21.76 23.69 18.36 14.73 13.55 15.66 15.0 17.49 16.25 38.56 22.72 20.52 19.44 89.17 12.73 13.44 15.8 16.34 21.09 20.58 16.7 16.63 15.83 20.79 20.63 17.17
11.37 10.66 10.03 8.6 11.84 9.32 9.18 9.93 9.15 11.57 9.02 9.74 8.68 10.95 8.0 9.51 7.61 52.61 8.7 8.38 9.79 9.08 9.86 9.04 9.39 8.71 10.39 11.19 11.89 10.11
8.42 9.85 5.51 5.65 8.86 9.27 6.69 7.88 6.37 5.92 5.73 6.16 5.92 15.37 6.4 7.18 7.12 61.06 4.76 5.27 6.63 4.44 6.26 7.14 5.27 6.9 6.58 6.76 7.3 7.09
51.95 49.95 41.3 27.59 49.65 51.63 37.07 39.95 39.3 43.98 39.5 39.6 44.79 79.08 50.79 51.17 46.66 123.69 37.31 38.81 41.98 41.09 31.52 30.71 37.42 40.28 40.34 42.8 40.48 43.86
7.11 7.03 6.31 5.6 8.58 7.18 6.84 6.6 5.83 6.62 5.57 5.38 5.87 9.36 6.24 6.24 6.29 39.26 5.69 5.62 6.12 6.54 7.29 6.6 5.81 6.34 5.97 7.77 7.61 7.06
17.97 24.07 12.38 11.34 19.1 12.94 6.98 9.98 14.64 17.07 11.39 12.3 12.2 30.45 11.22 13.97 16.66 97.76 11.73 11.98 10.15 11.09 14.39 11.72 10.58 10.73 12.23 13.37 15.45 16.49
Spov3_chr3.04487 (SULTR4;1)
 26.84 17.11 17.75 31.38 4.8 28.29 15.01 14.06 10.11 13.25 7.95 8.01 10.1 86.27 27.7 21.87 13.3 397.68 15.31 10.54 7.8 17.42 23.34 9.07 4.96 7.41 6.35 7.39 32.41 66.72
2.05 2.31 1.89 3.01 1.55 2.5 2.05 1.44 1.81 1.99 1.7 1.7 1.95 16.6 3.61 3.14 2.45 32.81 1.76 1.5 2.2 1.4 5.23 1.04 0.83 1.58 1.2 1.17 1.66 5.05
77.13 67.42 64.3 64.58 79.08 58.37 58.08 55.86 63.79 65.89 66.39 57.5 71.05 106.19 65.18 67.59 71.39 174.88 58.23 55.73 61.36 58.6 55.13 59.4 64.5 63.46 64.77 70.51 62.32 63.24
25.65 23.75 21.39 22.95 28.91 26.08 24.42 26.71 22.41 24.45 22.24 23.38 22.75 38.83 25.71 28.36 25.82 135.07 22.73 23.65 27.41 26.28 25.1 24.41 23.93 25.18 25.8 21.75 21.04 22.41
3.61 4.85 2.87 3.04 3.83 4.69 3.42 3.52 2.62 3.81 3.09 3.51 3.53 16.43 5.25 5.17 4.7 35.65 3.01 3.11 2.86 2.52 3.34 5.42 2.33 4.04 3.4 2.51 3.19 5.1
19.42 19.44 10.55 9.8 12.98 15.86 11.48 10.53 11.09 10.72 9.0 15.74 11.77 72.26 17.16 20.55 24.5 173.62 11.01 11.13 17.14 17.01 15.87 20.29 17.05 16.57 16.66 6.45 12.99 16.35
Spov3_chr4.01663 (AtTIM21L-2)
 1.19 1.28 0.96 0.72 0.93 0.62 0.65 0.68 0.61 0.86 0.82 0.73 0.88 1.54 0.81 0.74 0.77 3.74 0.58 0.62 0.65 0.79 0.88 0.9 0.7 0.77 0.68 1.21 1.12 0.95
4.83 5.82 3.99 3.26 6.33 5.9 4.98 4.89 4.48 4.96 3.78 4.41 3.98 11.7 4.96 5.37 5.04 24.57 4.18 3.54 4.31 3.8 3.0 4.81 3.79 4.23 3.64 3.99 5.16 5.62
5.42 6.0 5.43 5.09 7.91 6.94 5.44 6.17 4.01 4.79 5.07 3.94 7.43 14.24 7.88 6.83 7.45 24.25 5.99 5.99 6.14 5.56 8.33 4.38 4.04 5.53 4.63 4.27 4.8 7.58
8.03 8.43 7.6 8.18 7.77 9.3 7.83 8.24 8.09 7.89 7.58 8.41 6.62 12.5 9.52 8.42 8.92 29.49 8.42 6.85 7.79 7.67 5.66 7.66 7.28 8.24 8.24 7.65 8.03 7.92
16.89 18.42 13.76 13.27 16.26 21.07 20.13 19.79 12.8 16.65 15.48 14.83 20.63 34.73 21.53 22.08 20.22 94.12 12.89 13.1 13.58 14.94 21.5 17.81 14.99 16.15 14.1 17.33 16.37 15.81
2.68 2.75 2.14 2.03 3.57 2.67 2.19 1.98 2.65 3.47 2.38 2.15 1.83 4.54 2.52 2.11 2.26 19.31 2.88 1.78 2.68 2.21 3.16 1.74 2.34 2.92 2.12 2.79 2.06 1.46
19.98 12.11 5.21 4.33 6.82 10.27 7.14 3.43 4.15 6.48 6.22 6.56 12.6 52.65 8.26 6.92 6.84 109.42 6.74 4.65 5.77 5.92 17.37 8.05 7.39 7.16 6.94 12.69 7.57 8.13
4.25 4.57 3.3 3.12 3.89 3.82 3.52 3.53 3.23 3.97 3.25 3.59 3.05 6.27 4.27 3.95 3.95 20.14 2.68 2.47 3.13 3.4 5.56 3.91 3.45 3.36 3.59 4.18 4.09 3.31
7.21 7.28 5.03 4.23 7.53 4.64 4.83 4.53 4.26 4.97 4.23 4.46 4.57 8.27 5.27 5.21 4.42 32.05 4.82 4.15 4.98 4.32 5.8 5.62 5.18 5.98 4.75 6.52 5.37 5.2
12.74 13.63 9.19 8.43 13.43 9.15 7.66 7.81 9.49 11.17 8.65 8.72 6.78 19.08 8.62 9.03 7.84 49.28 8.01 7.61 8.23 8.26 8.16 9.16 8.2 9.22 9.11 11.71 12.13 9.15
2.71 2.57 2.16 2.49 3.35 2.24 1.75 2.3 1.72 2.96 2.24 1.98 1.48 4.52 1.87 1.98 2.28 24.33 1.56 1.49 2.43 1.73 2.66 2.09 1.76 2.18 2.28 2.8 2.95 2.87
Spov3_chr5.00801 (NRT1.12)
 3.64 5.62 4.6 2.98 12.48 5.25 3.24 5.37 5.35 5.38 2.95 3.91 3.4 9.43 3.74 4.37 3.52 49.37 3.68 3.16 3.39 3.06 5.05 4.22 2.5 3.23 3.02 8.0 9.8 6.3
1.03 0.9 0.63 0.49 1.92 0.56 0.61 0.99 0.62 0.86 0.7 0.54 1.14 3.22 0.92 0.71 0.68 8.66 0.61 0.5 0.74 0.83 1.24 0.69 0.79 0.7 0.88 1.03 0.9 0.5
11.37 12.49 8.97 8.98 11.13 9.95 8.38 8.49 9.18 8.53 8.92 9.51 10.35 16.49 12.1 10.62 10.68 29.95 9.95 7.91 9.63 9.07 7.65 9.48 8.89 9.01 10.38 8.67 9.09 9.46
34.99 33.12 22.18 15.59 32.53 28.36 37.75 25.5 28.04 28.86 28.6 31.33 27.95 75.03 28.32 22.84 20.75 177.53 32.36 28.32 24.01 28.67 41.74 36.11 28.26 24.97 24.32 38.93 36.54 13.45
6.33 4.97 3.92 3.97 7.27 5.16 3.54 3.52 3.27 4.01 4.33 4.57 5.8 17.07 6.03 4.69 4.96 27.92 4.02 3.36 3.49 3.91 7.58 4.58 3.91 3.47 4.1 5.29 5.74 8.32
25.65 23.75 21.39 22.95 28.91 26.08 24.42 26.71 22.41 24.45 22.24 23.38 22.75 38.83 25.71 28.36 25.82 135.07 22.73 23.65 27.41 26.28 25.1 24.41 23.93 25.18 25.8 21.75 21.04 22.41
0.09 0.2 0.04 0.02 0.08 0.12 0.03 0.02 0.01 0.09 0.02 0.0 0.04 0.4 0.05 0.04 0.04 1.46 0.1 0.14 0.11 0.06 0.35 0.04 0.01 0.08 0.04 0.02 0.04 0.04
16.74 17.07 13.77 13.4 16.98 13.48 11.48 12.09 11.43 13.42 11.62 11.29 12.16 21.66 13.43 13.03 12.83 61.84 10.46 10.65 11.89 12.0 18.03 12.63 11.52 12.24 12.65 16.01 14.32 13.84
2.33 2.31 1.49 1.17 2.01 1.44 1.23 1.27 1.62 1.68 1.26 1.46 1.86 4.23 1.6 1.83 1.39 8.77 1.18 1.34 1.19 1.53 1.52 1.43 1.37 1.53 1.16 2.16 2.45 2.04
5.06 4.57 3.29 4.52 4.18 3.88 3.07 4.0 2.71 3.26 2.69 3.35 4.24 6.74 4.21 3.98 3.99 23.32 3.06 2.92 2.33 2.82 3.59 3.17 3.04 3.02 2.48 3.69 4.74 5.44
0.11 0.17 0.13 0.04 0.12 0.14 0.02 0.03 0.1 0.07 0.08 0.11 0.1 0.52 0.1 0.07 0.11 2.42 0.04 0.03 0.07 0.09 0.22 0.04 0.08 0.06 0.09 0.12 0.09 0.04
0.96 1.41 0.54 0.25 1.34 1.86 0.73 0.31 0.38 1.16 0.68 0.56 0.91 4.09 0.93 1.17 0.67 10.15 1.16 0.74 1.0 1.03 1.51 1.03 0.5 1.12 1.09 0.9 0.46 1.0
13.63 17.17 10.07 7.93 17.93 31.38 15.89 8.77 13.01 12.49 10.78 12.83 13.99 75.69 18.32 18.14 14.52 204.93 10.84 12.44 13.62 11.76 13.59 17.08 9.84 11.89 9.58 9.71 9.65 13.46
4.66 5.1 3.52 1.81 7.1 6.82 5.78 3.26 4.27 5.66 4.44 5.82 4.19 14.88 6.77 6.15 5.76 25.8 4.46 3.97 5.21 4.72 3.07 5.41 5.41 5.68 5.32 5.76 5.27 4.33
10.42 10.65 8.1 7.79 9.86 9.38 8.09 7.61 8.26 8.53 8.61 7.68 7.97 19.1 10.41 9.3 9.59 34.74 7.61 7.17 8.38 7.7 10.43 9.52 7.6 8.29 7.86 10.29 9.02 8.0
3.83 4.16 3.5 3.1 3.78 3.21 3.09 3.22 2.89 3.68 3.31 3.08 4.18 5.64 3.92 4.07 3.78 13.62 2.7 2.66 3.4 3.25 4.54 3.53 2.97 3.32 3.74 3.51 3.62 3.32
0.75 1.01 0.73 0.91 0.77 1.14 0.64 0.71 0.73 0.51 0.58 0.5 0.44 2.77 0.95 0.94 1.04 4.98 0.49 0.66 0.53 0.78 0.54 1.02 0.66 0.45 0.74 0.43 0.78 0.78
115.88 130.82 93.97 101.89 132.64 115.41 104.44 106.33 129.57 159.4 135.46 128.32 133.6 207.67 156.02 154.91 138.39 741.65 121.7 106.65 126.91 122.84 131.89 126.36 129.11 125.41 118.07 114.1 96.46 106.56
90.93 61.93 28.05 24.32 142.22 21.9 13.06 14.31 32.58 14.63 15.76 13.67 4.07 161.88 20.2 17.6 7.64 393.13 13.76 13.76 25.55 24.29 24.07 20.47 18.61 15.66 12.29 27.32 10.18 1.78
3.06 3.17 2.83 2.52 3.16 2.65 2.56 2.76 2.68 3.02 2.54 2.94 2.3 4.51 3.13 2.37 2.94 12.31 2.89 2.6 2.75 2.56 2.35 2.51 2.67 2.73 2.95 2.73 2.85 2.21

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)