- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_C0002.00219 (CCT2) | 0.05 | 0.09 | -0.33 | -0.61 | 0.1 | 0.29 | 0.12 | 0.1 | -0.37 | -0.24 | -0.31 | -0.11 | -0.35 | 1.18 | 0.13 | -0.04 | -0.1 | 0.73 | -0.06 | -0.2 | -0.03 | 0.01 | -0.43 | 0.12 | -0.21 | -0.14 | -0.19 | 0.04 | -0.18 | -0.43 |
| -0.0 | 0.47 | -0.43 | -3.12 | 0.91 | 0.35 | -0.3 | -1.09 | -0.37 | -1.22 | -0.6 | -0.75 | -1.75 | 2.65 | 0.33 | -0.43 | -0.93 | 0.79 | -2.48 | -0.77 | -0.58 | -0.32 | -0.79 | 0.98 | -0.51 | -0.29 | -0.26 | -3.14 | 0.09 | -0.49 | |
Spov3_C0011.00001 (WIP3) | -3.78 | 0.32 | - | - | 2.08 | -3.13 | - | - | - | - | - | - | - | 4.02 | -3.95 | - | - | 2.65 | - | - | - | - | -1.14 | -1.53 | - | - | - | -0.26 | -4.1 | -3.13 |
Spov3_C0110.00001 (GME) | 0.27 | 0.26 | -0.19 | -0.55 | 0.29 | -0.02 | 0.07 | 0.21 | -0.18 | 0.06 | -0.19 | -0.06 | 0.12 | 0.83 | 0.17 | 0.01 | -0.01 | -0.06 | -0.2 | -0.2 | -0.21 | -0.24 | -0.46 | -0.08 | -0.17 | -0.1 | -0.12 | 0.14 | 0.04 | -0.14 |
| 0.5 | 0.58 | -0.35 | -1.12 | 0.51 | 0.16 | -0.66 | -1.51 | -0.47 | 0.2 | -0.58 | -0.17 | -0.4 | 2.16 | -0.17 | -0.22 | -0.57 | -0.63 | -0.43 | -0.59 | -0.36 | -0.25 | -0.43 | 0.16 | -0.21 | -0.15 | -0.2 | 0.4 | 0.18 | -0.66 | |
| -0.67 | 1.15 | - | -0.84 | 0.52 | -0.25 | -1.5 | -1.29 | -2.69 | 0.45 | 0.26 | -1.78 | 0.04 | 3.52 | - | -1.65 | -1.6 | -0.53 | -1.56 | -1.85 | 0.29 | - | -1.26 | -1.25 | -0.14 | -0.73 | -1.32 | 0.24 | -0.64 | -1.74 | |
| -0.03 | 0.07 | -0.22 | -0.33 | 0.37 | -0.09 | -0.32 | -0.35 | -0.13 | 0.08 | -0.13 | -0.12 | 0.01 | 1.24 | 0.02 | 0.0 | -0.03 | 0.03 | -0.23 | -0.22 | -0.06 | -0.22 | -0.13 | -0.12 | -0.2 | 0.05 | 0.12 | -0.08 | 0.03 | 0.0 | |
Spov3_chr1.03078 (GPCR) | 0.91 | 0.97 | -1.05 | -1.68 | 0.48 | 0.25 | -1.06 | -1.22 | -1.56 | -0.92 | -1.98 | -1.29 | -0.69 | 2.63 | -0.6 | -1.15 | -1.6 | 1.51 | -1.55 | -1.81 | -1.31 | -1.41 | 0.04 | -1.2 | -2.15 | -1.26 | -1.75 | -0.28 | 0.11 | 1.82 |
| 1.17 | -0.1 | -2.94 | -3.35 | 1.07 | -0.67 | -2.31 | -1.08 | -3.55 | -1.89 | -2.34 | -1.97 | 0.09 | 3.39 | -0.59 | -1.62 | -1.87 | 1.15 | -1.53 | -2.47 | -1.93 | -1.45 | 0.42 | -1.91 | -1.9 | -1.06 | -1.98 | -0.46 | -1.0 | 1.24 | |
Spov3_chr1.04192 (TMT2) | 0.13 | 0.27 | -0.54 | -0.98 | 0.81 | 0.15 | -0.21 | 0.24 | -0.73 | -0.43 | -0.72 | -0.47 | -0.16 | 1.79 | 0.05 | -0.04 | -0.24 | 0.97 | -0.67 | -0.56 | -0.42 | -0.47 | -0.18 | -0.17 | -0.53 | -0.39 | -0.5 | 0.3 | 0.12 | -0.44 |
| -0.01 | 0.16 | -0.35 | -0.49 | 0.3 | 0.22 | -0.09 | -0.24 | -0.25 | -0.1 | -0.29 | -0.18 | -0.24 | 1.33 | 0.04 | 0.18 | 0.1 | 0.45 | -0.2 | -0.28 | 0.01 | -0.28 | -0.32 | -0.05 | -0.14 | 0.01 | -0.28 | -0.21 | -0.09 | -0.08 | |
| 0.34 | 0.52 | -0.5 | -1.92 | 0.39 | 0.23 | -0.07 | -0.2 | -0.57 | 0.01 | -0.59 | -0.06 | -0.01 | 1.55 | -0.22 | -0.27 | -0.58 | 0.8 | -0.29 | -0.65 | -0.35 | -0.35 | -0.3 | 0.1 | -0.28 | -0.05 | -0.23 | 0.31 | 0.12 | -0.3 | |
Spov3_chr2.00226 (TT3) | -0.07 | -0.35 | -0.07 | -0.31 | 0.96 | 0.44 | -0.33 | -0.77 | -0.33 | -0.04 | -0.69 | -0.66 | -0.48 | 2.2 | -0.23 | -0.34 | -0.27 | 0.98 | -0.34 | -0.59 | -0.42 | -0.35 | 0.72 | -0.58 | -0.5 | -1.0 | -0.86 | -0.11 | -0.9 | -0.99 |
Spov3_chr2.00522 (GBSS1) | 0.82 | 0.8 | -1.14 | -2.19 | -0.17 | 0.41 | -0.08 | -0.19 | -1.55 | -0.7 | -1.09 | -0.9 | -0.28 | 2.46 | -0.31 | 0.11 | -0.14 | 0.78 | -0.6 | -0.83 | -0.3 | -0.32 | -0.36 | -0.19 | -0.85 | -0.3 | -0.57 | -0.23 | -0.54 | -0.15 |
Spov3_chr2.00523 (GSTZ2) | 0.68 | 1.02 | -0.95 | -1.94 | -0.06 | 0.54 | 0.01 | -0.03 | -1.9 | -0.78 | -1.35 | -1.11 | -0.36 | 2.36 | -0.3 | 0.02 | -0.39 | 1.03 | -0.47 | -0.76 | -0.51 | -0.38 | -0.49 | -0.27 | -0.84 | -0.21 | -0.53 | -0.31 | -0.41 | -0.12 |
Spov3_chr2.00853 (SPT6) | 0.13 | 0.07 | -0.12 | -0.16 | 0.11 | 0.07 | -0.38 | -0.12 | 0.01 | 0.05 | -0.27 | -0.15 | -0.09 | 1.41 | 0.08 | 0.13 | 0.02 | 0.51 | -0.3 | -0.38 | -0.18 | -0.26 | -0.26 | -0.01 | -0.19 | -0.15 | -0.2 | -0.42 | -0.19 | -0.21 |
Spov3_chr2.00984 (RSW1) | 0.1 | 0.05 | -0.03 | -0.04 | 0.12 | -0.03 | -0.04 | 0.13 | -0.0 | -0.0 | 0.06 | 0.06 | -0.1 | 0.48 | 0.13 | 0.0 | -0.01 | -0.26 | -0.18 | -0.14 | -0.02 | 0.01 | -0.05 | -0.14 | -0.1 | -0.01 | 0.0 | 0.08 | -0.03 | -0.21 |
| -0.17 | -0.06 | -1.29 | -2.21 | 0.64 | 0.37 | -0.65 | -0.43 | -1.04 | -0.46 | -1.04 | -1.3 | 0.25 | 2.48 | -0.84 | -0.81 | -0.65 | 1.27 | -0.41 | -0.46 | -0.75 | -0.07 | 1.01 | -0.71 | -0.58 | -0.11 | -0.35 | -0.12 | -0.41 | -0.85 | |
Spov3_chr2.03535 (ZRZ) | 0.69 | 0.46 | -0.52 | -1.41 | 0.62 | 0.09 | -1.31 | -0.72 | -0.57 | -0.12 | -1.45 | -0.88 | 0.14 | 2.34 | -0.97 | -0.75 | -1.57 | 1.15 | -1.0 | -2.01 | -0.6 | -1.44 | 0.64 | -0.64 | -1.45 | -0.28 | -0.66 | -0.03 | 0.38 | 0.94 |
Spov3_chr2.04047 (PIP5K8) | 0.15 | 0.1 | -0.29 | -0.32 | 0.06 | 0.36 | 0.1 | 0.2 | -0.18 | -0.2 | -0.24 | -0.08 | -0.04 | 0.99 | -0.01 | 0.01 | -0.14 | -0.2 | -0.28 | -0.35 | -0.23 | -0.08 | 0.41 | -0.0 | -0.14 | -0.22 | -0.25 | 0.19 | -0.02 | -0.14 |
Spov3_chr3.01220 (TBL37) | 0.81 | 0.28 | -0.58 | -0.8 | 0.57 | -0.01 | -0.35 | -0.55 | -0.97 | -0.64 | -0.52 | -0.43 | -0.12 | 1.95 | -0.26 | -0.29 | -0.23 | 0.9 | -0.42 | -0.63 | -0.48 | -0.3 | 0.59 | -0.26 | -0.46 | -0.35 | -0.26 | 0.05 | -0.36 | -0.61 |
| -0.2 | 0.27 | -0.38 | -2.26 | 0.68 | 0.32 | -0.59 | -0.56 | -0.66 | -0.07 | 0.06 | 0.17 | -0.26 | 2.06 | 0.22 | 0.59 | 0.06 | 0.3 | -0.72 | -0.99 | -0.18 | -0.2 | -0.48 | 0.16 | -0.85 | -0.03 | -0.92 | -1.07 | 0.09 | -0.41 | |
Spov3_chr3.02312 (Kin3) | 0.65 | 0.38 | 0.09 | -0.2 | 0.38 | -0.09 | -0.2 | -0.23 | -0.17 | -0.13 | -0.45 | -0.28 | -0.28 | 1.22 | 0.02 | -0.19 | -0.17 | 0.76 | -0.26 | -0.29 | -0.27 | -0.21 | -0.2 | -0.36 | -0.43 | -0.39 | -0.25 | -0.17 | 0.19 | -0.18 |
Spov3_chr3.02380 (PDE331) | 0.18 | 0.39 | -0.2 | -0.37 | 0.7 | -0.08 | -0.42 | -1.11 | -0.21 | -0.09 | -0.36 | -0.36 | -0.52 | 1.82 | 0.22 | 0.16 | 0.09 | 0.24 | -0.27 | -0.44 | -0.16 | -0.16 | -0.22 | -0.07 | -0.5 | -0.24 | -0.37 | -0.05 | -0.36 | -0.38 |
Spov3_chr3.02987 (RD21B) | -0.13 | -0.07 | -0.58 | -0.55 | 0.99 | -0.0 | -0.83 | -1.11 | -0.53 | -0.04 | -0.76 | -0.7 | 0.72 | 2.53 | 0.23 | -0.29 | -0.6 | 0.5 | -0.56 | -0.76 | -0.32 | -0.77 | -0.13 | -0.65 | -1.01 | -0.6 | -0.75 | 0.05 | 0.05 | -1.31 |
| 0.26 | 0.53 | -0.12 | -0.42 | 0.56 | 0.29 | -0.08 | -0.29 | -0.56 | -0.38 | -0.43 | -0.35 | -0.47 | 1.58 | 0.0 | -0.05 | -0.08 | 0.39 | -0.18 | -0.39 | -0.07 | -0.06 | -0.16 | -0.34 | -0.42 | -0.26 | -0.39 | -0.17 | -0.12 | -0.15 | |
Spov3_chr3.04763 (ARI8) | -1.15 | 1.03 | -0.77 | -3.12 | 0.87 | -0.5 | -0.7 | - | -2.66 | -1.35 | - | -0.18 | -1.24 | 3.44 | - | 0.16 | -0.69 | -0.52 | -0.65 | -2.05 | -0.11 | -0.26 | -1.92 | -0.94 | -1.32 | -0.95 | -0.74 | 0.74 | -0.47 | 0.23 |
| 1.3 | 0.7 | -0.39 | -1.23 | 0.35 | 0.08 | -0.34 | -0.7 | -0.51 | -0.14 | -0.51 | -0.3 | -1.11 | 2.2 | -0.48 | -0.83 | -0.74 | 1.12 | -0.7 | -0.8 | -0.61 | -0.73 | -0.02 | -0.28 | -0.72 | -0.48 | -0.6 | -0.07 | -0.13 | -0.62 | |
Spov3_chr4.02323 (PPH) | 0.48 | 0.39 | -0.49 | -0.99 | 0.61 | 0.16 | -0.16 | -0.57 | -0.26 | -0.25 | -0.45 | -0.32 | -0.44 | 1.97 | -0.05 | -0.11 | -0.34 | 0.39 | -0.42 | -0.41 | -0.36 | -0.34 | -0.26 | -0.12 | -0.44 | -0.28 | -0.35 | 0.02 | 0.11 | -0.43 |
Spov3_chr4.02548 (DPE2) | 0.57 | 0.52 | -0.24 | -0.85 | 0.02 | -0.23 | -0.06 | 0.24 | -0.45 | -0.21 | -0.32 | -0.12 | -0.09 | 1.28 | -0.18 | -0.24 | -0.25 | 0.15 | -0.32 | -0.28 | -0.26 | -0.13 | -0.36 | 0.0 | -0.09 | -0.1 | -0.1 | 0.35 | 0.14 | -0.06 |
Spov3_chr4.02800 (LESV) | 0.68 | 0.61 | -0.56 | -1.84 | 0.94 | -0.32 | -0.86 | -0.75 | -1.16 | -0.61 | -1.07 | -0.91 | -0.27 | 2.58 | -0.66 | -0.76 | -0.65 | 1.11 | -0.71 | -0.8 | -0.63 | -0.53 | -0.59 | -0.3 | -0.42 | -0.55 | -0.52 | 0.39 | -0.23 | -0.32 |
Spov3_chr4.02992 (HDG9) | 0.42 | 0.51 | -0.52 | -1.33 | 0.35 | 0.37 | -0.23 | -0.56 | -0.47 | -0.21 | -0.57 | -0.19 | -0.33 | 1.72 | 0.0 | -0.01 | -0.11 | 0.86 | -0.36 | -0.48 | -0.31 | -0.15 | -0.47 | -0.08 | -0.59 | -0.14 | -0.34 | 0.17 | -0.11 | -0.29 |
| -0.01 | -0.05 | -0.62 | -1.6 | 1.01 | 0.05 | -1.04 | -1.21 | -1.03 | -0.34 | -0.76 | -1.23 | -0.45 | 2.89 | -0.25 | -0.66 | -0.3 | 0.27 | -0.64 | -0.79 | -0.82 | -0.16 | 0.02 | -0.25 | -0.71 | -0.94 | -0.82 | 0.3 | -0.16 | -0.3 | |
| 0.55 | 0.33 | -0.38 | -0.66 | 0.88 | 0.12 | -0.4 | -0.52 | -0.76 | -0.17 | -0.59 | -0.78 | -0.45 | 1.82 | -0.12 | -0.12 | -0.33 | 0.65 | -0.25 | -0.64 | -0.18 | -0.43 | -0.03 | -0.18 | -0.64 | -0.22 | -0.29 | 0.14 | 0.12 | -0.27 | |
| - | - | - | - | -0.61 | 0.29 | -0.68 | - | - | - | - | - | - | 4.29 | - | -0.48 | - | 0.54 | 0.93 | - | -0.3 | - | -0.45 | 0.61 | - | - | - | - | - | -0.36 | |
Spov3_chr5.00257 (ISA3) | 0.31 | 0.54 | -0.37 | -1.03 | 0.53 | -0.26 | -0.43 | -0.37 | -0.35 | 0.07 | -0.48 | -0.29 | -0.48 | 2.0 | -0.6 | -0.46 | -0.5 | 0.28 | -0.15 | -0.36 | -0.23 | -0.11 | -0.57 | -0.09 | -0.14 | 0.0 | 0.03 | 0.41 | -0.29 | -0.52 |
Spov3_chr5.00276 (SRK2C) | 0.49 | 0.56 | -0.59 | -0.7 | 0.64 | -0.2 | -0.63 | -0.39 | -0.88 | -0.3 | -0.79 | -0.66 | -0.19 | 2.21 | -0.98 | -1.19 | -1.15 | 1.32 | -0.5 | -0.99 | -0.7 | -0.74 | 0.94 | -0.72 | -0.49 | -0.51 | -0.46 | 0.14 | -0.3 | 0.02 |
Spov3_chr5.00723 (SINAT3) | 0.26 | 0.32 | -0.21 | -0.45 | 0.75 | -0.16 | -0.32 | -0.89 | -0.24 | 0.03 | -0.46 | -0.38 | -0.45 | 1.66 | 0.06 | 0.07 | -0.1 | 0.47 | -0.26 | -0.46 | -0.13 | -0.31 | -0.47 | 0.2 | -0.23 | -0.11 | -0.27 | -0.11 | -0.11 | -0.38 |
| 0.14 | 0.16 | 0.03 | 0.07 | -0.09 | -0.04 | 0.05 | 0.37 | 0.03 | 0.1 | -0.05 | -0.05 | -0.12 | 0.66 | 0.01 | -0.03 | -0.09 | -0.33 | -0.29 | -0.19 | -0.17 | -0.14 | 0.11 | -0.15 | -0.19 | -0.16 | -0.08 | 0.17 | 0.03 | -0.16 | |
| 1.26 | 0.9 | -0.99 | -1.24 | 0.67 | -1.44 | -1.11 | -1.23 | -0.69 | -0.65 | -0.98 | -0.87 | -1.66 | 3.36 | -1.54 | -1.66 | -1.74 | -1.09 | -0.5 | -1.47 | -1.01 | -0.76 | -0.27 | -0.63 | -1.49 | -1.05 | -0.51 | -0.07 | -0.36 | -0.41 | |
| 0.33 | 0.36 | 0.04 | -0.28 | -0.06 | -0.13 | 0.05 | 0.45 | -0.07 | -0.03 | -0.26 | -0.11 | -0.25 | 1.29 | -0.2 | -0.28 | -0.36 | -0.27 | -0.51 | -0.38 | -0.32 | -0.22 | 0.36 | -0.29 | -0.27 | -0.24 | -0.27 | 0.21 | 0.21 | -0.01 | |
| 0.08 | 0.39 | -0.41 | -0.84 | 0.45 | -0.14 | -0.29 | -0.43 | -0.16 | 0.07 | -0.23 | -0.29 | -0.24 | 1.77 | -0.18 | -0.11 | -0.27 | 0.39 | -0.28 | -0.22 | -0.13 | -0.31 | -0.39 | 0.13 | -0.22 | 0.03 | -0.41 | 0.22 | 0.03 | -0.78 | |
Spov3_chr6.01678 (HDA8) | 0.24 | 0.45 | -0.05 | -0.29 | -0.15 | -0.07 | -0.2 | 0.22 | -0.0 | 0.18 | -0.22 | -0.12 | -0.43 | 0.98 | -0.14 | -0.06 | -0.37 | 0.12 | -0.32 | -0.3 | 0.1 | -0.28 | 0.43 | -0.01 | -0.35 | -0.2 | -0.27 | 0.1 | 0.1 | -0.07 |
| 0.49 | 0.34 | 0.2 | -0.09 | 0.6 | -0.65 | -0.93 | -0.51 | -0.41 | -0.03 | -0.68 | -0.7 | -0.03 | 2.04 | -0.58 | -0.51 | -0.67 | 0.9 | -0.75 | -0.99 | -0.76 | -0.49 | 0.75 | -0.54 | -0.27 | -0.56 | -0.33 | 0.07 | -0.25 | -0.02 | |
Spov3_S01.00077 (BCHA2) | 0.24 | 0.33 | -0.24 | -1.0 | -0.02 | 0.17 | -0.35 | -0.14 | -0.31 | 0.02 | -0.44 | -0.11 | -0.1 | 1.82 | -0.04 | 0.26 | 0.07 | 0.22 | -0.35 | -0.73 | -0.4 | 0.1 | -0.28 | -0.23 | -0.44 | -0.41 | -0.57 | 0.06 | 0.13 | -0.2 |
| -0.61 | 0.34 | - | - | -0.1 | 0.08 | - | - | - | -0.63 | - | - | - | 4.39 | - | - | 0.89 | - | - | - | - | - | 1.39 | - | - | - | - | - | - | - | |
Spov3_S09.00044 (AMY2) | -0.1 | -0.1 | -0.4 | -0.35 | -0.07 | -0.07 | -0.29 | -0.01 | -0.57 | -0.5 | -0.28 | -0.11 | 0.36 | 1.77 | 0.35 | 0.2 | 0.0 | -0.23 | -0.53 | -0.68 | -0.28 | -0.39 | 0.07 | -0.04 | -0.47 | -0.12 | -0.22 | -0.17 | -0.18 | 0.66 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.