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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_C0002.00039 (IQD19) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.36 | - | - | - | - | 4.84 | - | - | - | - | - | - | - |
Spov3_C0025.00033 (WRKY75) | -0.23 | -0.23 | -0.7 | -0.79 | -0.1 | -2.72 | -0.77 | -0.51 | -0.73 | -1.89 | -0.77 | -0.8 | -0.55 | -0.78 | -0.97 | -0.52 | -1.01 | 1.18 | -0.97 | -0.9 | -0.89 | -0.22 | 3.47 | -0.67 | -0.72 | -1.01 | -0.47 | -0.96 | -1.09 | -1.13 |
| -0.92 | -1.64 | -1.88 | -1.55 | -0.15 | -3.23 | -3.73 | -3.45 | -1.65 | -2.14 | -3.75 | -1.65 | -0.86 | -1.3 | -1.97 | -3.06 | -3.71 | 1.8 | -2.6 | -2.87 | -1.6 | -3.9 | 4.23 | -1.84 | -2.98 | -2.01 | -2.51 | -0.99 | -1.17 | -1.87 | |
Spov3_C0960.00001 (ERF1A) | - | - | - | - | - | - | - | - | - | - | -1.36 | - | - | - | 0.36 | 0.17 | - | -0.11 | - | - | - | - | 4.72 | - | - | - | - | - | - | - |
Spov3_chr1.00173 (LHT1) | 0.25 | -0.71 | -1.44 | -1.85 | -0.11 | -2.69 | -3.04 | -2.12 | -1.72 | -1.61 | -2.11 | -2.95 | -0.63 | -0.18 | -0.91 | -2.6 | -3.13 | 1.79 | -2.27 | -2.84 | -2.33 | -2.28 | 4.05 | -2.29 | -2.13 | -3.02 | -2.2 | -1.62 | -0.7 | -1.75 |
Spov3_chr1.00256 (LSF1) | - | - | - | - | - | - | - | - | - | - | - | - | -0.1 | - | - | - | - | -0.5 | - | - | - | - | 4.83 | - | - | - | - | - | - | - |
Spov3_chr1.00287 (KOR2) | -1.95 | -2.02 | -1.61 | 0.54 | -1.56 | -2.26 | -3.08 | -2.11 | -2.92 | -1.39 | -2.74 | -2.25 | 1.08 | -1.75 | -0.8 | -2.4 | -1.56 | 1.58 | -1.39 | -2.94 | -1.62 | -1.25 | 3.82 | -2.37 | -1.59 | -1.53 | -1.27 | -1.09 | -1.85 | 1.05 |
| -0.31 | -0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.61 | - | - | - | -0.6 | 4.38 | - | - | - | -0.52 | - | - | - | |
Spov3_chr1.00789 (CHAT) | 0.03 | -0.3 | -1.66 | -2.58 | 0.47 | -2.33 | -1.87 | -2.48 | -1.85 | -2.38 | -2.63 | -2.58 | -2.05 | -1.97 | -2.9 | -2.72 | -1.84 | 1.97 | -2.85 | -2.59 | -2.32 | -2.23 | 4.07 | -2.32 | -2.56 | -2.28 | -2.41 | -1.15 | -0.37 | -1.42 |
Spov3_chr1.00960 (LigB) | -1.17 | -0.5 | -0.66 | -1.25 | 0.67 | -0.56 | -1.34 | -1.1 | -0.72 | -0.36 | -1.2 | -0.69 | -1.02 | 0.98 | -0.61 | -1.28 | -1.12 | 0.99 | -1.06 | -1.1 | -0.52 | -0.89 | 3.37 | -1.19 | -1.09 | -0.67 | -1.15 | -0.42 | -0.8 | -1.37 |
| -0.16 | -0.28 | -0.54 | -0.69 | 0.44 | -0.57 | -0.56 | -0.57 | -0.53 | -0.28 | -0.59 | -0.69 | -0.27 | 0.57 | -0.25 | -0.63 | -0.5 | 0.75 | -0.53 | -0.35 | -0.5 | -0.53 | 2.71 | -0.46 | -0.58 | -0.41 | -0.38 | -0.47 | -0.19 | -0.64 | |
Spov3_chr1.03880 (STA1) | - | - | -3.06 | - | -1.68 | -2.37 | - | -1.58 | -0.93 | -2.17 | -2.21 | -3.3 | -0.4 | 0.19 | -1.7 | -2.2 | -3.09 | 1.55 | -1.75 | 0.62 | -0.82 | -0.36 | 4.19 | -2.3 | -1.6 | -0.88 | - | - | - | - |
Spov3_chr1.04224 (DSO) | -0.29 | -2.29 | - | -6.19 | -1.43 | - | -4.61 | - | - | -4.64 | -6.16 | -6.43 | -2.22 | -4.82 | -4.83 | - | -6.26 | 2.72 | - | -5.47 | - | - | 4.41 | - | -4.88 | - | -4.4 | - | -2.45 | - |
Spov3_chr1.04887 (CYP72A7) | -1.71 | -2.42 | -3.44 | -3.44 | -1.37 | -1.98 | -1.87 | -2.26 | -3.65 | -3.2 | -3.21 | -3.04 | 0.21 | -0.78 | -2.22 | -2.23 | -2.62 | 1.96 | -2.76 | -2.93 | -2.92 | -3.14 | 4.33 | -2.68 | -2.91 | -3.11 | -3.28 | -2.78 | -3.03 | -3.2 |
| - | - | - | - | - | - | - | - | -5.06 | - | - | - | - | - | -3.14 | - | - | 0.36 | - | - | - | - | 4.84 | - | - | - | - | - | - | - | |
Spov3_chr2.00542 (JAM2) | -0.22 | 0.12 | -3.34 | -2.07 | 0.97 | -1.32 | - | -2.32 | -1.84 | -1.55 | -3.21 | -2.15 | -1.56 | 0.97 | -1.67 | -1.47 | -2.28 | 0.21 | -3.22 | -3.5 | -2.7 | -3.46 | 4.09 | -2.4 | -3.54 | -1.91 | -2.79 | -0.91 | -2.2 | -0.08 |
Spov3_chr2.00923 (CYP76C2) | -6.32 | -6.43 | -5.51 | - | - | - | - | - | -5.39 | -5.03 | -6.52 | - | -1.84 | -5.13 | -5.76 | -5.06 | - | -1.76 | - | - | - | - | 4.87 | -6.47 | - | -6.91 | - | - | -4.96 | - |
| -3.02 | -2.79 | -3.6 | -6.46 | -3.1 | -3.23 | -4.8 | -5.15 | -4.0 | -2.65 | -3.81 | -3.38 | -1.2 | -3.1 | -2.67 | -4.18 | -4.16 | 1.01 | -3.22 | -3.5 | -3.89 | -5.34 | 4.68 | -6.09 | -3.32 | -5.3 | -4.89 | -5.05 | -4.45 | -6.28 | |
| -3.7 | -5.44 | - | - | -3.25 | -6.8 | - | - | - | - | - | - | -7.44 | - | - | - | - | -2.91 | - | -6.11 | - | - | 4.89 | - | - | - | - | - | -7.53 | - | |
| -1.94 | -1.3 | -2.15 | -1.92 | 0.0 | -2.97 | -2.42 | -3.75 | -3.18 | -1.97 | -1.94 | -3.65 | -1.77 | -3.17 | 0.23 | -3.85 | -2.56 | 1.11 | -1.41 | -2.2 | -1.99 | -2.79 | 4.35 | -2.21 | -2.53 | -2.65 | -1.42 | -3.15 | -1.52 | -3.84 | |
| -2.84 | -3.51 | -5.03 | -5.73 | -1.5 | -7.19 | -5.8 | -6.55 | -6.49 | -7.99 | -6.0 | -7.63 | -6.16 | -5.2 | -0.9 | -5.12 | -6.39 | -0.62 | -5.29 | -7.77 | -6.92 | -6.53 | 4.8 | -5.79 | -5.42 | -5.65 | -5.07 | -6.16 | -5.49 | -8.24 | |
Spov3_chr2.01777 (YUC10) | -0.52 | GO:0006793-0.86 | -1.1 | -1.06 | 0.43 | -0.55 | -0.51 | -0.5 | -0.86 | -0.49 | -0.66 | -0.78 | 0.19 | 0.44 | -0.56 | -1.0 | -0.52 | 0.74 | -0.77 | -0.7 | -0.58 | -0.84 | 3.17 | -0.68 | -0.7 | -0.63 | -0.2 | -0.84 | -0.89 | -0.74 |
Spov3_chr2.02047 (PRX52) | -0.22 | -0.99 | -0.48 | -2.04 | -0.46 | -3.14 | -1.35 | -2.29 | -2.39 | -0.22 | -2.84 | -1.69 | -1.03 | 0.36 | -0.94 | -1.9 | -4.06 | 0.3 | -1.67 | -1.64 | -0.34 | -1.32 | 4.01 | -4.14 | -0.81 | -0.69 | -1.87 | -0.97 | -0.88 | -1.21 |
Spov3_chr2.02884 (ALD1) | -6.34 | -6.8 | -7.86 | - | -3.84 | -8.23 | - | - | - | - | - | -6.52 | -7.94 | - | - | - | - | -1.07 | - | -6.71 | - | - | 4.88 | -4.61 | - | -8.27 | - | - | -6.87 | - |
Spov3_chr2.02983 (TAD3) | -0.33 | -1.04 | -1.33 | -2.09 | 0.87 | -0.77 | -1.36 | -2.45 | -1.63 | -1.94 | -3.38 | -3.03 | 0.42 | 0.3 | -0.48 | -2.46 | -2.97 | 1.28 | -1.97 | -2.67 | -0.96 | -3.6 | 3.94 | -2.3 | -3.64 | -1.47 | -4.69 | -1.99 | -0.63 | -1.74 |
Spov3_chr2.05493 (F6'H1) | -2.92 | -4.52 | - | - | -2.77 | -5.88 | - | - | - | - | - | - | -2.59 | - | - | - | - | 0.74 | - | -3.79 | - | - | 4.79 | - | -5.84 | - | - | - | - | - |
Spov3_chr3.00315 (GUX1) | -0.68 | -0.74 | -0.83 | -0.71 | 0.58 | 0.12 | -0.14 | -0.2 | -0.69 | -0.34 | -0.83 | -0.91 | -0.07 | 0.51 | -0.44 | -0.68 | -0.53 | 0.57 | -0.63 | -0.44 | -0.43 | -0.29 | 2.6 | -0.6 | -0.32 | -0.45 | -0.19 | -0.25 | -0.24 | 0.09 |
Spov3_chr3.01291 (PILS7) | -0.23 | -0.08 | -0.86 | -1.24 | 0.2 | -1.15 | -1.59 | -1.74 | -1.23 | -1.24 | -0.8 | -1.37 | -0.13 | -0.71 | -0.94 | -0.71 | -0.64 | 1.48 | -1.39 | -0.89 | -1.22 | -0.99 | 3.51 | -0.94 | -0.73 | -0.8 | -1.08 | -0.72 | -0.67 | -1.04 |
Spov3_chr3.01505 (CHR) | -4.19 | -4.76 | - | -6.79 | -4.23 | -8.05 | -6.14 | - | - | -7.95 | - | - | -5.84 | -5.15 | -6.45 | - | - | -0.67 | - | - | -7.93 | - | 4.86 | -5.68 | - | - | - | -5.82 | -5.8 | -6.99 |
Spov3_chr3.03783 (ChlADR) | -1.7 | -1.89 | -2.74 | -1.9 | -1.38 | -1.87 | -1.14 | -0.84 | -1.58 | -1.47 | -1.55 | -1.46 | -1.19 | -2.25 | -1.95 | -2.27 | -1.96 | -2.23 | -1.85 | -1.74 | -2.05 | -1.52 | 4.4 | -1.46 | -2.04 | -2.06 | -1.43 | -1.38 | -2.04 | -2.2 |
| - | - | - | - | - | -0.44 | - | - | - | - | - | -1.21 | - | -1.14 | - | - | - | -0.26 | - | - | - | - | 4.78 | - | - | - | - | - | - | - | |
Spov3_chr3.04012 (RFO1) | -1.6 | -1.74 | -3.41 | -1.22 | -0.64 | -1.58 | -1.08 | -1.58 | -0.26 | -1.38 | -0.89 | -1.67 | -0.12 | -1.14 | -0.28 | -1.51 | -0.98 | 0.74 | -0.54 | -0.43 | -1.75 | -0.8 | 3.89 | -1.35 | -1.29 | -0.71 | -1.44 | -1.15 | -1.03 | -1.24 |
Spov3_chr3.04311 (MYB15) | -1.21 | -1.43 | -4.21 | -3.72 | -1.28 | -6.26 | -3.54 | -4.08 | -3.95 | -3.33 | -3.49 | - | -3.48 | -4.66 | -2.55 | -4.53 | -4.46 | 2.1 | - | -2.32 | -4.96 | -4.81 | 4.51 | -5.31 | -3.43 | -4.29 | -5.26 | -2.01 | -3.46 | -5.23 |
Spov3_chr4.01588 (ANNAT2) | -1.16 | -0.97 | -0.95 | -1.31 | 0.13 | -0.87 | -1.41 | -1.37 | -1.09 | -0.32 | -0.66 | -0.91 | 0.83 | -1.96 | -1.8 | -1.13 | -1.38 | 1.39 | -0.36 | -0.82 | -0.53 | -0.52 | 3.28 | -0.93 | -0.48 | -0.51 | -0.0 | -0.37 | -0.8 | -0.42 |
Spov3_chr4.02008 (CORD3) | 0.11 | -2.72 | -0.7 | -2.86 | -0.17 | -2.07 | -0.78 | -1.04 | -0.7 | -2.67 | - | - | -0.96 | -0.15 | -2.45 | -1.64 | -0.4 | 2.26 | -3.11 | -2.19 | -2.44 | -0.37 | 3.74 | -2.25 | -1.11 | -0.44 | -1.17 | -1.08 | -0.96 | -2.99 |
Spov3_chr4.02358 (MGO1) | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.37 | - | - | - | 0.05 | - | - | - | - | 4.77 | -2.15 | - | -2.33 | - | - | -1.01 | - |
Spov3_chr4.02979 (GAPCP-2) | -0.53 | -0.37 | -0.61 | -0.43 | 0.08 | -1.38 | -1.23 | -0.43 | -0.95 | -0.3 | -0.67 | -1.03 | 0.57 | -0.92 | -1.09 | -1.21 | -1.11 | 0.83 | -0.68 | -0.78 | -0.65 | -0.43 | 3.15 | -0.61 | -0.62 | -0.41 | -0.24 | 0.01 | -0.47 | -0.23 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
| -3.08 | -2.96 | - | - | - | -1.24 | - | - | - | - | - | - | - | -3.12 | -1.64 | - | - | 2.38 | - | - | - | - | 4.5 | -1.54 | -3.31 | -1.39 | - | -3.03 | - | -3.06 | |
Spov3_chr4.04043 (CHS) | -0.97 | -2.49 | -4.86 | -4.0 | -0.27 | -5.15 | -4.28 | -3.3 | -4.55 | -2.55 | - | - | -0.9 | -3.5 | -3.72 | -6.92 | -6.81 | 2.17 | -3.7 | -4.5 | -5.13 | - | 4.48 | -7.02 | -5.91 | -6.19 | - | -6.64 | -2.34 | - |
Spov3_chr4.04580 (GAUT3) | -0.09 | -0.44 | -0.6 | -0.82 | 0.36 | -0.4 | -0.01 | -0.77 | -0.66 | -0.42 | -0.55 | -0.71 | -0.65 | 0.3 | -0.46 | -0.23 | -0.5 | 0.64 | -0.59 | -1.95 | -0.47 | -0.99 | 2.78 | -0.4 | -0.92 | -0.19 | -0.45 | 0.41 | -0.27 | 0.0 |
| -0.84 | -1.4 | -1.4 | -2.03 | -0.58 | -1.55 | -1.22 | -1.96 | -1.01 | -1.39 | -1.22 | -1.38 | -1.03 | -1.22 | -1.59 | -1.7 | -1.02 | 1.47 | -1.68 | -1.44 | -1.23 | -1.91 | 3.9 | -1.83 | -1.27 | -1.37 | -1.16 | -1.23 | -0.25 | 0.18 | |
| - | - | - | - | -1.06 | - | - | - | - | - | - | - | 0.91 | - | - | - | - | 2.93 | - | 0.08 | - | - | 4.25 | - | - | - | - | - | - | - | |
Spov3_chr5.00141 (GLR3.6) | -0.46 | -0.42 | -1.7 | -2.35 | 0.12 | -1.06 | -1.36 | -1.98 | -1.88 | -1.13 | -1.74 | -1.55 | -1.49 | 0.29 | -0.5 | -1.25 | -0.99 | 0.8 | -2.05 | -1.54 | -1.85 | -3.59 | 3.96 | -2.06 | -2.46 | -1.61 | -0.95 | -1.43 | -0.5 | -0.75 |
| -1.84 | -4.04 | -4.75 | -4.97 | -2.06 | -3.67 | - | -5.58 | -6.74 | -4.1 | -5.31 | -5.45 | -0.82 | -0.47 | -2.62 | -4.49 | -4.76 | 2.43 | -5.96 | -7.82 | -5.36 | -5.58 | 4.46 | -4.99 | -5.39 | -7.94 | - | -5.85 | -3.42 | -6.74 | |
Spov3_chr5.01019 (ADF11) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.89 | - | - | - | -2.66 | - | -2.2 | - |
Spov3_chr5.01176 (CHS) | -0.84 | -2.55 | -6.14 | -3.87 | -0.68 | -3.98 | -3.82 | -4.66 | -3.12 | -2.67 | -3.96 | -4.36 | -2.21 | -2.18 | -2.81 | -4.01 | -4.11 | 2.19 | -5.53 | -4.61 | -4.62 | -4.8 | 4.47 | -3.31 | -5.35 | -4.78 | -4.42 | -4.55 | -2.44 | -5.42 |
Spov3_chr5.01178 (PME17) | -5.42 | -3.36 | -3.29 | - | -3.01 | - | - | - | -4.67 | -5.7 | -6.49 | -6.78 | -2.03 | -0.74 | -4.19 | - | -4.67 | 2.55 | -4.71 | -5.21 | -3.72 | -3.79 | 4.48 | -5.07 | -3.48 | -5.77 | -5.15 | -4.46 | -4.17 | - |
| -2.91 | -5.1 | -6.16 | - | -2.58 | - | - | -6.05 | - | - | - | - | -1.98 | -3.38 | -1.22 | - | -4.91 | 0.42 | - | -5.18 | - | - | 4.76 | - | - | - | -4.76 | -3.5 | -2.7 | -5.29 | |
Spov3_chr5.01991 (REF6) | - | - | - | - | - | - | - | - | - | - | - | -0.33 | - | - | - | - | - | 2.13 | - | - | - | - | 4.53 | - | - | - | - | - | - | 0.84 |
| -0.28 | -0.13 | -1.18 | -1.28 | 0.75 | -1.72 | -0.94 | -1.28 | -1.24 | -0.91 | -1.22 | -1.55 | -0.88 | -0.41 | -2.03 | -0.99 | -1.89 | 1.47 | -1.21 | -2.02 | -0.91 | -1.32 | 3.58 | -0.77 | -1.13 | -0.97 | -1.1 | -0.69 | -0.38 | -0.46 | |
| - | - | -2.45 | - | - | - | - | - | - | - | -4.13 | - | 0.66 | - | - | - | - | -1.02 | - | - | -2.16 | - | 4.76 | -2.23 | - | - | - | -2.89 | - | - | |
Spov3_chr6.03063 (CAR7) | -1.6 | -1.79 | -2.16 | -4.64 | 0.09 | -2.07 | -3.69 | -2.31 | -1.66 | -4.62 | -1.2 | -2.18 | -0.66 | -2.23 | -2.0 | -2.57 | -3.17 | 2.24 | -3.38 | -1.91 | -3.33 | -2.08 | 4.17 | -2.46 | -1.26 | -2.18 | -1.88 | -4.51 | -1.53 | -2.01 |
| - | - | - | -3.12 | -3.34 | - | - | - | - | - | - | - | 0.32 | -1.22 | - | -2.74 | - | 0.22 | - | - | - | - | 4.74 | - | - | - | -3.26 | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.