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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_C0002.00203 (AGL46) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.56 | - | - | - | - | 3.95 | - | -0.03 | - | 0.81 | - | - | - | |
Spov3_C0010.00099 (KCS20) | - | - | - | 0.37 | - | - | 1.77 | - | - | - | - | - | 0.74 | 1.69 | - | - | - | 4.1 | - | - | - | - | 0.73 | - | - | 0.61 | - | - | - | - |
Spov3_C0078.00006 (PPCK1) | -0.7 | -0.92 | 0.07 | -0.1 | -0.8 | -0.72 | -0.5 | -1.04 | 0.04 | -0.67 | -0.65 | -0.97 | -0.68 | -1.57 | -0.97 | -0.55 | -0.62 | 3.42 | -0.01 | -0.1 | -0.2 | -0.28 | -0.23 | -1.78 | -1.01 | -0.67 | -0.53 | -0.82 | -1.19 | -0.8 |
| -1.92 | -0.76 | -2.18 | -4.01 | -3.43 | - | - | - | -3.49 | -1.81 | -3.3 | -3.1 | 1.56 | -2.92 | -3.69 | -3.72 | -6.82 | 4.26 | -1.71 | -4.54 | -1.18 | -2.55 | 1.67 | -2.22 | -1.31 | -2.19 | -1.69 | -1.28 | -3.01 | -6.77 | |
| -3.43 | -1.81 | -2.81 | -5.18 | -3.19 | -4.19 | -6.1 | -4.49 | -4.36 | -2.15 | -4.0 | -5.03 | 1.45 | -3.65 | -4.28 | -3.69 | -4.8 | 4.42 | -2.67 | -4.79 | -2.36 | -2.21 | 1.54 | -3.64 | -2.62 | -2.85 | -2.61 | -1.48 | -4.35 | -5.22 | |
| -1.33 | -2.24 | - | -2.72 | -1.42 | - | - | -3.49 | - | -3.43 | -3.2 | - | 1.43 | -3.49 | -0.24 | - | - | 4.26 | - | - | -1.11 | - | 1.56 | -1.8 | -0.51 | -2.42 | -0.97 | -1.58 | -1.7 | -4.41 | |
Spov3_chr1.02037 (ATPT2) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | 2.25 | - | - | - | - | - | - | - | - | - | - | 4.66 | - | - | - | - | - | - | - | - | - | - | - | - | |
Spov3_chr1.02809 (OCT4) | - | - | - | - | - | - | - | -3.49 | - | -4.7 | - | - | - | -3.18 | - | - | - | 4.86 | - | - | - | - | -1.23 | -3.49 | -4.84 | -3.62 | - | - | - | - |
Spov3_chr1.03545 (ATK4) | - | - | -0.52 | 0.06 | -0.05 | -1.76 | - | - | - | - | - | - | -1.48 | 1.56 | -1.68 | - | 0.41 | 2.93 | - | -0.09 | - | -0.13 | 2.98 | -0.36 | -1.72 | - | - | 1.54 | - | -0.55 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.63 | - | - | - | - | 4.55 | - | 1.86 | - | - | 0.48 | - | - | - | - | - | - | - | |
| -0.56 | -0.33 | -1.27 | -1.41 | -0.63 | -0.3 | -1.06 | -1.85 | -1.39 | -1.06 | -1.34 | -1.0 | -0.14 | -1.16 | -1.34 | -1.18 | -1.28 | 3.89 | -1.33 | -1.32 | -1.69 | -1.31 | -0.49 | 0.11 | -1.19 | -1.06 | -1.32 | -0.9 | -0.79 | -0.62 | |
| - | 0.51 | -1.17 | -0.49 | - | 1.55 | -0.46 | -1.1 | 0.31 | -1.15 | -1.27 | -0.29 | - | 0.94 | 0.18 | -1.27 | -1.19 | 2.55 | -1.13 | -0.41 | -0.68 | -0.49 | 2.1 | - | - | 0.47 | -1.43 | - | -1.06 | 0.63 | |
Spov3_chr1.04874 (AGAP1) | -1.2 | -1.59 | -2.67 | -2.58 | -1.4 | -3.0 | -2.33 | -2.81 | -3.21 | -2.19 | -2.83 | -2.61 | -1.95 | -1.71 | -2.94 | -3.81 | -2.44 | 4.55 | -2.36 | -2.49 | -2.06 | -3.06 | 0.16 | -2.08 | -1.78 | -3.19 | -2.69 | -3.28 | -2.58 | -2.2 |
Spov3_chr1.05211 (F6'H1) | -0.73 | -1.74 | -2.7 | - | - | - | - | -2.68 | - | -1.23 | -1.67 | -1.38 | 1.44 | -0.24 | - | -2.76 | - | 4.16 | - | - | -3.25 | -0.38 | 1.11 | -2.67 | -1.35 | -1.37 | -0.65 | -0.36 | -0.83 | -2.78 |
Spov3_chr2.00009 (DEG27) | -0.85 | -1.15 | -1.33 | -3.1 | -0.66 | -5.03 | -6.54 | -5.22 | -2.62 | -1.1 | -3.1 | -3.37 | 1.07 | -1.83 | -2.67 | -3.55 | -4.16 | 4.15 | -2.54 | -4.57 | -1.06 | -1.49 | 1.62 | -2.25 | -1.09 | -2.0 | -1.2 | -0.89 | -1.32 | -4.46 |
Spov3_chr2.00190 (IDH2) | -0.43 | -0.31 | -0.26 | -0.05 | -0.38 | -0.76 | -0.51 | -0.18 | -0.54 | -0.4 | -0.31 | -0.47 | -0.2 | -0.26 | 0.04 | -0.13 | -0.12 | 2.62 | -0.42 | -0.35 | -0.17 | -0.2 | 0.72 | -0.51 | -0.22 | -0.49 | -0.21 | -0.62 | -0.63 | -0.64 |
Spov3_chr2.00409 (G3Pp4) | -0.66 | -0.64 | -0.66 | -0.35 | -0.13 | 0.11 | -0.09 | -0.15 | -0.6 | -0.77 | -0.1 | -0.35 | 0.47 | -0.22 | 0.4 | 0.04 | 0.31 | 2.21 | -0.45 | -0.13 | -0.39 | -0.29 | 0.3 | -0.25 | -0.19 | -0.26 | -0.22 | -0.55 | -0.57 | -0.25 |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.74 | 3.07 | - | 0.8 | - | 4.18 | - | - | - | - | - | - | - | - | - | - | - | - | |
Spov3_chr2.00902 (WRKY56) | - | - | - | - | - | -0.2 | - | - | - | - | - | - | 1.98 | - | - | - | - | 3.84 | - | - | - | 1.3 | 3.07 | - | - | - | - | - | - | - |
Spov3_chr2.01329 (LYK2) | - | -1.45 | - | -1.83 | - | - | - | - | - | - | -2.45 | - | -0.58 | -1.51 | - | - | - | 4.79 | - | - | - | - | - | - | - | - | -2.78 | - | - | -1.69 |
| -3.19 | -1.49 | -3.38 | - | -2.2 | -4.52 | -3.33 | -1.2 | - | - | - | - | -3.1 | 0.16 | -3.33 | -4.28 | - | 4.6 | -1.97 | -4.3 | -4.06 | - | 1.19 | - | - | -3.08 | - | -3.16 | -4.2 | -4.41 | |
| -2.72 | -3.12 | -5.14 | -3.53 | -2.64 | -3.94 | -2.86 | -3.71 | -2.54 | -1.78 | -2.76 | -2.06 | -2.43 | -2.55 | -3.64 | -4.28 | -2.58 | 4.68 | -2.19 | -2.07 | -3.66 | -2.61 | -2.08 | -3.68 | -2.98 | -2.59 | -2.8 | -2.52 | -2.76 | -2.46 | |
| -0.94 | -0.82 | -0.95 | -1.29 | -0.52 | -0.46 | -0.42 | -0.58 | 0.04 | -0.08 | -0.13 | -0.21 | 0.47 | -0.76 | -0.13 | -0.39 | -0.2 | 2.88 | -0.57 | -0.35 | -0.05 | -0.31 | 0.42 | -0.22 | -0.14 | -0.37 | -0.33 | -0.62 | -0.89 | -1.26 | |
Spov3_chr2.04146 (CYP81D2) | -1.38 | -1.56 | - | -2.93 | - | -4.15 | - | -4.15 | - | - | - | - | 1.76 | - | - | - | - | 4.5 | - | -4.19 | -4.06 | - | 1.08 | -4.13 | -2.17 | -3.15 | -2.2 | -3.75 | - | -3.06 |
Spov3_chr2.04266 (RIC10) | -5.16 | -3.42 | -3.55 | -4.25 | -4.27 | -6.09 | -6.61 | -4.25 | -5.03 | -3.04 | -5.22 | -3.75 | 1.86 | -5.22 | -5.46 | -4.68 | -7.4 | 4.41 | -4.77 | -5.36 | -2.62 | -2.98 | 1.81 | -5.49 | -3.77 | -4.42 | -3.11 | -2.45 | -4.15 | -4.65 |
| -2.54 | -0.51 | -1.01 | -0.88 | -1.2 | 0.14 | -1.28 | -0.62 | -1.81 | -1.11 | -0.68 | -1.0 | -0.65 | 1.55 | -0.48 | -0.6 | 0.81 | 3.02 | -0.28 | -1.19 | 0.18 | -1.26 | -0.57 | -0.06 | -0.57 | -0.33 | -1.26 | -0.53 | -0.93 | 0.33 | |
Spov3_chr2.04778 (CRK34) | - | - | - | - | - | - | - | - | - | - | - | -0.55 | - | - | - | - | -0.33 | 4.83 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr2.04849 (CRK34) | - | - | - | - | - | - | - | - | - | - | - | -0.55 | - | - | - | - | -0.33 | 4.83 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr2.05035 (ARR3) | - | - | - | - | - | - | - | 2.79 | - | - | - | - | - | - | - | - | - | 4.53 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr2.05585 (VPS9) | - | - | - | - | - | - | - | - | - | - | - | - | 3.15 | - | - | - | - | 3.4 | - | - | - | - | 3.39 | - | - | - | - | - | - | - |
| -0.2 | -0.45 | -0.49 | -0.71 | -0.88 | -1.64 | -0.72 | -0.55 | -1.48 | -0.4 | -0.87 | -1.29 | -0.08 | -1.53 | -0.8 | -0.69 | -1.24 | 3.25 | -0.86 | -0.38 | -0.34 | -0.36 | 0.85 | -0.27 | -0.14 | -0.55 | -0.58 | 0.16 | -0.07 | -0.73 | |
Spov3_chr3.02716 (HHT) | -0.56 | -0.57 | -0.71 | -1.07 | 0.2 | -2.14 | -0.73 | -0.45 | -1.14 | -0.69 | -0.47 | -2.44 | -0.14 | -0.66 | -0.7 | -1.31 | -0.86 | 3.62 | -1.47 | -1.65 | -1.31 | -1.53 | 0.71 | -0.51 | -1.23 | -1.3 | -0.76 | -0.25 | -0.84 | -0.13 |
| -2.15 | -1.13 | -2.15 | -3.17 | -3.26 | -1.13 | - | -2.37 | -1.3 | -1.68 | -0.83 | -1.04 | -1.17 | -1.64 | -1.04 | -2.09 | -1.72 | 4.31 | -3.12 | - | -2.3 | -0.4 | -0.25 | -0.6 | -0.14 | -2.23 | -0.23 | - | -3.11 | -2.23 | |
Spov3_chr3.03228 (PDP3) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr3.03780 (ChlADR) | -6.11 | -3.78 | -4.31 | -4.42 | -6.24 | -6.81 | -9.18 | -5.02 | -7.38 | -3.81 | -5.45 | -5.59 | 1.72 | -5.45 | -4.54 | -6.3 | -6.21 | 4.5 | -4.54 | -4.96 | -4.02 | -3.97 | 1.57 | -4.8 | -4.1 | -5.05 | -3.07 | -2.51 | -4.68 | -5.08 |
Spov3_chr3.04200 (SAR1) | - | - | - | -5.83 | -5.64 | -5.71 | -5.75 | - | - | -5.6 | - | - | - | - | - | - | - | 4.89 | -5.63 | - | -5.57 | - | -2.84 | -4.4 | - | -5.67 | -4.69 | - | -5.62 | - |
Spov3_chr3.04248 (CLO1) | -0.38 | -1.08 | -0.55 | -1.32 | -0.57 | -1.28 | -1.19 | -1.76 | -1.34 | -0.85 | -1.48 | -0.44 | -0.91 | 0.41 | -1.44 | -0.64 | -1.49 | 3.97 | -0.99 | -1.22 | -3.03 | 0.29 | -1.21 | -1.68 | -1.85 | -1.28 | -1.88 | -0.95 | -1.65 | -2.95 |
Spov3_chr3.04706 (OPT7) | - | 1.92 | - | - | - | - | - | - | - | - | - | - | - | - | 1.76 | - | - | 4.51 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr3.04777 (CBF2) | - | - | - | 0.23 | -0.15 | - | - | - | -0.85 | - | - | - | - | - | - | - | - | 3.77 | - | - | - | - | 3.6 | - | - | - | - | - | 0.7 | - |
Spov3_chr3.05130 (PUB35) | -0.16 | -0.08 | 0.03 | 0.4 | -0.04 | -1.01 | -2.1 | -0.14 | 0.09 | -0.61 | -0.45 | -1.07 | -1.94 | -0.09 | -1.15 | -0.75 | -0.64 | 3.06 | -1.08 | -1.13 | -0.33 | -0.79 | -0.68 | -0.54 | -1.77 | -0.47 | -0.35 | 0.02 | 0.25 | 0.55 |
Spov3_chr4.00781 (PRX52) | -1.41 | -1.49 | -1.84 | -2.38 | -1.71 | 0.36 | 0.11 | -1.25 | -1.37 | -1.8 | -0.77 | -0.42 | 1.15 | -0.32 | 0.0 | -0.48 | -0.59 | 3.48 | -0.94 | -0.48 | -0.85 | -0.44 | 0.51 | -1.03 | -0.94 | -0.87 | -0.85 | -1.63 | -1.9 | -0.94 |
Spov3_chr4.02258 (CRWN2) | 1.34 | 0.66 | 0.1 | -1.1 | -0.55 | -0.89 | -0.8 | - | -2.46 | -0.73 | -0.74 | -0.25 | -1.04 | 0.52 | -0.83 | -1.69 | - | 3.53 | -0.63 | - | - | -0.35 | 0.29 | - | 0.1 | 0.29 | - | -2.42 | -0.97 | -1.61 |
| -0.97 | -1.08 | -1.96 | -2.85 | -3.14 | -4.58 | - | -4.72 | -3.06 | -0.6 | -2.02 | -3.25 | 1.53 | -2.08 | -5.4 | -3.48 | -4.23 | 4.23 | -1.48 | -3.53 | -1.47 | -1.67 | 0.94 | -2.33 | -1.56 | -1.75 | -1.25 | -0.63 | -1.61 | -6.57 | |
Spov3_chr4.03072 (GSL03) | - | - | - | - | - | 1.49 | 0.49 | - | - | - | - | - | - | - | 0.61 | 0.71 | - | 4.5 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr4.03169 (PNP) | -2.69 | -1.82 | -2.43 | -3.47 | -5.27 | -5.48 | -6.06 | -4.43 | -3.79 | -1.3 | -4.22 | -4.02 | 2.14 | -5.34 | -4.45 | -5.91 | -6.8 | 4.31 | -3.78 | -3.99 | -2.45 | -3.1 | 1.43 | -3.39 | -3.05 | -3.62 | -2.36 | -1.5 | -2.78 | -4.32 |
Spov3_chr4.03360 (GPAT5) | - | - | - | - | - | - | - | - | - | - | - | - | 0.15 | - | - | - | - | 4.35 | - | -0.06 | - | -1.15 | 2.82 | - | - | - | - | - | - | - |
Spov3_chr4.04232 (AtKTI5) | -3.1 | -3.8 | -4.34 | -6.67 | -3.3 | -3.92 | -5.11 | -4.54 | -5.95 | -5.29 | -5.63 | -6.55 | 0.84 | -3.33 | -2.02 | -4.7 | -4.76 | 4.08 | -5.85 | -5.27 | -4.76 | -5.0 | 3.32 | -4.96 | -5.66 | -5.12 | -4.35 | -4.47 | -5.53 | -4.53 |
| - | - | -3.63 | - | -3.98 | - | - | - | - | - | - | - | - | - | - | - | - | 4.9 | - | - | - | - | - | - | - | - | -3.6 | - | - | - | |
Spov3_chr5.02253 (EXT16) | - | - | - | - | - | - | - | -0.66 | - | - | - | - | - | - | - | - | - | 4.88 | - | - | - | - | - | - | - | - | - | - | - | - |
| -0.42 | -0.3 | -0.53 | -0.34 | -0.33 | -0.36 | -0.24 | -0.13 | -0.39 | -0.3 | -0.46 | -0.35 | -0.33 | -0.01 | -0.17 | -0.12 | -0.15 | 2.84 | -0.49 | -0.57 | -0.44 | -0.29 | -0.79 | -0.29 | -0.38 | -0.29 | -0.55 | -0.24 | -0.39 | -0.64 | |
Spov3_chr5.03228 (SDG40) | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.05 | - | - | - | 2.59 | - | - | - | - | 3.65 | 0.87 | - | - | - | - | - | 2.46 |
| -0.81 | -1.35 | -0.75 | 0.7 | -3.29 | -3.43 | -3.71 | -2.71 | -1.91 | -1.6 | -2.94 | -3.27 | 0.88 | -2.81 | -2.63 | -2.47 | -3.18 | 4.12 | -2.24 | -3.24 | -1.52 | -2.38 | 1.84 | -2.68 | -2.16 | -2.43 | -2.04 | -1.94 | -2.39 | -5.92 | |
Spov3_chr5.03915 (CORD6) | - | - | - | - | -4.26 | - | -1.07 | -0.37 | -0.07 | 0.23 | -0.87 | 0.64 | - | - | 0.15 | - | -2.53 | 3.99 | - | 1.73 | -0.29 | - | - | 0.5 | -1.79 | 0.17 | -1.79 | - | - | - |
Spov3_chr5.04157 (UMAMIT34) | - | - | - | - | - | - | -3.02 | - | - | - | - | - | - | - | - | - | - | 4.88 | - | - | - | - | -1.5 | - | - | - | - | - | - | - |
Spov3_chr6.00624 (GSO1) | -0.2 | -0.61 | -0.09 | -0.34 | -0.74 | -1.56 | -1.43 | -1.53 | -0.33 | -0.25 | -0.5 | -0.7 | -1.01 | -1.08 | -0.43 | -1.1 | 0.47 | 3.34 | -0.53 | -0.66 | -0.31 | -0.44 | -0.32 | 0.17 | 0.01 | -0.74 | -0.43 | -0.8 | -0.9 | -2.6 |
Spov3_chr6.00944 (GSTU10) | -0.6 | -0.47 | -0.31 | -0.11 | -0.65 | -0.8 | -1.12 | -0.36 | -0.86 | -0.3 | -0.59 | -0.66 | -1.01 | -0.2 | -0.45 | -0.37 | -0.59 | 3.37 | -1.24 | -0.95 | -0.58 | -0.99 | -0.88 | -1.19 | -0.64 | -0.22 | -0.37 | -0.6 | -0.02 | -0.21 |
Spov3_chr6.00945 (GSTU10) | -0.73 | -0.73 | -3.06 | - | -3.47 | -3.31 | - | - | - | -3.22 | -1.98 | - | - | 0.43 | -3.29 | -1.95 | - | 4.65 | -3.45 | - | - | - | -2.03 | - | - | -0.65 | -1.88 | -3.11 | - | - |
| -1.42 | - | -2.02 | -0.94 | -2.12 | -0.95 | -1.46 | -1.15 | -0.99 | 0.08 | 0.08 | -2.19 | 0.37 | 0.82 | -1.24 | -1.35 | -2.05 | 3.72 | 1.28 | -2.26 | -1.56 | -0.78 | -0.8 | - | -1.3 | -1.12 | -0.86 | -0.11 | -3.1 | -0.77 | |
| 0.48 | 1.01 | -2.51 | -0.75 | -1.6 | 0.69 | -0.71 | -2.49 | - | -0.95 | -0.17 | - | 0.34 | -0.08 | -1.09 | -0.12 | 0.16 | 2.83 | - | -0.68 | - | -0.44 | 2.11 | -2.66 | -1.61 | - | -1.17 | 0.45 | -0.45 | 0.22 | |
Spov3_chr6.02626 (CLPP5) | - | - | -4.62 | - | - | -3.34 | -4.92 | - | - | - | -4.72 | - | -3.55 | -3.73 | -1.66 | -3.6 | -3.52 | 4.79 | - | -1.42 | - | - | -0.43 | - | -4.76 | -4.85 | - | - | -3.44 | -3.06 |
Spov3_S10.00017 (IQD3) | -1.28 | -0.28 | - | -2.23 | -3.02 | -1.25 | - | -2.02 | - | - | - | -3.14 | -2.97 | 0.94 | - | - | -2.12 | 4.43 | 0.06 | -1.73 | - | - | 0.68 | - | - | -2.13 | -1.94 | -1.14 | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.