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Heatmap: Cluster_95 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
2.17 2.6 1.27 0.76 0.92 1.13 0.83 1.07 1.01 0.87 0.8 0.81 1.29 2.64 1.04 0.93 0.81 0.77 0.56 0.73 0.66 0.65 0.48 0.66 0.84 0.78 0.74 1.25 1.43 1.44
14.61 14.2 8.97 6.2 8.43 4.01 4.0 3.96 5.53 5.49 4.32 4.27 4.15 8.37 4.63 3.63 3.69 11.13 4.63 4.02 4.69 4.44 9.36 3.83 4.21 4.32 4.48 6.35 8.75 6.73
33.55 34.65 28.64 26.68 28.18 28.64 23.97 21.2 23.12 22.05 20.31 21.41 18.6 38.7 26.5 26.68 28.18 27.74 23.36 22.66 24.41 23.31 28.65 21.66 20.12 21.43 20.3 25.49 23.18 22.61
1.08 1.36 0.67 0.53 0.75 0.75 0.42 0.52 0.53 0.71 0.33 0.42 0.24 1.6 0.48 0.35 0.48 0.47 0.58 0.41 0.47 0.46 0.47 0.64 0.34 0.39 0.5 0.59 0.74 0.46
50.48 55.53 33.87 28.18 24.36 28.78 26.07 22.72 28.03 35.93 27.94 28.98 9.83 65.89 31.37 34.27 33.24 56.66 31.83 25.18 34.19 29.92 16.39 35.03 30.12 31.3 28.75 29.28 32.8 38.44
50.48 55.53 33.87 28.18 24.36 28.78 26.07 22.72 28.03 35.93 27.94 28.98 9.83 65.89 31.37 34.27 33.24 56.66 31.83 25.18 34.19 29.92 16.39 35.03 30.12 31.3 28.75 29.28 32.8 38.44
9.26 8.19 5.31 4.11 4.41 4.24 3.91 3.89 4.25 5.2 4.74 4.77 4.13 7.06 4.95 3.98 4.4 6.95 4.01 3.78 4.89 4.36 6.65 5.38 4.17 4.45 4.74 5.62 5.7 4.12
56.98 43.87 32.5 20.91 28.28 24.75 27.29 23.55 25.81 34.4 25.34 27.86 20.8 71.42 32.15 24.02 27.24 40.83 28.73 26.28 28.99 25.09 27.18 26.05 28.2 26.47 23.84 37.3 36.05 26.15
38.33 35.29 29.43 27.96 31.34 18.1 20.38 21.49 18.83 17.48 12.78 12.57 15.06 34.98 29.81 23.31 24.41 22.08 20.17 19.84 18.83 19.31 36.37 11.24 11.21 12.3 12.82 16.41 25.82 13.94
2.53 2.97 2.19 1.16 1.15 0.89 1.26 0.63 1.36 0.81 0.84 0.93 1.13 2.58 1.5 1.45 0.93 0.87 0.2 0.36 0.91 1.05 0.7 1.0 0.49 1.02 0.9 1.55 1.95 1.04
29.57 27.21 20.48 19.33 24.34 11.21 11.18 12.12 15.69 16.92 12.07 12.37 12.84 19.0 10.46 11.31 11.06 21.91 13.32 12.21 15.05 15.57 25.53 11.03 12.07 11.6 12.61 18.77 18.4 15.71
4.36 4.75 2.7 1.81 3.18 2.23 2.21 2.22 2.0 2.37 1.53 1.51 1.36 4.19 2.07 1.65 1.65 2.05 1.95 1.67 1.83 2.1 1.5 1.99 1.63 1.79 2.0 2.18 2.71 1.59
40.0 36.96 11.32 9.56 6.61 3.93 3.11 2.73 2.03 1.62 2.75 3.51 1.39 20.46 3.4 2.61 2.43 42.06 4.58 5.25 5.57 7.64 9.14 5.03 2.93 2.66 2.13 5.59 10.45 5.12
1.21 1.06 0.67 0.6 0.8 0.63 0.52 0.48 0.55 0.65 0.43 0.44 0.36 1.23 0.58 0.37 0.36 0.74 0.34 0.4 0.48 0.45 0.63 0.5 0.51 0.51 0.5 0.78 0.82 0.65
Spov3_chr1.04564 (PP2C.D6)
 36.06 31.41 27.8 28.4 28.62 22.91 21.84 21.79 24.87 25.7 25.17 21.88 29.17 35.65 28.99 26.01 26.43 34.38 23.05 22.04 22.51 22.94 39.48 22.74 24.1 22.54 24.84 25.35 21.81 26.45
112.47 54.26 27.44 26.05 13.14 10.5 5.08 5.89 16.52 15.08 7.0 5.73 5.46 113.14 8.45 5.12 3.51 21.9 4.41 5.24 3.8 5.23 33.42 6.04 2.94 5.05 4.34 20.03 19.59 14.43
21.63 18.85 10.03 8.86 9.44 6.82 5.79 4.92 8.79 9.4 7.65 7.61 5.75 17.95 7.78 6.08 6.03 8.57 5.95 6.1 7.1 8.23 7.08 6.91 5.69 6.43 7.41 11.81 9.86 7.78
22.93 25.8 16.61 10.26 22.01 7.79 5.18 6.72 11.46 13.76 6.82 9.06 4.26 18.81 6.75 6.76 6.82 13.95 5.42 6.01 8.24 5.98 13.07 8.13 7.61 8.37 7.61 15.28 15.56 9.29
4.4 4.92 3.45 3.38 2.91 2.86 2.37 2.42 1.72 2.38 2.46 2.23 2.57 4.01 3.02 3.03 2.86 4.57 2.31 2.34 2.89 2.97 2.92 2.23 2.23 2.46 2.13 3.66 2.9 2.52
17.07 15.73 7.92 5.12 8.18 5.44 4.5 3.87 6.94 7.31 5.65 5.75 3.72 13.49 3.73 3.93 3.27 7.39 5.01 5.73 5.99 6.8 7.63 5.12 4.46 4.96 4.92 8.68 8.23 6.58
24.56 25.3 16.98 13.69 16.55 14.35 11.38 9.61 13.01 15.34 13.15 14.15 6.6 35.59 16.09 16.06 16.58 18.8 13.0 10.12 15.61 14.68 10.13 17.17 15.9 14.12 13.53 20.28 16.92 13.87
24.24 20.93 15.98 14.03 13.18 13.77 15.7 16.26 16.05 17.73 16.17 16.31 13.86 29.19 15.96 15.15 15.56 22.01 14.9 15.43 14.43 14.93 16.51 16.47 15.1 14.57 14.86 17.4 15.21 13.93
18.27 16.25 8.09 7.87 9.46 4.43 2.95 4.36 6.84 8.22 6.4 6.81 5.48 12.43 3.5 4.19 3.39 14.24 4.13 4.17 5.23 5.55 10.25 4.47 4.4 5.46 5.77 13.79 7.99 5.77
2.82 3.31 2.17 2.97 1.77 1.47 1.48 1.34 1.8 1.86 1.66 1.75 1.76 2.38 2.08 2.3 2.1 3.82 1.62 1.53 2.12 1.99 2.32 1.64 1.46 1.66 1.75 2.28 1.69 1.92
7.79 7.62 5.26 4.57 5.72 5.88 5.74 3.8 4.75 4.92 3.81 4.36 3.91 7.26 5.16 4.63 4.47 6.77 4.34 4.46 4.48 4.73 6.29 3.89 3.76 3.9 3.84 5.68 5.52 5.51
4.02 4.13 2.69 3.06 2.72 2.17 2.24 2.88 2.02 2.21 1.98 2.41 2.35 3.8 3.07 2.56 2.79 3.47 2.06 2.18 2.37 2.36 3.48 1.72 1.75 2.35 2.21 2.26 2.14 2.94
98.45 110.03 82.61 58.11 42.36 30.77 36.06 30.74 32.47 29.85 22.97 24.37 28.1 38.4 47.81 36.19 35.31 51.11 42.78 42.77 41.01 44.24 90.15 24.65 22.73 25.46 24.61 39.31 35.83 23.01
6.76 5.89 4.19 3.03 3.05 3.08 1.91 1.65 2.55 3.4 2.79 2.52 1.87 8.9 3.73 2.92 3.05 5.71 1.76 1.78 2.76 2.52 2.78 2.88 2.31 2.47 2.7 2.81 4.84 1.81
3.57 4.0 2.41 1.3 2.97 1.75 1.17 0.59 1.13 1.69 1.33 1.12 0.88 5.67 1.92 2.28 2.35 4.36 1.51 1.09 1.6 1.28 0.96 1.25 1.88 1.31 1.04 2.16 2.18 1.79
9.52 7.66 4.99 4.32 7.91 1.5 1.16 0.95 2.47 2.17 1.01 1.02 0.76 7.85 1.75 1.23 1.07 7.76 1.99 2.38 2.23 2.76 5.11 0.85 0.74 0.97 0.9 2.5 5.7 2.94
37.12 41.96 19.87 22.19 16.63 15.91 14.39 20.0 16.87 12.47 13.3 16.58 16.51 37.75 24.23 21.64 10.19 19.75 6.0 8.07 17.71 22.13 14.85 16.13 12.39 8.62 12.58 21.83 26.35 13.59
2.65 2.78 2.01 1.2 1.2 1.11 1.17 1.48 1.54 1.3 0.93 1.3 1.68 2.57 1.18 1.23 1.31 1.08 0.4 0.62 1.22 1.23 0.83 0.77 0.61 0.88 0.86 1.31 2.3 1.95
2.89 3.12 2.49 1.25 1.37 1.47 1.08 1.43 1.4 1.42 1.08 1.55 1.24 2.41 1.43 1.12 1.15 0.85 0.65 0.61 1.13 1.72 0.77 0.97 0.82 0.99 0.98 2.11 1.99 1.99
3.24 3.63 2.16 1.99 1.76 2.02 1.09 1.95 2.72 1.84 1.41 1.74 1.65 3.82 1.72 2.04 1.84 1.76 0.85 0.78 0.94 2.15 1.42 1.72 0.85 1.88 1.57 1.99 2.47 2.53
7.5 7.05 3.36 2.76 4.33 2.91 2.75 3.2 2.49 3.22 2.24 2.45 2.05 6.34 2.7 2.23 2.34 6.36 2.5 2.14 2.17 2.43 4.4 2.2 2.24 2.66 2.74 6.44 4.34 2.94
Spov3_chr3.00884 (UBDK GAMMA 7)
 29.17 29.95 19.19 18.36 23.44 21.32 20.45 16.11 16.17 17.86 18.32 18.6 19.73 23.2 21.98 19.33 18.75 18.5 17.14 15.65 17.19 17.18 22.13 17.66 16.21 18.53 18.19 23.14 19.25 22.9
47.9 39.82 36.67 31.39 41.12 29.41 29.34 26.56 31.19 28.75 27.16 27.08 22.85 47.75 32.26 31.14 28.67 23.32 25.5 25.84 26.41 26.97 32.95 26.13 25.5 25.78 26.28 29.23 32.89 23.15
10.41 10.15 7.7 7.22 7.49 7.04 6.62 5.99 5.62 5.87 6.43 6.43 7.36 8.05 7.85 8.34 8.27 8.3 6.4 5.78 6.77 6.56 8.58 7.05 6.55 6.74 6.87 7.21 6.18 6.13
88.07 86.52 15.8 6.48 13.82 6.97 4.5 3.24 3.09 5.21 3.75 4.53 6.84 47.56 5.36 4.04 3.65 82.08 7.42 6.08 8.18 7.86 11.42 8.7 3.56 4.12 2.99 9.38 9.12 7.35
1.82 1.82 0.98 0.66 0.99 0.73 0.79 0.93 0.83 0.81 0.59 0.59 0.55 1.47 0.75 0.58 0.63 0.54 0.64 0.66 0.83 0.8 0.53 0.72 0.64 0.68 0.6 1.0 0.83 0.56
9.4 7.37 5.9 6.08 6.07 4.35 4.7 4.1 5.57 5.38 4.68 4.63 4.06 8.25 4.62 4.5 4.22 4.9 4.34 4.0 4.73 4.4 5.03 4.81 4.62 4.64 4.82 5.65 6.08 4.64
4.29 4.23 2.37 1.77 2.37 1.55 1.57 1.75 1.98 2.39 1.43 1.69 1.31 4.12 1.47 1.34 1.38 3.12 1.6 1.45 1.59 1.43 2.92 1.77 1.26 1.68 1.65 2.23 3.09 1.56
33.46 30.56 18.85 13.09 23.77 9.97 9.29 10.3 13.39 13.31 8.92 9.37 7.65 23.67 12.45 10.18 9.82 21.5 10.48 10.7 10.92 10.95 19.0 9.34 7.89 8.96 9.06 15.52 20.69 11.28
9.89 9.64 9.24 8.81 10.51 8.14 8.38 8.46 8.13 7.77 7.47 8.0 8.43 12.09 9.89 9.08 9.09 9.39 7.28 7.08 6.48 6.65 9.44 7.69 6.9 6.79 7.46 8.44 9.04 7.74
12.09 11.14 9.74 8.74 9.03 8.95 9.74 8.34 9.77 9.9 8.51 7.96 7.52 16.3 9.77 9.37 10.37 9.59 8.28 7.85 8.5 8.8 8.54 8.14 8.09 8.78 9.05 10.87 9.3 9.96
39.13 38.09 30.43 25.37 37.38 31.1 28.83 21.03 30.15 29.2 28.2 28.76 25.21 48.5 30.55 30.89 30.18 22.31 28.1 26.86 28.2 29.62 36.96 27.75 27.89 27.5 29.44 28.81 28.63 24.49
30.26 25.71 25.54 24.96 33.5 22.72 23.24 19.93 23.29 23.08 23.53 21.49 22.73 37.82 26.7 22.12 22.61 22.03 22.22 19.95 20.77 21.37 27.39 20.4 21.02 20.43 22.3 25.15 24.87 17.0
80.25 66.08 45.23 31.37 52.72 24.37 18.93 14.21 31.72 27.39 21.29 22.81 12.41 58.94 23.96 19.71 19.88 32.94 20.15 20.13 24.22 20.96 53.18 22.74 19.45 19.94 20.12 46.52 37.05 21.58
20.34 21.93 17.92 15.65 20.1 13.04 11.14 13.6 14.74 14.25 13.01 13.39 13.83 17.23 13.12 11.94 13.29 17.62 12.07 13.69 12.88 12.64 21.17 14.01 12.58 13.31 13.57 16.39 15.13 14.56
19.84 20.63 13.25 12.28 14.55 9.36 7.51 5.97 9.1 11.02 9.3 8.45 6.81 15.63 9.74 10.52 8.46 18.44 9.98 9.21 11.25 11.06 12.07 9.05 8.34 7.76 8.63 9.62 10.72 11.6
5.38 4.24 1.99 1.48 2.43 0.86 0.83 0.89 0.99 0.78 0.67 0.79 0.56 3.63 1.23 0.77 0.59 1.46 1.12 0.78 1.15 0.89 4.77 0.59 0.8 0.58 0.68 1.5 1.29 0.55
289.55 238.11 170.35 132.69 119.91 112.91 96.67 82.65 114.35 113.99 103.32 104.94 124.26 217.9 149.1 124.17 120.98 226.87 113.75 109.08 118.09 120.24 252.25 105.04 93.64 102.37 97.73 133.65 131.29 129.36
11.37 10.52 8.47 6.46 7.82 5.19 5.05 5.55 6.69 6.7 5.39 5.54 4.8 8.76 5.63 4.69 4.97 10.17 5.72 5.0 6.26 6.3 10.52 5.66 5.23 5.77 5.88 8.1 7.12 6.03
6.54 6.12 5.27 4.79 5.59 4.22 4.29 4.39 4.64 5.07 4.36 4.26 4.35 6.58 4.37 4.49 4.7 6.19 4.14 3.47 4.44 4.25 5.43 4.75 4.08 5.05 4.71 6.61 5.68 5.27
Spov3_chr5.01571 (emb1967)
 3.88 4.04 2.81 2.78 3.19 2.3 2.09 2.11 2.13 2.63 2.27 2.46 2.2 3.68 2.44 2.55 2.3 2.74 2.12 1.65 2.11 2.07 3.23 2.07 2.13 2.38 2.41 3.42 2.94 2.65
1.59 1.88 0.99 0.64 0.91 0.52 0.84 0.85 0.62 0.87 0.48 0.41 0.67 1.28 0.51 0.44 0.55 0.57 0.39 0.4 0.62 0.79 0.54 0.6 0.39 0.54 0.59 0.9 0.65 0.37
9.0 7.23 4.98 4.08 6.19 3.41 3.01 3.16 3.74 3.95 3.01 3.3 3.13 8.39 3.78 3.38 3.47 5.2 3.0 3.15 3.67 3.19 5.72 3.34 3.15 3.22 3.28 7.1 5.36 3.7
16.4 17.16 10.52 7.59 8.09 6.94 6.72 7.43 7.11 7.81 5.48 6.39 7.25 11.69 8.2 6.46 5.99 12.38 6.76 7.06 6.97 7.05 13.53 6.33 5.22 6.05 5.76 7.64 9.0 8.64
34.52 28.03 17.51 15.99 15.08 13.0 11.36 10.17 13.61 15.45 13.82 14.04 11.13 24.42 13.54 12.1 11.99 28.48 11.53 12.58 12.76 13.67 14.01 13.51 12.97 12.71 12.67 16.62 16.87 16.03
19.22 17.77 10.0 4.18 10.26 5.85 5.9 5.72 7.27 7.79 3.89 3.96 4.15 14.75 5.71 3.95 3.11 14.64 3.43 3.57 3.24 3.34 7.63 3.46 3.63 3.81 3.84 7.8 7.45 2.06
2.44 2.47 1.2 1.01 0.87 0.92 0.78 0.73 1.11 0.82 1.12 0.89 0.62 2.44 1.41 1.52 1.47 1.34 0.38 0.46 0.91 1.16 0.92 0.72 0.5 0.83 0.77 1.14 1.43 0.53
5.36 5.64 4.05 3.96 4.92 3.6 2.99 3.56 3.85 4.1 3.43 3.45 3.61 5.74 3.97 3.59 3.92 3.89 3.29 3.09 3.72 3.62 3.79 3.62 2.94 3.63 3.46 4.53 3.85 4.05
51.71 52.32 40.77 29.36 38.55 29.01 23.5 27.27 25.73 25.17 21.65 22.98 21.19 36.43 34.68 30.52 29.45 29.37 24.03 23.08 25.88 26.09 38.96 30.99 22.89 21.87 20.88 28.66 35.47 28.15
30.03 25.71 17.98 16.39 22.99 15.64 15.43 15.47 14.69 16.84 14.32 15.37 15.04 26.39 17.72 17.14 16.76 23.03 14.68 12.12 16.54 14.97 22.78 17.44 15.41 16.66 17.05 30.86 19.99 17.47

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)