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Heatmap: Cluster_240 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
0.07 0.1 - 0.54 -0.76 - 0.34 1.68 - 1.59 - - -1.92 - 0.0 -1.11 0.69 -1.76 1.31 - - - - 1.75 1.34 0.72 0.9 0.19 0.76 -
1.8 2.18 -0.3 -0.63 - - - -0.5 - 0.16 1.82 0.87 0.07 -0.06 1.5 - - - -1.44 - 0.6 -0.21 - 0.11 - - 0.82 1.12 - -0.43
1.01 0.2 0.61 0.26 0.5 -0.15 0.64 -0.14 -0.05 1.05 -0.32 -0.21 -0.36 0.52 -1.26 - 0.29 -1.29 - - -0.65 -1.26 -0.14 0.63 -0.53 -0.73 0.44 0.68 0.07 0.65
1.99 1.61 - 1.58 - - - - - - 0.85 - -0.07 - - 1.05 1.43 0.66 - - - 0.79 1.4 - -0.18 -0.24 0.83 1.06 -0.1 -
- 0.32 2.04 1.24 0.81 - 0.71 - - - 1.98 -0.22 -0.06 -1.75 - - 1.87 -1.04 -0.01 - - -0.12 - 2.17 - -0.04 - 0.39 - -
- 0.32 2.04 1.24 0.81 - 0.71 - - - 1.98 -0.22 -0.06 -1.75 - - 1.87 -1.04 -0.01 - - -0.12 - 2.17 - -0.04 - 0.39 - -
0.75 1.58 0.03 - -0.17 - 0.91 -0.02 -0.88 0.54 -0.64 -0.52 -1.36 0.75 - -2.74 - 0.46 -2.07 -2.18 0.78 - 1.26 0.54 -1.44 -0.63 1.24 1.39 0.68 -
0.33 0.56 -1.4 -0.04 0.8 -0.08 0.37 -0.37 -0.87 -0.05 -0.26 -0.62 -1.0 0.5 -0.59 0.59 -0.87 -0.47 -0.39 -0.71 0.33 -0.51 0.74 0.54 -0.16 0.33 0.37 0.54 -0.43 -0.47
0.46 0.38 -0.02 0.51 -1.0 -0.98 -1.07 0.45 -0.95 -0.64 0.65 -0.15 0.36 -0.3 0.69 0.2 0.4 -0.68 0.24 -0.12 0.03 0.82 -0.74 -0.31 -0.69 -0.63 0.49 -0.16 -0.6 0.13
- - 2.49 - - - -0.07 1.73 - - 2.19 - - 1.41 - - 1.85 - - - - 1.16 - - - - - 1.48 2.08 -
-0.27 0.22 0.12 0.57 0.17 0.07 -0.15 0.43 -0.48 -0.04 -0.13 -0.39 -0.17 0.16 0.24 -0.07 0.44 -0.37 -0.05 -0.53 -0.38 -0.22 0.14 -0.07 0.45 -0.41 -0.18 0.09 0.04 -0.09
0.29 -1.13 -0.24 -0.24 0.63 1.35 - 1.36 -1.06 -0.27 - -1.4 -0.31 -0.42 1.59 0.76 - 0.09 -1.6 0.13 - - - 0.91 1.62 - 0.33 -0.54 1.15 -1.28
1.82 1.39 1.76 2.05 - - 1.05 -0.53 - - - - 0.86 1.3 0.05 - - - - - 1.19 - 1.78 0.53 0.16 - - - - -
0.87 1.25 -0.55 1.77 0.44 -0.57 -0.48 -1.11 -0.92 -0.57 - -0.69 0.98 0.04 -0.42 0.27 -1.45 -1.18 -0.6 -0.91 -0.2 0.16 0.74 -1.48 -0.19 -0.43 0.47 0.11 -0.35 -0.28
-0.31 1.94 0.99 - -0.43 - 1.42 - - - - -0.35 - 0.6 - -0.35 - 1.79 - -0.47 1.24 - 1.35 -0.46 - - 0.96 1.91 - 0.41
0.83 0.39 0.76 -0.09 -0.13 -2.26 0.3 -1.08 -0.14 1.16 1.33 -1.19 -2.07 -0.43 -0.66 -1.13 0.43 -1.3 -2.18 - 0.67 -1.36 -0.98 0.58 -0.53 0.66 0.02 1.26 -0.02 -0.58
2.34 - 1.14 1.27 - -12.32 -1.33 - 2.05 - - -13.42 1.94 -0.59 2.01 - 0.92 - - - -0.92 0.62 0.69 - - - 0.76 - - -
2.08 0.65 1.23 0.51 1.85 -0.9 - -0.5 - 0.28 -0.11 0.2 -1.62 0.48 0.18 - -1.61 -1.86 - -0.38 -1.7 -0.28 1.47 - -1.72 - - 1.4 -0.1 -1.69
1.31 - 1.43 - - - - - - 2.02 0.71 - - - - - - - - 0.34 0.43 - 2.17 1.35 - 1.35 - 2.45 0.51 -
1.27 0.43 - -0.45 0.26 -2.26 -0.89 0.43 0.4 -2.54 -0.46 1.1 -0.32 0.99 1.23 -0.26 0.05 -0.89 - -1.04 0.09 -0.2 - 0.78 -2.93 0.15 0.41 -0.91 -0.07 1.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.