Heatmap: Cluster_162 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Light: 260 uE m-2 s-1	Light: 195 uE m-2 s-1	Light: 130 uE m-2 s-1 (Control)	Light: 65 uE m-2 s-1	Photoperiod: L24	Photoperiod: L18D6	Photoperiod: L13D11 (Control)	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C (Control)	Temperature: 25°C	Temperature: 30°C
Spov3_C0020.00013	0.76	0.72	0.6	0.68	0.64	0.7	0.53	0.68	0.52	0.58	0.49	0.54	0.55	1.0	0.72	0.74	0.73	0.71	0.47	0.49	0.52	0.52	0.76	0.65	0.58	0.57	0.59	0.59	0.63	0.76
Spov3_chr1.00048	0.88	0.97	0.71	0.57	0.67	0.52	0.56	0.76	0.47	0.61	0.48	0.47	0.46	1.0	0.62	0.58	0.64	0.72	0.44	0.44	0.49	0.51	0.83	0.46	0.44	0.48	0.49	0.87	0.85	0.69
Spov3_chr1.00836 (MIP2)	0.91	0.96	0.86	0.85	0.81	0.73	0.72	0.77	0.72	0.78	0.73	0.71	0.73	1.0	0.85	0.78	0.78	0.73	0.6	0.58	0.69	0.72	0.92	0.69	0.68	0.77	0.82	0.8	0.9	0.99
Spov3_chr1.01206 (JMJ24)	0.83	0.84	0.73	0.74	0.82	0.74	0.64	0.7	0.62	0.66	0.58	0.66	0.74	1.0	0.73	0.67	0.65	0.77	0.55	0.55	0.55	0.59	0.94	0.65	0.58	0.66	0.58	0.72	0.84	0.86
Spov3_chr1.02301	0.84	1.0	0.67	0.87	0.81	0.63	0.46	0.58	0.51	0.54	0.47	0.55	0.58	0.94	0.59	0.63	0.62	0.71	0.5	0.42	0.58	0.54	0.66	0.57	0.5	0.64	0.58	0.79	0.76	0.7
Spov3_chr1.02456	0.77	0.85	0.71	0.71	0.48	0.5	0.42	0.51	0.6	0.7	0.59	0.52	0.61	1.0	0.61	0.53	0.53	0.57	0.34	0.42	0.52	0.46	0.64	0.55	0.61	0.58	0.59	0.82	0.72	0.86
Spov3_chr1.03959 (TPL)	0.78	0.83	0.64	0.62	0.65	0.52	0.54	0.75	0.55	0.63	0.55	0.57	0.61	1.0	0.65	0.55	0.57	0.63	0.46	0.49	0.54	0.54	0.63	0.61	0.55	0.57	0.59	0.76	0.74	0.6
Spov3_chr1.04787 (DML1)	0.81	0.83	0.75	0.79	0.77	0.65	0.56	0.68	0.58	0.6	0.59	0.62	0.64	1.0	0.7	0.66	0.66	0.64	0.5	0.49	0.6	0.59	0.82	0.55	0.6	0.58	0.63	0.7	0.78	0.98
Spov3_chr1.05224 (BRR2)	0.87	1.0	0.82	0.85	0.76	0.64	0.55	0.75	0.66	0.69	0.58	0.58	0.62	0.94	0.69	0.67	0.61	0.69	0.45	0.47	0.57	0.6	0.88	0.59	0.58	0.61	0.61	0.91	0.89	0.78
Spov3_chr2.00127 (EDR2)	0.91	0.9	0.72	0.6	0.74	0.69	0.68	0.77	0.58	0.64	0.63	0.65	0.59	1.0	0.75	0.66	0.69	0.79	0.54	0.61	0.72	0.65	0.95	0.57	0.6	0.64	0.64	0.71	0.71	0.8
Spov3_chr2.00286 (PLL1)	0.85	0.92	0.77	0.79	0.79	0.73	0.68	0.78	0.61	0.66	0.61	0.58	0.78	1.0	0.79	0.72	0.74	0.71	0.55	0.54	0.53	0.6	0.67	0.66	0.62	0.58	0.6	0.83	0.77	0.78
Spov3_chr2.01839 (MYB4R1)	0.76	0.88	0.7	0.75	0.65	0.66	0.52	0.61	0.54	0.57	0.55	0.52	0.57	1.0	0.67	0.68	0.69	0.68	0.44	0.43	0.51	0.5	0.82	0.57	0.48	0.56	0.55	0.62	0.64	0.77
Spov3_chr2.02455	0.89	0.92	0.76	0.83	0.75	0.71	0.65	0.8	0.57	0.66	0.65	0.65	0.8	1.0	0.83	0.76	0.83	0.78	0.58	0.6	0.67	0.67	0.79	0.71	0.66	0.66	0.71	0.88	0.84	0.87
Spov3_chr2.04096 (XPB1)	0.75	0.73	0.64	0.66	0.72	0.6	0.54	0.59	0.54	0.58	0.55	0.58	0.63	1.0	0.67	0.67	0.66	0.69	0.55	0.55	0.64	0.55	0.72	0.57	0.56	0.6	0.65	0.68	0.68	0.75
Spov3_chr3.00328	0.83	0.75	0.67	0.78	0.61	0.59	0.56	0.67	0.56	0.59	0.57	0.59	0.76	1.0	0.72	0.73	0.71	0.75	0.49	0.49	0.55	0.57	0.74	0.6	0.58	0.59	0.64	0.73	0.65	0.69
Spov3_chr3.00370 (RLT1)	0.83	0.88	0.8	0.77	0.77	0.69	0.64	0.82	0.68	0.65	0.62	0.64	0.65	1.0	0.73	0.67	0.7	0.65	0.55	0.55	0.64	0.66	0.76	0.67	0.6	0.65	0.67	0.87	0.82	0.74
Spov3_chr3.00650 (OLI1)	0.77	0.79	0.69	0.73	0.7	0.58	0.59	0.68	0.61	0.73	0.61	0.61	0.63	1.0	0.58	0.6	0.62	0.7	0.58	0.51	0.59	0.6	0.7	0.63	0.58	0.6	0.65	0.84	0.8	0.65
Spov3_chr3.00847 (ATU2AF65A)	0.81	0.9	0.74	0.82	0.76	0.69	0.65	0.8	0.68	0.72	0.63	0.69	0.67	1.0	0.7	0.73	0.72	0.94	0.57	0.54	0.59	0.61	0.66	0.7	0.65	0.64	0.63	0.82	0.87	0.9
Spov3_chr3.01165	0.9	0.94	0.86	0.91	0.89	0.75	0.81	0.9	0.71	0.72	0.7	0.69	0.84	1.0	0.93	0.88	0.86	0.86	0.69	0.71	0.74	0.74	0.88	0.81	0.77	0.74	0.78	0.93	0.91	0.86
Spov3_chr3.01286 (SF1)	0.76	0.83	0.75	0.76	0.63	0.54	0.57	0.67	0.71	0.77	0.64	0.63	0.64	1.0	0.57	0.56	0.57	0.64	0.56	0.53	0.62	0.62	0.7	0.64	0.61	0.59	0.61	0.87	0.81	0.85
Spov3_chr3.01543	0.92	0.93	0.91	0.8	0.8	0.7	0.68	0.83	0.74	0.76	0.7	0.72	0.74	1.0	0.68	0.79	0.77	0.82	0.6	0.57	0.67	0.69	0.73	0.71	0.7	0.69	0.71	0.87	0.9	0.82
Spov3_chr3.01749	0.81	0.9	0.81	0.77	0.64	0.6	0.56	0.71	0.59	0.6	0.59	0.6	0.77	1.0	0.81	0.65	0.67	0.65	0.53	0.56	0.64	0.67	0.83	0.52	0.6	0.66	0.74	0.66	0.72	0.98
Spov3_chr3.03098 (ARI2)	0.75	0.75	0.68	0.61	0.72	0.65	0.61	0.64	0.55	0.67	0.57	0.59	0.58	1.0	0.66	0.63	0.58	0.78	0.48	0.48	0.6	0.56	0.9	0.53	0.49	0.61	0.57	0.6	0.67	0.82
Spov3_chr3.04708	0.87	0.9	0.81	0.83	0.82	0.72	0.58	0.81	0.64	0.66	0.68	0.66	0.67	1.0	0.64	0.78	0.68	0.71	0.6	0.5	0.63	0.61	0.76	0.76	0.66	0.64	0.7	0.78	0.87	0.97
Spov3_chr4.01542 (RIK)	0.73	0.78	0.72	0.71	0.59	0.61	0.62	0.65	0.66	0.69	0.63	0.64	0.73	1.0	0.65	0.67	0.7	0.78	0.52	0.52	0.62	0.62	0.62	0.7	0.58	0.63	0.58	0.73	0.81	0.79
Spov3_chr4.02158	0.95	0.96	0.91	0.83	0.87	0.72	0.72	0.9	0.75	0.76	0.69	0.69	0.71	0.98	0.78	0.76	0.73	0.82	0.57	0.56	0.69	0.74	0.94	0.64	0.65	0.7	0.78	0.97	0.97	1.0
Spov3_chr4.02763 (UVR1)	0.91	1.0	0.85	0.85	0.74	0.63	0.6	0.78	0.67	0.74	0.61	0.64	0.6	0.98	0.65	0.65	0.66	0.8	0.61	0.52	0.6	0.56	0.75	0.71	0.58	0.64	0.69	0.84	0.88	0.77
Spov3_chr4.03239 (GRP5)	0.87	0.88	0.76	0.86	0.83	0.72	0.64	0.76	0.62	0.64	0.61	0.62	0.67	1.0	0.67	0.67	0.67	0.75	0.54	0.56	0.68	0.65	0.78	0.69	0.64	0.63	0.66	0.82	0.86	0.83
Spov3_chr4.04764	0.92	1.0	0.88	0.96	0.73	0.72	0.65	0.86	0.78	0.75	0.77	0.71	0.78	0.98	0.68	0.76	0.76	0.9	0.62	0.59	0.69	0.72	0.88	0.7	0.66	0.68	0.74	0.93	0.92	0.9
Spov3_chr4.04806 (GLE1)	0.76	0.7	0.58	0.55	0.68	0.56	0.45	0.38	0.47	0.47	0.45	0.54	0.52	1.0	0.57	0.55	0.49	0.73	0.39	0.41	0.5	0.47	0.72	0.45	0.44	0.46	0.48	0.57	0.59	0.72
Spov3_chr5.00127 (SAB)	0.86	0.89	0.77	0.75	0.86	0.7	0.66	0.7	0.69	0.72	0.67	0.69	0.72	1.0	0.82	0.68	0.68	0.68	0.6	0.59	0.68	0.71	0.97	0.63	0.63	0.7	0.79	0.79	0.87	0.89
Spov3_chr5.00241 (ARID3)	0.79	0.9	0.84	0.88	0.89	0.77	0.65	0.87	0.65	0.75	0.69	0.67	0.79	1.0	0.8	0.82	0.88	0.83	0.65	0.72	0.77	0.74	0.94	0.79	0.74	0.73	0.78	0.88	0.88	0.84
Spov3_chr5.00654 (JMJ26)	0.84	0.93	0.76	0.8	0.81	0.69	0.52	0.69	0.53	0.62	0.53	0.58	0.54	1.0	0.61	0.57	0.56	0.73	0.47	0.39	0.5	0.54	0.84	0.6	0.52	0.56	0.55	0.82	0.87	0.84
Spov3_chr5.00741	0.84	0.86	0.78	0.74	0.7	0.57	0.53	0.74	0.61	0.62	0.52	0.61	0.61	1.0	0.54	0.63	0.58	0.74	0.47	0.52	0.56	0.48	0.56	0.55	0.49	0.56	0.56	0.75	0.9	0.91
Spov3_chr5.00797 (VPS8)	0.83	0.83	0.74	0.71	0.69	0.6	0.55	0.7	0.65	0.65	0.57	0.59	0.54	1.0	0.66	0.57	0.56	0.66	0.51	0.51	0.54	0.56	0.78	0.54	0.57	0.58	0.6	0.78	0.8	0.69
Spov3_chr5.01026 (RH8)	0.88	0.83	0.81	0.92	0.89	0.81	0.82	0.94	0.77	0.8	0.74	0.79	0.84	1.0	0.95	0.9	0.9	0.86	0.7	0.7	0.79	0.78	0.84	0.85	0.77	0.79	0.84	0.85	0.89	0.82
Spov3_chr5.01548 (LDL3)	0.95	0.91	0.82	0.88	0.8	0.7	0.71	0.86	0.67	0.7	0.69	0.7	0.71	1.0	0.72	0.75	0.68	0.79	0.53	0.54	0.63	0.62	0.85	0.63	0.63	0.66	0.69	0.88	0.86	0.84
Spov3_chr5.01687 (ESD4)	0.75	0.85	0.68	0.77	0.81	0.77	0.68	0.8	0.58	0.65	0.61	0.57	0.63	1.0	0.79	0.78	0.78	0.69	0.55	0.52	0.59	0.59	0.74	0.74	0.61	0.62	0.62	0.78	0.73	0.69
Spov3_chr5.02260 (SAE2)	1.0	0.98	0.9	0.98	0.93	0.69	0.65	0.78	0.72	0.77	0.68	0.67	0.77	0.96	0.73	0.77	0.75	0.84	0.6	0.55	0.75	0.71	0.88	0.72	0.61	0.74	0.78	0.87	0.87	0.78
Spov3_chr5.02602 (MRP5)	0.49	0.57	0.42	0.32	0.38	0.38	0.37	0.41	0.3	0.39	0.27	0.32	0.43	1.0	0.41	0.34	0.32	0.65	0.21	0.22	0.28	0.28	0.65	0.31	0.25	0.28	0.29	0.36	0.48	0.68
Spov3_chr5.02603 (MRP5)	0.49	0.57	0.42	0.32	0.38	0.38	0.37	0.41	0.3	0.39	0.27	0.32	0.43	1.0	0.41	0.34	0.32	0.65	0.21	0.22	0.28	0.28	0.65	0.31	0.25	0.28	0.29	0.36	0.48	0.68
Spov3_chr5.03453	0.75	0.86	0.7	0.7	0.75	0.66	0.63	0.72	0.54	0.63	0.6	0.61	0.55	1.0	0.6	0.64	0.65	0.75	0.55	0.48	0.58	0.57	0.63	0.64	0.55	0.59	0.59	0.79	0.76	0.69
Spov3_chr5.03768 (ACA8)	0.84	0.75	0.59	0.7	0.7	0.53	0.49	0.51	0.48	0.54	0.51	0.55	0.52	1.0	0.69	0.55	0.57	0.68	0.41	0.43	0.45	0.52	0.9	0.5	0.52	0.56	0.58	0.54	0.73	0.72
Spov3_chr5.04166 (UBP5)	0.85	0.86	0.74	0.81	0.75	0.66	0.59	0.66	0.69	0.66	0.64	0.64	0.65	1.0	0.77	0.77	0.77	0.71	0.56	0.55	0.7	0.68	0.76	0.63	0.64	0.7	0.75	0.74	0.76	0.82
Spov3_chr5.04513 (FIP1)	0.75	0.79	0.64	0.69	0.6	0.55	0.49	0.53	0.48	0.55	0.51	0.5	0.55	1.0	0.67	0.75	0.65	0.6	0.45	0.44	0.52	0.51	0.69	0.51	0.45	0.46	0.52	0.67	0.58	0.69
Spov3_chr6.00053 (DUF7)	0.8	0.83	0.71	0.73	0.75	0.64	0.6	0.67	0.6	0.66	0.57	0.61	0.68	1.0	0.72	0.66	0.67	0.64	0.54	0.48	0.57	0.54	0.7	0.64	0.59	0.61	0.62	0.79	0.78	0.69
Spov3_chr6.00114 (SAC3B)	0.9	0.85	0.73	0.79	0.74	0.7	0.64	0.72	0.63	0.69	0.65	0.66	0.66	1.0	0.78	0.73	0.75	0.65	0.52	0.59	0.65	0.65	0.81	0.63	0.64	0.69	0.68	0.75	0.77	0.82
Spov3_chr6.00437 (RCF1)	0.96	0.94	0.79	0.82	0.79	0.65	0.64	0.75	0.56	0.66	0.58	0.6	0.69	1.0	0.72	0.72	0.75	0.76	0.48	0.54	0.59	0.59	0.72	0.63	0.61	0.59	0.58	0.9	0.81	0.87
Spov3_chr6.00531	0.63	0.64	0.52	0.6	0.58	0.52	0.4	0.46	0.4	0.43	0.4	0.45	0.54	1.0	0.75	0.74	0.77	0.61	0.43	0.42	0.54	0.56	0.72	0.51	0.47	0.45	0.47	0.49	0.59	0.68
Spov3_chr6.00867 (JMJ29)	0.9	0.85	0.67	0.69	0.7	0.6	0.55	0.69	0.58	0.65	0.51	0.56	0.63	1.0	0.59	0.6	0.57	0.69	0.5	0.45	0.56	0.56	0.65	0.65	0.58	0.54	0.58	0.87	0.85	0.73
Spov3_chr6.01025 (RL1)	0.82	0.81	0.71	0.71	0.68	0.63	0.56	0.59	0.56	0.63	0.61	0.68	0.62	1.0	0.71	0.62	0.66	0.66	0.54	0.51	0.61	0.56	0.83	0.57	0.54	0.62	0.65	0.72	0.82	0.87
Spov3_chr6.01196 (TAF2)	0.9	0.87	0.82	0.81	0.77	0.65	0.64	0.75	0.7	0.76	0.69	0.72	0.77	1.0	0.76	0.72	0.75	0.68	0.58	0.63	0.69	0.7	0.71	0.71	0.66	0.69	0.73	0.82	0.8	0.87

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)