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Heatmap: Cluster_84 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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(Showing raw values)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
20.42 19.49 19.63 19.35 24.66 26.33 24.61 19.93 21.19 18.96 20.17 22.39 19.3 21.68 24.18 24.15 23.6 22.42 19.18 18.15 19.07 19.59 18.81 21.1 21.46 18.75 18.76 19.61 21.87 19.26
11.98 10.46 9.86 8.83 11.86 10.45 9.65 8.97 9.86 10.64 9.85 10.72 8.95 14.57 10.95 11.24 10.63 9.73 8.34 8.44 9.62 9.54 10.03 8.56 9.44 9.77 10.04 9.62 10.88 13.09
0.69 0.71 0.49 0.53 0.92 1.29 1.35 0.61 0.68 0.65 0.75 0.8 0.76 0.71 1.23 1.08 1.1 0.34 0.77 0.41 0.79 1.0 0.82 0.89 0.74 0.8 0.76 0.9 0.8 0.76
6.33 7.53 4.73 4.21 5.45 5.41 4.47 4.98 4.25 4.8 4.16 4.27 4.08 6.12 4.54 5.33 4.54 5.98 3.15 2.78 3.67 4.0 5.19 4.26 4.16 4.48 4.75 5.68 5.82 4.98
3.04 3.22 2.96 3.01 3.4 3.17 2.81 2.97 2.98 2.8 2.63 2.8 2.68 3.57 2.98 3.12 2.96 2.74 2.45 2.31 2.49 2.56 2.62 2.81 2.42 2.9 2.74 3.44 3.43 3.06
51.5 46.41 61.4 61.13 60.52 52.76 51.03 28.23 65.87 67.77 70.84 60.74 46.41 20.56 64.87 77.17 82.66 23.91 66.95 56.02 68.37 63.98 46.48 58.39 68.14 70.11 61.49 54.24 55.56 74.83
6.81 6.32 6.59 5.9 8.23 7.2 6.37 5.47 6.25 6.33 7.18 6.63 7.51 7.56 8.67 8.46 8.15 4.55 5.67 5.38 6.52 6.5 7.19 6.52 5.74 6.13 5.94 7.03 7.64 7.38
4.91 5.06 3.73 3.06 5.61 6.09 5.75 4.43 3.34 3.52 3.52 4.29 3.69 5.62 4.98 4.67 4.32 3.74 3.33 3.3 3.67 3.76 3.88 4.47 3.33 3.89 3.72 4.17 5.09 4.74
39.05 36.49 42.95 38.04 53.33 49.58 47.32 44.47 44.68 39.24 39.43 40.99 36.52 46.57 62.56 55.02 55.91 25.26 37.28 37.42 39.5 42.89 53.24 47.59 42.59 44.95 43.49 46.19 50.6 37.62
Spov3_chr1.00358 (PFA-DSP3)
 22.61 22.66 26.55 24.08 30.57 32.76 36.18 32.47 29.48 23.56 30.97 29.5 35.47 27.67 35.06 34.68 36.17 11.02 31.91 36.37 30.1 31.47 37.47 23.81 25.94 31.66 31.35 25.96 16.34 17.66
0.85 0.95 0.88 0.6 1.58 1.94 1.6 0.97 1.18 1.3 1.3 1.22 0.97 1.73 1.54 1.39 1.35 0.75 0.94 0.96 1.34 1.49 1.67 1.49 1.28 1.37 1.25 1.06 1.12 0.66
0.77 0.84 0.63 0.61 0.8 0.76 0.65 0.58 0.73 0.71 0.58 0.71 0.6 0.98 0.75 0.83 0.68 0.7 0.56 0.46 0.63 0.57 0.61 0.64 0.55 0.77 0.71 0.75 0.74 0.85
10.14 9.19 7.75 7.83 10.11 12.0 13.39 10.35 11.61 10.0 11.89 12.5 9.95 5.67 13.17 12.22 12.91 7.29 8.54 10.08 11.34 9.84 9.56 11.39 11.89 12.07 11.45 10.8 11.48 10.43
28.1 26.82 27.0 23.86 27.82 30.7 31.14 23.48 30.4 27.95 28.48 30.38 25.38 27.57 31.11 28.67 28.64 19.16 27.34 27.91 27.19 28.99 36.18 28.67 27.79 28.39 26.81 26.34 26.54 26.26
17.14 20.14 14.14 13.44 16.69 18.02 16.04 15.46 15.55 15.12 13.8 14.56 14.34 19.12 15.85 17.11 15.08 14.85 10.31 11.03 12.81 13.54 15.54 15.6 12.55 13.78 13.67 16.0 17.69 19.78
1.91 1.98 1.48 1.54 1.38 1.61 1.6 1.51 1.7 1.48 1.67 1.33 1.51 2.41 1.82 1.57 1.49 1.37 1.15 1.39 1.62 1.44 1.0 1.5 1.39 1.27 1.33 1.43 1.87 2.33
103.45 110.06 152.23 145.22 136.75 245.08 199.94 114.73 167.12 118.12 165.47 192.72 134.39 8.91 166.52 188.87 198.75 43.46 128.02 146.39 160.08 143.45 31.44 83.74 117.04 131.9 111.02 96.42 82.98 147.92
5.77 4.36 4.38 5.23 6.4 7.37 5.96 5.55 4.7 4.13 4.33 4.95 5.22 3.96 7.05 6.48 6.49 1.67 4.58 4.22 4.49 4.7 4.38 5.71 5.11 5.27 5.15 6.06 5.07 4.9
132.07 90.31 77.12 83.1 136.93 161.28 158.61 138.36 73.64 71.73 70.86 77.62 77.88 138.81 173.37 143.22 85.7 140.63 63.01 67.46 70.53 67.5 92.93 89.02 98.38 66.15 69.72 77.34 73.79 73.31
10.64 10.6 9.62 9.73 10.13 11.26 12.87 11.16 8.86 7.85 9.32 9.9 11.17 13.54 12.48 11.07 10.92 8.33 8.79 9.37 9.2 9.88 12.21 9.09 9.69 9.14 9.56 9.9 10.09 10.87
0.52 0.68 0.5 0.46 0.46 0.46 0.37 0.38 0.52 0.42 0.4 0.4 0.34 0.59 0.37 0.44 0.41 0.6 0.31 0.32 0.44 0.33 0.55 0.35 0.33 0.39 0.4 0.52 0.51 0.6
1.85 2.41 1.73 1.67 1.3 1.6 1.49 1.42 1.75 1.45 1.46 1.58 1.45 2.32 1.51 1.71 1.45 1.77 0.86 0.94 1.24 1.18 1.14 1.57 1.2 1.34 1.43 1.95 2.13 2.46
33.47 32.57 43.39 50.6 41.99 52.05 46.47 33.31 47.17 41.06 51.84 45.75 53.47 18.62 59.03 62.28 62.28 32.11 42.38 41.08 45.22 44.89 41.82 39.17 48.26 48.05 51.77 32.0 38.78 45.05
12.3 11.92 10.28 11.18 13.81 13.27 13.39 10.96 9.72 10.21 11.09 11.0 13.5 10.15 14.32 13.33 13.74 7.53 9.0 9.0 10.67 11.51 11.37 12.55 11.85 10.37 10.56 12.33 13.22 11.07
Spov3_chr1.05114 (KICP-02)
 4.14 3.88 4.13 3.41 6.22 5.99 6.21 5.3 4.59 4.6 4.66 5.19 6.5 6.46 5.67 4.85 5.0 2.58 4.7 5.41 3.99 4.05 5.64 4.42 4.0 4.54 4.28 4.98 4.8 4.73
0.33 0.39 0.25 0.15 0.37 1.16 0.74 0.66 0.46 0.41 0.35 0.6 0.5 0.54 0.79 0.61 0.47 0.41 0.34 0.31 0.37 0.27 0.25 0.66 0.38 0.61 0.43 0.4 0.5 0.62
6.17 5.96 5.15 4.72 6.43 6.87 7.42 6.43 6.08 5.96 5.76 6.17 5.54 7.17 7.4 6.57 6.28 4.91 4.82 5.1 5.59 5.38 5.97 7.32 5.9 6.36 5.96 5.62 5.81 5.4
10.94 11.26 14.9 14.72 12.49 12.64 14.16 15.63 15.84 13.01 13.76 14.5 9.82 6.18 19.18 17.38 17.99 8.42 11.47 12.42 15.23 14.4 12.08 12.81 12.16 14.08 13.68 14.05 13.2 11.32
7.14 7.75 5.81 5.5 9.55 7.79 5.01 5.49 5.48 5.31 6.43 6.45 7.67 8.08 7.74 8.83 9.08 7.49 5.33 5.69 5.83 6.82 7.46 6.43 6.54 5.39 6.22 7.55 8.83 8.11
2.6 2.68 2.29 2.09 2.31 2.48 1.91 2.29 1.71 2.07 1.91 2.57 2.04 3.3 2.6 2.85 2.45 2.52 1.73 1.68 2.08 1.88 2.1 2.0 1.9 2.43 2.03 2.22 2.22 3.36
5.08 4.45 3.98 3.29 5.65 5.46 4.78 5.18 4.43 3.83 4.14 4.56 4.17 6.84 4.33 4.71 4.65 3.93 3.24 3.27 3.58 3.65 3.28 3.78 3.54 4.32 3.81 4.36 4.56 4.15
8.37 7.87 7.09 7.98 7.61 6.07 6.86 7.47 6.79 6.2 7.37 7.36 9.28 6.73 8.72 8.16 9.1 6.13 6.76 6.65 7.73 6.95 11.39 7.39 8.08 6.83 7.6 8.1 6.12 6.42
3.27 3.03 4.3 4.73 3.93 4.8 5.02 4.39 4.23 4.81 4.44 4.45 4.42 1.75 5.19 5.11 5.56 3.4 5.01 3.87 5.29 4.21 4.6 4.44 4.41 4.63 4.22 3.34 3.41 4.23
16.89 14.02 12.26 10.73 15.04 19.91 15.45 13.78 13.65 13.37 12.87 12.51 13.69 17.64 17.33 14.66 15.91 17.22 11.87 13.0 11.89 13.2 14.61 13.41 14.26 14.22 12.09 15.91 13.32 13.04
13.69 13.9 17.61 22.48 17.37 14.37 16.59 23.89 21.57 21.5 19.9 19.46 15.79 16.59 19.49 17.94 21.68 6.28 16.35 16.07 16.38 15.66 38.82 13.07 15.92 14.19 16.79 21.06 14.45 6.22
1.47 1.44 0.95 0.83 1.29 1.55 0.8 1.05 1.02 0.93 1.05 0.91 0.84 2.19 1.22 1.52 1.67 0.87 1.13 0.82 0.79 0.72 0.31 0.83 0.73 0.98 1.04 1.01 1.04 1.3
6.79 6.07 6.35 6.49 7.36 7.32 6.78 7.99 5.77 5.32 6.16 6.28 6.19 6.67 6.46 6.32 5.98 7.35 5.59 5.62 5.72 5.96 7.16 5.8 5.97 5.8 6.43 6.11 6.62 6.63
44.71 21.5 26.82 31.06 30.31 58.62 68.49 62.72 32.83 25.63 29.36 32.5 35.12 52.97 50.16 54.84 36.95 21.51 17.81 21.58 18.91 21.87 39.42 26.54 23.41 22.11 21.3 23.25 27.14 38.65
4.09 3.46 3.47 3.26 4.4 9.1 6.28 2.46 2.94 3.82 3.1 2.96 2.8 8.7 8.14 9.23 6.79 1.32 4.36 5.55 4.63 8.91 5.15 4.99 2.74 4.89 3.91 4.35 3.71 2.22
Spov3_chr3.01431 (5PTase12)
 0.82 0.9 0.62 0.64 0.85 0.87 0.64 0.97 0.65 0.68 0.57 0.71 0.71 0.81 0.6 0.7 0.66 0.87 0.54 0.53 0.57 0.56 0.87 0.49 0.6 0.7 0.68 0.55 0.85 0.73
216.98 196.22 219.89 219.8 292.57 292.41 293.12 272.31 218.02 211.68 245.1 233.78 258.01 216.81 245.36 242.34 247.52 185.59 238.85 237.09 226.96 250.25 301.08 225.45 238.18 231.22 251.39 258.82 186.87 152.07
17.7 15.61 13.5 15.02 23.66 22.17 17.78 12.77 19.29 18.15 19.08 19.87 22.59 20.4 22.41 24.45 19.98 14.44 15.39 12.5 16.1 14.23 13.75 18.83 16.73 17.91 17.84 20.66 16.09 14.15
18.75 19.37 19.81 20.18 20.81 22.2 21.73 22.35 20.35 17.94 20.66 21.9 21.0 20.58 20.81 21.24 20.96 15.9 19.27 19.96 19.72 21.89 23.44 21.64 20.15 21.05 20.42 19.85 19.44 17.94
3.0 3.24 2.47 1.85 3.06 2.64 2.21 2.63 2.12 2.73 1.85 2.12 1.82 3.37 2.15 2.56 2.12 2.68 1.43 1.32 1.77 1.84 2.78 2.19 1.94 1.91 2.31 2.5 2.8 2.42
87.98 56.78 98.59 120.86 74.09 114.2 141.19 116.43 129.45 96.27 110.98 101.13 72.95 23.86 167.21 152.23 141.54 14.2 103.86 91.39 99.92 96.04 53.09 82.67 93.03 101.85 96.07 64.32 95.36 99.08
9.65 9.69 10.19 10.23 12.01 11.03 12.35 11.32 10.29 10.34 10.17 10.39 12.15 8.57 12.8 11.22 12.26 6.07 9.5 9.15 10.05 11.14 12.24 11.16 9.95 10.3 10.6 10.29 11.47 10.73
11.57 11.61 11.21 10.14 13.36 12.48 11.44 13.67 11.06 10.56 10.34 10.45 10.38 13.46 12.57 11.98 11.82 11.4 9.66 10.38 10.54 9.88 12.24 10.2 9.59 10.48 11.02 9.92 9.48 10.98
16.71 16.29 15.69 14.09 19.66 16.1 14.3 11.6 14.54 14.59 15.85 13.7 14.92 14.9 17.74 18.86 19.47 15.33 12.59 13.25 14.59 13.55 9.25 16.56 14.61 16.16 14.94 14.88 13.46 13.94
1.53 1.86 1.46 1.15 1.7 2.78 3.08 2.28 1.71 1.7 1.51 1.6 1.9 2.45 2.44 2.32 1.8 1.15 1.48 1.85 1.56 1.8 1.1 2.14 1.87 1.98 1.52 1.59 2.16 2.11
3.56 3.64 2.99 2.27 4.39 6.87 5.67 5.93 4.45 3.32 2.75 4.04 5.44 5.13 5.22 5.81 4.53 2.27 3.42 3.51 3.5 3.72 3.31 5.9 3.65 4.16 3.39 2.79 4.33 4.22
60.49 42.37 58.76 61.1 64.14 73.35 77.7 81.2 52.02 35.48 50.73 38.42 47.33 96.06 81.93 62.28 50.71 62.54 34.88 30.51 33.21 43.42 53.55 38.68 42.44 33.11 46.73 35.91 54.11 50.43
128.47 126.77 92.0 114.98 134.86 122.81 152.27 133.49 116.83 129.35 137.67 145.55 184.89 69.54 194.77 175.69 175.63 45.02 139.86 141.75 159.35 156.37 138.36 177.68 142.9 172.97 160.56 113.11 139.13 125.51
43.51 43.55 37.94 30.48 33.59 24.37 35.74 39.16 40.68 41.56 48.94 51.71 68.24 17.03 65.28 59.22 50.37 14.89 37.78 48.94 51.76 50.13 39.18 49.68 44.77 51.65 60.43 40.12 38.7 40.9
8.5 8.77 10.75 12.08 11.76 15.91 12.7 12.91 14.81 11.66 12.23 12.23 12.03 9.67 16.49 16.6 16.64 4.43 12.03 11.93 12.65 12.05 4.48 10.56 10.39 11.62 11.42 10.1 9.91 13.89
27.65 27.92 28.8 28.05 23.24 26.92 31.5 27.38 27.33 23.39 26.5 26.4 25.15 21.1 32.99 30.25 30.24 11.46 24.63 25.36 24.76 27.59 36.34 26.73 27.13 26.05 26.05 25.18 24.29 18.53
8.23 8.87 8.01 7.63 8.21 10.37 11.08 8.71 8.63 9.54 9.66 10.49 10.91 5.89 10.1 10.5 11.06 5.76 8.65 8.82 9.68 9.09 9.72 10.02 9.65 10.31 10.29 8.68 9.53 9.31
56.2 52.7 56.36 44.04 56.13 56.47 67.33 64.1 56.07 49.16 51.64 57.89 42.61 17.23 57.96 52.46 54.8 30.8 58.74 63.81 60.32 60.49 74.2 53.26 55.98 52.52 51.47 62.94 52.84 36.88
10.38 9.92 10.88 11.29 14.41 10.57 8.6 8.91 11.19 9.79 9.74 9.79 9.12 7.78 12.84 12.38 13.35 8.39 7.7 7.86 8.57 8.63 12.7 10.41 9.48 8.77 9.04 10.16 10.85 7.72
11.75 10.4 11.95 11.86 12.23 15.38 16.89 20.14 14.24 12.47 14.31 14.72 16.14 15.15 17.29 13.96 15.07 8.14 12.59 13.94 11.86 12.7 15.03 11.91 11.58 11.13 12.19 13.16 14.25 13.76
16.59 16.47 16.57 16.78 18.83 18.24 18.71 16.85 18.42 16.75 19.13 19.45 20.65 11.7 22.1 22.0 20.54 9.43 16.05 15.54 16.7 17.35 16.66 16.59 17.07 15.85 17.79 16.8 17.65 17.09
12.89 12.01 19.95 26.65 13.89 21.71 20.88 14.97 23.33 17.2 22.32 19.84 26.26 5.04 29.64 28.91 28.34 14.37 21.69 19.9 21.41 21.01 16.63 19.66 21.0 18.92 19.31 14.39 13.45 22.61
44.56 47.9 48.49 48.38 34.0 50.69 53.9 48.4 39.99 35.92 42.75 43.78 41.46 37.24 57.96 57.91 55.67 17.69 38.54 39.12 44.23 44.24 40.48 46.41 42.25 44.07 43.7 39.87 33.81 35.95
9.73 10.14 10.38 10.67 11.7 13.66 12.65 8.53 12.26 11.59 12.37 12.6 9.8 4.13 12.14 12.3 12.61 5.36 11.13 9.75 12.25 12.75 11.82 11.68 11.81 12.55 12.02 9.94 10.86 12.04
118.95 120.31 120.22 143.44 94.41 110.33 118.15 126.76 104.49 95.48 113.29 117.3 116.47 106.43 136.5 136.42 131.06 60.62 108.12 99.58 114.26 119.49 127.8 114.58 114.17 120.03 120.86 107.96 108.54 95.55
Spov3_chr5.01053 (PP2-A13)
 1.54 2.08 1.74 1.77 5.51 5.26 2.91 1.66 2.51 2.7 1.9 2.82 2.45 1.89 5.24 4.98 3.62 0.76 1.79 1.66 2.19 2.61 3.89 3.22 1.72 2.35 2.31 3.64 2.74 2.53
13.56 12.83 11.55 11.03 16.41 16.29 15.12 15.0 11.86 12.54 12.22 13.11 11.98 12.75 15.35 15.69 14.67 10.0 10.55 11.69 12.08 12.24 12.6 14.24 13.48 14.0 12.09 13.98 14.18 12.99
1.3 1.59 1.09 1.05 1.12 1.37 1.08 1.05 0.92 1.13 1.12 0.98 1.14 1.76 1.1 1.36 1.13 0.85 0.83 0.86 0.89 1.08 0.72 0.9 0.89 0.83 1.0 1.19 1.42 1.52
0.25 0.28 0.21 0.3 0.6 0.28 0.24 0.35 0.21 0.07 0.04 0.29 0.04 0.04 0.18 0.27 0.32 0.15 0.0 0.03 0.08 0.03 0.44 0.03 0.03 0.13 0.31 0.28 0.39 0.22
58.86 62.39 57.65 55.59 42.19 62.91 67.19 68.49 51.37 45.63 55.37 56.76 49.57 46.42 73.5 75.21 74.41 26.6 51.5 52.53 56.79 56.82 46.3 54.44 53.87 59.48 56.84 49.6 48.38 69.02
16.09 12.27 13.0 3.82 32.11 110.58 81.19 59.31 38.02 37.74 33.39 45.66 26.05 65.68 64.41 61.5 36.64 24.57 28.64 34.15 32.34 33.89 16.52 46.09 37.24 41.72 40.15 46.27 43.63 47.12
7.43 5.49 6.58 6.92 2.77 6.4 8.07 9.38 6.32 4.87 7.37 6.99 3.6 3.89 8.09 8.28 8.45 2.42 6.29 6.83 6.24 6.66 3.08 5.81 6.23 6.41 6.36 6.56 8.06 9.07
59.84 57.58 61.43 70.71 66.05 66.98 68.6 77.75 68.2 60.25 63.88 62.43 58.38 63.65 71.49 73.56 79.34 32.45 58.74 55.84 58.81 57.99 90.65 68.3 63.13 56.98 58.7 60.82 64.59 52.06
113.73 93.76 127.61 132.92 149.78 186.09 178.13 151.89 135.46 100.24 145.36 154.44 123.77 126.68 170.57 153.78 149.99 77.44 115.56 130.4 111.61 129.39 184.54 141.94 114.72 116.17 100.3 141.46 139.16 145.25
0.88 1.09 0.86 0.69 1.18 1.3 1.19 0.97 0.91 0.98 1.0 1.02 0.97 1.09 1.13 1.17 1.1 0.73 0.74 0.78 0.85 0.89 0.78 1.08 0.99 0.99 0.88 0.84 0.99 0.98
377.84 375.42 365.1 362.37 312.59 323.58 357.52 377.01 330.09 303.73 326.15 339.06 355.75 366.88 396.52 341.43 351.13 185.03 305.87 309.79 318.45 335.84 505.33 349.84 340.98 318.91 325.04 384.31 328.98 273.25
6.23 6.02 5.66 5.7 5.82 4.89 5.46 5.73 5.22 4.63 5.28 5.35 5.6 4.92 5.63 5.34 6.06 4.52 4.83 4.54 5.3 5.59 7.18 5.35 5.2 5.43 5.68 6.22 5.46 5.04
8.37 8.29 8.47 8.61 9.92 9.59 9.65 8.33 9.28 8.65 8.95 10.16 9.22 9.09 11.33 9.7 10.47 7.1 8.11 8.2 8.04 8.69 10.79 8.54 7.56 9.09 7.69 8.24 8.8 10.0
5.15 4.67 4.25 4.16 5.16 6.26 5.03 5.41 4.89 4.54 4.42 4.93 5.41 5.37 5.32 5.28 5.64 3.54 4.22 3.76 4.51 4.36 4.25 5.22 4.86 4.58 5.14 5.24 5.05 4.71
31.43 29.37 27.65 28.16 31.79 36.6 38.19 42.73 30.37 27.12 36.4 30.38 32.59 49.32 44.14 39.03 32.93 36.78 23.38 22.84 22.62 22.28 41.2 21.2 20.63 22.82 29.88 34.7 30.15 25.83

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)