Heatmap: Cluster_184 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - 1.02 0.71 - - 0.81 0.88 0.95 1.19 2.23 - - 2.09 1.94 1.12 - - - - 0.67 - 0.99 - - - - - - -
0.21 -1.87 0.16 0.76 -1.27 -0.39 0.5 -2.5 0.78 0.93 0.29 0.18 0.57 0.82 -0.11 -0.58 -0.07 0.12 -0.56 -1.3 -0.94 0.58 -0.04 -0.37 -0.71 -0.55 0.61 0.1 -0.71 -0.38
Spov3_chr2.00641 (PROSCOOP2)
0.03 0.5 -0.17 -0.67 0.15 0.66 0.18 -0.89 0.01 0.5 0.25 0.06 0.21 -0.22 -0.15 0.9 0.41 -1.24 0.21 0.34 -0.69 0.56 -1.82 -1.17 -1.01 -0.12 -0.02 -0.08 -0.31 0.13
0.31 0.18 -0.15 -0.37 -0.04 0.2 -0.0 0.14 0.35 0.3 0.28 0.13 0.05 0.2 -0.03 0.38 0.12 -1.01 -0.09 -0.04 -0.06 0.1 -0.46 -0.19 -0.28 -0.23 0.09 -0.25 -0.16 -0.28
0.12 -0.1 -0.3 -0.44 0.1 -0.01 0.07 0.18 0.46 0.05 0.15 0.08 0.05 0.46 0.05 0.35 0.43 -0.21 -0.07 -0.34 -0.33 -0.03 -0.47 -0.45 -0.12 -0.22 0.46 -0.28 0.04 -0.55
-0.72 -0.37 -2.13 -0.87 0.25 -0.65 0.15 0.17 0.54 0.41 1.14 0.5 -0.09 0.16 0.99 0.45 0.06 -0.29 -0.97 -0.28 -0.42 -0.4 -0.63 0.25 0.42 -0.21 0.16 -0.06 -0.86 -0.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.