Heatmap: Cluster_91 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_28381.1 (ILP1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_0_7020.1 (CAS1)	-	-	-	-	-	1.73	-	-	-	-	-	-	-	-	-	-	-	4.36	-	-	-	-	1.92	-	-	-	-	-	-	-	1.77
Lsat_1_v5_gn_0_9440.1 (BTI1)	0.12	-	0.07	-1.53	-1.8	-	-	-1.9	-	-	-0.17	-0.93	0.45	-	-	-	-	4.13	0.16	0.41	-	1.35	-1.67	-1.91	-	-	-	-	-1.87	-1.88	0.62
Lsat_1_v5_gn_1_116560.1 (CPK27)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_29461.1 (AZG2)	-	-	-	-	-1.02	-1.19	-2.77	-0.99	-1.64	-	-0.28	-0.61	-2.7	-2.41	-2.59	-1.02	-1.19	4.14	-	-0.16	-	-1.25	1.63	-	-	-	-	0.99	-	-0.08	0.26
Lsat_1_v5_gn_1_32801.1 (HSD2)	-	-	-	-	-	-	-	-	-	-	-	-	0.38	-	-	-	-	4.74	-	-	-	-	-	-	-	-	-	-	-	-	1.61
Lsat_1_v5_gn_1_58041.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_60521.1 (RLP37)	-2.72	-	-	-	1.61	0.76	-3.08	-	-3.08	-3.32	-	-2.06	0.15	1.17	0.13	-3.06	-	4.22	-1.28	-2.43	-	-	-2.11	-3.3	-1.26	-	-	-3.2	-3.3	-3.28	-0.69
Lsat_1_v5_gn_1_62660.1 (MYB36)	1.86	-	-	-	0.66	0.88	-	-	-	-	-	-	-0.08	1.07	-	-	-	4.11	-	-	-	-	-	-	-	-	-	-	-	0.85	0.87
Lsat_1_v5_gn_1_88661.1 (HERK1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_90541.1 (PEX6)	2.71	-	-	-	-	-	-	-	-	2.57	-	-	-	-	-	-	-	4.21	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_114000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_17020.1 (scpl18)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.55	-	-	-	-	2.92	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_24941.1 (CYP706A7)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.68	-	-	-	-	2.42	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_49621.1 (ATB2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_66400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.65	-	-	-	-	-	-	-	-	-	-	-	-	2.56
Lsat_1_v5_gn_2_67041.1	-	-	-	-	-2.04	0.2	-	-0.55	-	-	-	-	-	1.04	-0.56	0.4	-	4.15	-1.39	0.05	-1.82	-	1.94	-1.78	-	-	-	-	-	-	0.35
Lsat_1_v5_gn_2_68380.1 (OPT9)	-	-	-	-	-	1.08	-	-	-	-	-	-	-	0.48	0.24	-	-	4.72	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_88541.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_100380.1 (MIF2)	-	-	-	-	-	-	-	-1.05	-	-	-	-	-	-	-	-	-	4.58	-	-	-	-	2.64	-	-	-1.41	-	-	-	-	-
Lsat_1_v5_gn_3_35841.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.63	-	-	-	-	2.64	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_36880.1 (MYB14)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.55	-	-	-	-	2.92	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_69481.1 (VETH2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.84	-	-	-	-	-	-	-	-	-	1.26	-	-	-
Lsat_1_v5_gn_3_75181.1 (TRX1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.65	-	-	-	-	2.54	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_98401.1 (LTI6b)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_155040.1 (CYP76C1)	-2.52	-2.79	-2.81	-4.41	-1.47	-1.25	-1.69	-1.32	-2.34	-3.54	-3.0	-4.39	-3.07	-3.63	-1.71	-1.74	-1.16	4.55	-1.69	-2.89	-1.91	-1.59	-6.8	-2.12	-1.74	-1.93	-2.51	-1.83	-0.5	-1.31	-1.28
Lsat_1_v5_gn_4_174101.1 (PERK6)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_56281.1	-5.51	-	-	-	-5.57	-4.12	-	-	-	-	-	-	-	-	-	-	-	4.75	-	-	-5.97	-	1.91	-	-2.92	-	-	-6.81	-5.9	-	-
Lsat_1_v5_gn_5_106361.1 (VTL5)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.62	-	-	-	-	-	-	-	-	-	-	-	-	2.7
Lsat_1_v5_gn_5_11101.1 (HAC1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_138801.1 (PP7)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.8	-	-	-	-	-	-	-	-	-	1.69	-	-	-
Lsat_1_v5_gn_5_152421.1 (ACBP5)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_158220.1 (BHLH100)	-	-	-	-	-	-	-	-	-	-	-	-	-0.5	-	-	-	-	4.78	-	-	-	-	-	-	0.74	-0.74	-	-	-	-	-0.79
Lsat_1_v5_gn_5_168280.1 (COPT3)	-	-	-	-	0.94	-	-	-	-	-	-	-	0.97	0.13	-	-	-	4.46	-	-	-	-	2.02	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_174001.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_182001.1 (LBD29)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_183501.1 (bZIP69)	-	-	-	-	-3.48	-1.72	-2.37	-	-	-	-	-	-1.74	-	-	-3.67	-	4.8	-	-	-	-	-	-	-	-	-	-	-	-	1.07
Lsat_1_v5_gn_6_54961.1	-	-	-	-	1.32	-	-	-	-	-	-	-3.2	-3.01	0.58	-0.26	-	-	4.26	-0.16	-	-2.09	-	-	-1.45	-	-1.74	-0.82	-0.67	-2.11	-0.44	1.5
Lsat_1_v5_gn_6_88820.1 (SMR9)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_6_90220.1 (AEP2)	-	-	0.57	-	-	-	-	-	-1.2	0.92	-	-0.35	-0.1	-	-	-1.12	-1.52	4.12	0.18	-1.55	-	-	-	-	-	-0.51	0.79	-0.31	-	-0.45	0.9
Lsat_1_v5_gn_7_37460.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_113341.1	1.85	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.53	-	-	-	-	-	-	-	-	-	2.08	-	-	-
Lsat_1_v5_gn_8_130280.1	-	-	1.41	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.79	-	-	-	-	-0.79	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_155761.1 (ET2)	2.61	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.47	4.46	-	-	-	-	-	-	-	-	-	-	-	-	0.62
Lsat_1_v5_gn_8_54860.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_81460.1	-1.63	-1.75	-1.71	-1.1	0.48	-0.48	-2.64	-2.16	-2.32	-2.69	-2.57	-1.63	0.5	1.07	0.51	-1.34	-1.34	3.59	-1.05	-2.0	-1.26	-1.29	1.05	-0.96	-1.35	-1.23	-1.08	-3.13	-1.25	-1.11	1.03
Lsat_1_v5_gn_8_97660.1 (GLR1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_9_110700.1 (SCL21)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.68	-	-	-	-	2.42	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_9_22041.1 (MYB48)	0.25	0.03	0.45	0.24	0.45	0.8	-0.14	-0.27	-0.9	-0.86	-0.44	-1.23	0.05	0.8	0.3	-0.56	-1.7	2.59	-0.5	-1.42	-0.77	-0.8	-0.43	-1.15	-0.91	-0.89	-0.64	-1.21	0.14	-0.44	-0.45
Lsat_1_v5_gn_9_40000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_9_87721.1 (PIS1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.73	-	-	-	-	2.17	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.