View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | Light: 268 uE m-2 s-1 | Light: 202.5 uE m-2 s-1 (Control) | Light: 135 uE m-2 s-1 | Light: 67.5 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L20D4 (Control) | Photoperiod: L12D12 | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C | Temperature: 25°C (Control) | Temperature: 30°C | Temperature: 35°C |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Lsat_1_v5_gn_1_112921.1 (ATARD2) | 156.44 | 150.32 | 134.67 | 114.2 | 192.58 | 184.31 | 118.17 | 115.22 | 102.23 | 101.98 | 100.07 | 91.71 | 97.12 | 162.42 | 150.81 | 98.54 | 93.66 | 369.43 | 136.11 | 104.64 | 117.17 | 125.97 | 323.52 | 113.13 | 110.2 | 107.8 | 116.32 | 110.77 | 129.57 | 117.95 | 120.9 |
Lsat_1_v5_gn_1_16460.1 (VHA-A2) | 8.11 | 10.38 | 8.92 | 6.69 | 15.35 | 8.81 | 5.84 | 4.62 | 6.5 | 7.33 | 7.08 | 8.58 | 10.16 | 18.59 | 14.27 | 9.02 | 9.74 | 34.82 | 8.99 | 7.21 | 6.73 | 7.35 | 35.04 | 7.19 | 7.43 | 7.67 | 8.12 | 8.32 | 9.4 | 8.86 | 10.76 |
8.17 | 5.55 | 5.01 | 6.34 | 18.89 | 14.5 | 3.55 | 3.43 | 4.0 | 2.71 | 4.37 | 2.77 | 3.54 | 19.42 | 15.36 | 6.09 | 3.74 | 29.52 | 6.65 | 2.96 | 3.51 | 3.95 | 35.73 | 3.16 | 3.31 | 4.35 | 4.57 | 3.46 | 5.81 | 4.47 | 4.87 | |
0.98 | 0.95 | 0.68 | 0.69 | 8.35 | 3.62 | 0.46 | 0.45 | 0.79 | 0.77 | 0.93 | 1.07 | 1.77 | 6.33 | 4.26 | 1.64 | 1.08 | 15.81 | 1.57 | 0.73 | 0.92 | 1.03 | 21.16 | 1.12 | 1.13 | 1.14 | 1.2 | 0.81 | 1.97 | 1.69 | 2.42 | |
Lsat_1_v5_gn_2_25861.1 (MYB46) | 9.99 | 11.11 | 8.95 | 8.47 | 30.9 | 18.3 | 10.37 | 12.42 | 10.73 | 9.96 | 12.04 | 11.73 | 12.38 | 36.4 | 30.48 | 13.36 | 9.57 | 49.41 | 12.98 | 10.07 | 9.66 | 10.59 | 56.99 | 9.97 | 10.76 | 9.96 | 11.45 | 9.32 | 13.16 | 13.63 | 11.75 |
Lsat_1_v5_gn_2_36200.1 (CYSA) | 116.82 | 119.63 | 113.06 | 96.31 | 153.64 | 132.46 | 59.3 | 54.05 | 55.53 | 56.49 | 50.58 | 50.16 | 93.64 | 119.35 | 116.89 | 66.77 | 58.55 | 310.67 | 140.58 | 72.67 | 63.8 | 58.8 | 361.23 | 73.68 | 70.44 | 59.62 | 71.88 | 55.78 | 89.68 | 93.4 | 104.98 |
5.49 | 8.52 | 5.61 | 5.92 | 10.25 | 8.3 | 3.76 | 4.23 | 5.04 | 4.97 | 4.97 | 5.08 | 7.08 | 10.35 | 9.07 | 5.05 | 4.47 | 24.1 | 5.12 | 3.81 | 4.55 | 5.29 | 23.52 | 4.63 | 4.56 | 5.07 | 6.06 | 4.51 | 6.7 | 6.48 | 10.98 | |
Lsat_1_v5_gn_2_84561.1 (PUB4) | 11.35 | 9.48 | 8.33 | 6.49 | 10.53 | 9.38 | 6.82 | 6.66 | 6.19 | 6.34 | 6.88 | 6.97 | 8.75 | 14.1 | 11.61 | 8.82 | 7.65 | 19.33 | 7.83 | 6.41 | 6.95 | 7.45 | 20.6 | 6.22 | 6.61 | 6.93 | 7.43 | 6.64 | 8.56 | 8.84 | 9.33 |
Lsat_1_v5_gn_3_125641.1 (EDE1) | 4.89 | 3.85 | 4.71 | 4.47 | 9.17 | 4.3 | 2.55 | 2.91 | 3.83 | 2.68 | 4.22 | 2.69 | 4.18 | 8.19 | 7.42 | 3.97 | 4.17 | 19.04 | 3.86 | 3.79 | 3.61 | 3.32 | 22.67 | 2.9 | 3.14 | 3.81 | 4.29 | 3.62 | 3.71 | 3.75 | 3.61 |
Lsat_1_v5_gn_3_126481.1 (ORP3C) | 16.36 | 23.15 | 17.95 | 14.26 | 41.72 | 31.11 | 14.45 | 15.03 | 12.36 | 11.52 | 14.38 | 12.78 | 15.51 | 38.12 | 32.73 | 17.91 | 12.85 | 79.97 | 16.4 | 10.87 | 12.09 | 12.84 | 67.42 | 12.42 | 11.99 | 12.43 | 15.14 | 10.47 | 21.9 | 20.23 | 20.7 |
Lsat_1_v5_gn_3_4321.1 (MEE54) | 6.11 | 6.32 | 5.5 | 5.81 | 17.54 | 11.93 | 4.29 | 3.45 | 5.58 | 5.33 | 6.28 | 5.22 | 7.38 | 10.19 | 10.28 | 6.95 | 5.39 | 29.92 | 6.11 | 5.18 | 5.81 | 5.8 | 37.37 | 4.69 | 5.13 | 5.67 | 6.18 | 6.39 | 8.08 | 6.94 | 5.87 |
Lsat_1_v5_gn_3_48740.1 (GAUT3) | 9.7 | 8.85 | 8.32 | 7.41 | 13.56 | 10.99 | 6.39 | 5.63 | 6.64 | 6.31 | 7.15 | 6.86 | 8.15 | 13.77 | 12.82 | 8.64 | 7.4 | 17.37 | 7.39 | 6.37 | 6.56 | 7.12 | 19.49 | 6.03 | 6.73 | 7.24 | 7.23 | 6.78 | 8.15 | 7.98 | 8.36 |
Lsat_1_v5_gn_3_53840.1 (RPK2) | 1.55 | 0.99 | 1.27 | 1.23 | 2.93 | 1.41 | 0.56 | 0.34 | 0.78 | 0.91 | 1.26 | 0.77 | 0.8 | 2.29 | 2.48 | 0.93 | 0.76 | 6.57 | 1.1 | 0.66 | 0.96 | 0.8 | 7.82 | 0.79 | 0.95 | 0.82 | 0.72 | 0.81 | 1.32 | 1.22 | 1.49 |
11.32 | 10.34 | 9.47 | 8.99 | 12.27 | 8.5 | 6.69 | 6.92 | 6.28 | 6.69 | 6.77 | 6.39 | 8.49 | 12.79 | 11.45 | 8.31 | 7.11 | 23.1 | 7.33 | 5.85 | 5.99 | 6.24 | 26.53 | 5.72 | 6.2 | 6.71 | 6.91 | 5.53 | 9.3 | 8.99 | 11.25 | |
3.16 | 3.77 | 2.82 | 2.31 | 11.98 | 7.44 | 2.67 | 2.09 | 2.51 | 3.69 | 4.81 | 3.54 | 4.59 | 9.26 | 10.31 | 4.03 | 2.05 | 25.87 | 3.65 | 2.44 | 2.46 | 2.74 | 33.67 | 2.86 | 2.07 | 2.5 | 4.27 | 2.45 | 5.17 | 4.31 | 5.87 | |
4.5 | 5.57 | 3.25 | 3.36 | 8.05 | 5.9 | 2.2 | 1.95 | 3.11 | 2.86 | 2.98 | 2.94 | 2.89 | 5.7 | 6.04 | 3.47 | 3.04 | 16.45 | 3.34 | 2.63 | 3.26 | 3.21 | 13.02 | 3.0 | 2.77 | 2.78 | 3.11 | 2.47 | 4.37 | 4.17 | 4.97 | |
Lsat_1_v5_gn_4_120460.1 (ENY) | 15.07 | 24.4 | 13.6 | 10.78 | 19.01 | 10.81 | 7.08 | 6.29 | 8.29 | 8.34 | 9.23 | 8.08 | 10.06 | 30.61 | 25.43 | 8.89 | 7.72 | 41.53 | 11.4 | 7.46 | 7.5 | 8.21 | 55.26 | 6.46 | 6.9 | 8.0 | 7.16 | 6.1 | 12.08 | 9.78 | 12.59 |
Lsat_1_v5_gn_4_146261.1 (ARO2) | 13.11 | 9.22 | 9.64 | 9.56 | 22.7 | 13.68 | 8.17 | 7.04 | 8.59 | 7.69 | 9.39 | 7.39 | 8.52 | 20.62 | 19.54 | 10.61 | 8.29 | 29.81 | 11.17 | 8.17 | 8.9 | 9.74 | 30.12 | 6.97 | 8.73 | 9.16 | 9.17 | 10.22 | 11.58 | 10.85 | 9.28 |
Lsat_1_v5_gn_4_158640.1 (HAT9) | 11.75 | 16.11 | 7.98 | 5.41 | 21.43 | 21.94 | 11.05 | 7.25 | 7.36 | 4.89 | 6.34 | 4.56 | 6.98 | 23.74 | 19.51 | 9.99 | 8.33 | 59.93 | 9.73 | 6.32 | 6.87 | 7.68 | 53.0 | 7.04 | 8.47 | 8.99 | 8.45 | 5.83 | 12.28 | 9.11 | 12.14 |
Lsat_1_v5_gn_4_162241.1 (PUB4) | 8.45 | 8.18 | 8.16 | 6.14 | 10.15 | 11.0 | 6.19 | 6.34 | 5.55 | 4.68 | 5.3 | 5.07 | 7.81 | 12.04 | 9.79 | 7.69 | 6.46 | 19.49 | 6.7 | 5.24 | 5.45 | 5.62 | 21.18 | 6.28 | 5.73 | 6.34 | 6.07 | 4.58 | 7.3 | 8.47 | 9.04 |
Lsat_1_v5_gn_4_38941.1 (CML25) | 0.78 | 0.87 | 0.19 | 0.37 | 2.71 | 1.38 | 0.65 | 0.45 | 0.65 | 0.5 | 0.77 | 0.6 | 0.55 | 1.44 | 1.58 | 0.7 | 0.45 | 8.16 | 1.51 | 0.93 | 0.33 | 0.65 | 8.7 | 0.38 | 0.66 | 0.46 | 0.72 | 0.55 | 0.87 | 0.99 | 1.14 |
Lsat_1_v5_gn_4_4460.1 (ARO4) | 1.45 | 2.16 | 1.37 | 1.09 | 3.59 | 2.77 | 0.86 | 0.75 | 1.33 | 0.97 | 1.17 | 1.15 | 1.41 | 3.82 | 3.48 | 1.54 | 1.12 | 8.31 | 1.76 | 1.08 | 1.32 | 1.25 | 9.83 | 1.05 | 1.0 | 1.44 | 1.07 | 1.1 | 1.57 | 1.38 | 1.89 |
Lsat_1_v5_gn_5_159601.1 (CEN2) | 23.59 | 21.05 | 21.86 | 20.27 | 31.89 | 29.98 | 18.47 | 18.99 | 18.15 | 18.48 | 20.31 | 17.83 | 26.23 | 37.28 | 29.76 | 19.77 | 19.05 | 42.85 | 21.79 | 18.21 | 19.19 | 19.4 | 46.7 | 18.76 | 18.47 | 20.54 | 20.86 | 17.74 | 23.94 | 22.34 | 26.92 |
7.05 | 7.86 | 7.4 | 6.09 | 14.51 | 7.69 | 3.07 | 2.44 | 5.76 | 6.06 | 6.74 | 5.62 | 5.93 | 9.74 | 10.03 | 6.95 | 6.57 | 28.39 | 5.97 | 5.24 | 5.14 | 5.32 | 27.38 | 4.48 | 5.15 | 5.43 | 6.57 | 4.58 | 7.26 | 7.49 | 7.87 | |
Lsat_1_v5_gn_5_5001.1 (CEO) | 58.03 | 61.4 | 62.51 | 64.95 | 91.59 | 76.53 | 46.33 | 49.42 | 48.32 | 48.4 | 51.39 | 47.35 | 63.69 | 100.85 | 86.56 | 58.49 | 50.83 | 127.69 | 51.0 | 43.48 | 43.7 | 48.87 | 145.28 | 42.67 | 44.81 | 47.86 | 50.84 | 46.11 | 56.81 | 56.62 | 64.6 |
Lsat_1_v5_gn_5_70900.1 (FIS1A) | 18.85 | 16.69 | 17.54 | 16.99 | 37.21 | 34.01 | 16.88 | 17.01 | 17.32 | 16.83 | 17.72 | 18.83 | 23.61 | 32.73 | 27.89 | 18.93 | 17.3 | 90.68 | 17.87 | 16.82 | 16.81 | 17.14 | 65.12 | 16.89 | 20.32 | 18.49 | 18.49 | 20.78 | 23.53 | 22.71 | 24.89 |
10.14 | 10.54 | 13.78 | 12.63 | 24.93 | 18.48 | 9.54 | 8.47 | 7.05 | 6.81 | 9.4 | 7.76 | 12.38 | 31.38 | 24.46 | 11.43 | 7.22 | 65.92 | 11.05 | 7.08 | 6.61 | 8.15 | 44.97 | 8.01 | 8.25 | 8.74 | 8.93 | 9.9 | 10.01 | 9.39 | 9.39 | |
Lsat_1_v5_gn_6_3701.1 (CEO) | 85.61 | 84.74 | 91.79 | 88.41 | 132.21 | 111.52 | 68.85 | 70.43 | 62.14 | 63.26 | 68.65 | 63.51 | 80.05 | 132.63 | 115.13 | 71.65 | 65.83 | 203.97 | 72.65 | 61.27 | 61.87 | 66.8 | 184.76 | 59.81 | 62.35 | 63.56 | 70.97 | 68.06 | 82.99 | 77.83 | 85.73 |
15.97 | 16.29 | 9.22 | 4.9 | 32.14 | 26.43 | 10.54 | 10.98 | 10.26 | 7.22 | 9.35 | 8.59 | 18.03 | 32.47 | 30.92 | 18.85 | 11.18 | 51.74 | 15.27 | 8.64 | 9.9 | 9.85 | 58.59 | 8.75 | 9.02 | 13.99 | 8.9 | 9.1 | 11.18 | 11.87 | 12.2 | |
Lsat_1_v5_gn_6_6221.1 (GST10) | 14.19 | 12.66 | 17.19 | 17.86 | 25.58 | 24.65 | 13.89 | 12.96 | 14.44 | 15.67 | 14.87 | 13.38 | 18.13 | 25.55 | 24.63 | 15.35 | 14.5 | 55.21 | 17.07 | 14.99 | 14.16 | 15.98 | 42.43 | 15.22 | 16.78 | 15.0 | 14.9 | 16.72 | 17.85 | 17.03 | 15.78 |
Lsat_1_v5_gn_6_81701.1 (7TM4) | 12.25 | 15.06 | 14.21 | 11.14 | 15.53 | 14.33 | 9.02 | 8.37 | 10.15 | 11.21 | 11.42 | 10.23 | 15.34 | 19.91 | 15.51 | 14.19 | 14.4 | 34.03 | 14.4 | 11.09 | 10.29 | 12.89 | 40.88 | 10.85 | 11.16 | 11.57 | 12.53 | 11.21 | 14.24 | 16.02 | 19.92 |
Lsat_1_v5_gn_7_4740.1 (SPPL4) | 8.82 | 10.26 | 10.83 | 7.92 | 14.34 | 11.03 | 4.41 | 4.28 | 4.91 | 4.74 | 5.78 | 5.05 | 6.7 | 23.56 | 16.93 | 6.35 | 5.73 | 34.56 | 6.91 | 4.1 | 4.88 | 4.92 | 37.97 | 4.22 | 4.45 | 5.22 | 5.49 | 4.34 | 8.18 | 7.14 | 9.14 |
14.1 | 10.32 | 12.81 | 7.51 | 18.23 | 12.67 | 4.44 | 3.57 | 5.91 | 6.1 | 6.78 | 6.1 | 7.71 | 15.41 | 13.9 | 7.93 | 5.85 | 37.13 | 7.83 | 5.42 | 6.7 | 6.73 | 36.17 | 5.36 | 6.35 | 6.48 | 7.68 | 5.41 | 8.96 | 8.71 | 9.55 | |
Lsat_1_v5_gn_8_153841.1 (PANK1) | 7.7 | 8.43 | 8.27 | 8.63 | 13.33 | 14.27 | 7.56 | 6.54 | 7.15 | 7.49 | 8.64 | 6.99 | 8.55 | 14.74 | 11.77 | 8.63 | 7.06 | 18.97 | 9.11 | 6.82 | 7.29 | 7.61 | 22.88 | 7.38 | 7.62 | 8.16 | 7.47 | 7.08 | 9.0 | 8.88 | 9.05 |
Lsat_1_v5_gn_8_20761.1 (ARA6) | 88.1 | 94.63 | 86.41 | 101.77 | 162.12 | 151.9 | 87.86 | 96.15 | 82.9 | 93.43 | 95.12 | 83.21 | 108.23 | 171.9 | 142.6 | 107.77 | 88.07 | 227.29 | 79.24 | 77.85 | 87.22 | 99.02 | 237.66 | 79.85 | 83.98 | 94.23 | 97.78 | 86.62 | 120.74 | 112.12 | 107.59 |
Lsat_1_v5_gn_8_29221.1 (SEC14) | 11.56 | 15.67 | 9.25 | 9.0 | 17.92 | 25.38 | 8.79 | 10.06 | 4.19 | 3.0 | 5.33 | 2.77 | 5.61 | 18.69 | 15.4 | 7.97 | 4.8 | 45.87 | 9.78 | 4.35 | 5.62 | 6.9 | 40.75 | 5.52 | 5.84 | 7.17 | 5.84 | 5.19 | 9.14 | 7.17 | 7.05 |
Lsat_1_v5_gn_8_33860.1 (PUX7) | 14.11 | 15.89 | 14.25 | 16.92 | 22.13 | 18.96 | 12.26 | 12.49 | 12.41 | 12.04 | 14.39 | 12.6 | 14.77 | 26.77 | 21.11 | 13.62 | 11.19 | 38.51 | 13.66 | 11.06 | 12.19 | 12.46 | 37.14 | 10.74 | 12.79 | 12.88 | 13.42 | 12.09 | 16.94 | 15.3 | 17.16 |
Lsat_1_v5_gn_8_41841.1 (PSS1) | 3.47 | 2.27 | 2.78 | 1.99 | 3.14 | 3.28 | 1.23 | 1.19 | 1.33 | 1.18 | 1.79 | 1.39 | 1.25 | 3.01 | 2.15 | 1.45 | 1.24 | 8.98 | 1.63 | 1.08 | 1.3 | 1.64 | 6.89 | 1.33 | 1.41 | 1.48 | 1.53 | 1.2 | 1.98 | 1.71 | 1.33 |
Lsat_1_v5_gn_8_52920.1 (SBH2) | 45.04 | 54.63 | 43.02 | 33.64 | 82.87 | 53.4 | 30.69 | 34.18 | 26.75 | 26.69 | 30.39 | 26.69 | 34.06 | 72.23 | 54.57 | 35.68 | 29.01 | 155.37 | 35.41 | 26.35 | 26.56 | 28.59 | 163.08 | 22.22 | 26.94 | 31.01 | 30.46 | 25.16 | 36.61 | 32.92 | 27.94 |
Lsat_1_v5_gn_8_67661.1 (AR2) | 78.57 | 83.32 | 76.69 | 78.38 | 147.09 | 133.14 | 71.72 | 74.63 | 59.07 | 61.68 | 66.09 | 55.05 | 93.9 | 155.21 | 126.15 | 92.29 | 73.79 | 213.29 | 73.01 | 55.98 | 60.0 | 62.58 | 248.46 | 54.23 | 61.33 | 66.64 | 65.98 | 70.77 | 84.69 | 72.62 | 77.47 |
1.52 | 1.23 | 1.23 | 1.37 | 6.0 | 3.39 | 0.78 | 0.72 | 1.33 | 1.63 | 1.94 | 1.84 | 1.76 | 8.14 | 4.9 | 2.08 | 1.49 | 10.87 | 2.13 | 1.57 | 2.08 | 1.73 | 11.69 | 1.53 | 1.74 | 1.43 | 1.91 | 1.55 | 3.71 | 3.15 | 2.01 | |
Lsat_1_v5_gn_9_115681.1 (BCA5) | 34.34 | 34.35 | 41.45 | 40.75 | 97.6 | 69.61 | 19.37 | 23.35 | 26.25 | 28.92 | 32.68 | 29.75 | 46.44 | 115.0 | 80.86 | 37.23 | 27.51 | 158.43 | 36.67 | 25.63 | 27.45 | 29.59 | 135.91 | 29.78 | 27.72 | 27.73 | 28.64 | 29.86 | 43.71 | 35.88 | 39.33 |
2.23 | 3.52 | 2.26 | 2.04 | 5.94 | 5.04 | 1.86 | 1.73 | 2.0 | 2.51 | 1.83 | 1.53 | 2.74 | 4.6 | 4.56 | 2.76 | 1.91 | 9.71 | 2.81 | 1.96 | 1.86 | 1.93 | 14.48 | 1.81 | 1.88 | 2.18 | 2.03 | 1.9 | 2.8 | 3.07 | 3.83 | |
19.49 | 21.62 | 20.32 | 24.6 | 52.97 | 50.04 | 18.97 | 15.15 | 20.24 | 19.36 | 23.07 | 15.88 | 20.02 | 59.77 | 44.98 | 28.03 | 17.8 | 77.74 | 35.02 | 18.66 | 18.82 | 20.16 | 93.09 | 17.59 | 17.77 | 20.96 | 22.68 | 17.37 | 30.51 | 23.95 | 21.79 | |
Lsat_1_v5_gn_9_73540.1 (ATL52) | 0.47 | 0.19 | 0.2 | 0.17 | 3.09 | 2.37 | 0.25 | 0.18 | 0.46 | 0.29 | 0.59 | 0.25 | 0.69 | 2.48 | 1.71 | 0.62 | 0.64 | 7.58 | 0.48 | 0.26 | 0.45 | 0.68 | 9.02 | 0.47 | 0.5 | 0.4 | 0.61 | 0.51 | 0.61 | 0.74 | 0.69 |
Lsat_1_v5_gn_9_87820.1 (SRP3) | 139.33 | 161.43 | 132.61 | 122.64 | 349.46 | 311.14 | 160.78 | 151.82 | 149.5 | 155.21 | 146.07 | 129.56 | 182.35 | 403.47 | 360.0 | 244.75 | 185.89 | 671.61 | 239.46 | 173.38 | 186.06 | 181.74 | 696.09 | 147.53 | 172.63 | 172.64 | 193.81 | 158.92 | 254.29 | 210.14 | 150.75 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)