Heatmap: Cluster_239 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.15 -1.6 -1.94 -2.21 -0.5 0.01 -0.15 -0.12 -1.21 -1.64 -1.07 -1.27 0.27 1.12 0.7 -0.41 -0.39 1.73 -0.28 -0.6 -0.75 -0.72 2.9 -0.82 -0.88 -0.61 -0.64 -0.65 -1.02 -0.88 -1.05
-2.43 -3.68 -2.19 -2.61 0.67 0.17 -1.53 -1.71 -1.41 -1.08 -1.2 -0.81 -0.33 0.73 0.6 -0.47 -1.55 2.17 -1.2 -1.77 -1.26 -0.84 3.03 -2.2 -1.66 -0.92 -0.7 -1.94 -1.11 -0.65 1.41
- - - - -1.86 - - - - - -2.58 - 0.84 0.74 -0.15 - -1.01 3.06 - -2.78 - - 3.84 - - -2.77 -0.58 - -2.6 - 0.91
-2.67 -3.33 -2.84 -3.62 -0.37 -0.34 -1.89 -1.64 -2.83 -4.61 -2.22 -2.87 -0.03 0.67 -0.26 -2.02 -2.35 2.79 -1.16 -3.37 -2.4 -3.06 3.72 -1.53 -2.46 -3.18 -2.46 -3.27 -0.85 -1.0 0.05
- -3.05 -1.24 -3.39 -0.97 -2.13 -2.78 -3.32 -1.81 -2.05 -1.38 -2.4 0.79 0.97 -0.48 -1.92 -1.0 2.81 -1.69 -2.55 -2.84 -2.48 3.28 -1.83 -1.42 -0.89 -2.6 -2.26 -1.08 -0.78 1.57
-1.88 -1.2 -1.75 -1.62 -1.27 -0.81 -0.05 0.08 -1.09 -0.88 -1.04 -0.67 0.04 -0.41 -0.08 -0.15 -0.12 1.49 -0.57 -0.69 -1.03 -1.13 3.18 -0.89 -0.6 -0.8 -0.91 -1.3 -0.52 0.13 0.42
-1.24 -0.88 -0.69 -0.8 -0.81 -0.82 -0.21 -0.28 -0.72 -0.56 -0.6 -0.37 0.18 -0.49 -0.1 -0.24 -0.06 1.5 -0.7 -0.4 -0.66 -0.79 2.71 -0.67 -0.33 -0.62 -0.7 -1.0 -0.39 0.3 0.63
-1.17 -0.95 -0.89 -0.64 -0.05 -0.28 -0.63 -0.31 -0.42 -0.26 -0.4 -0.3 0.54 0.15 -0.04 -0.4 -0.35 1.41 -1.24 -0.67 -0.55 -0.81 2.73 -0.71 -0.74 -0.76 -0.67 -0.72 -0.09 -0.17 -0.11
-1.53 -0.87 -1.51 -1.61 0.24 0.35 -0.36 -0.43 -0.71 -1.22 -0.66 -1.06 -0.93 1.57 0.52 -0.7 -0.82 1.51 -0.4 -1.1 -0.65 -1.04 2.99 -1.0 -1.45 -0.95 -0.6 -1.39 -0.95 -1.01 -0.73
-1.73 -2.45 -2.59 -1.26 -0.21 -1.77 -2.34 -2.75 -0.88 -2.09 -0.63 -1.04 -0.76 0.93 0.29 -1.71 -1.83 2.59 -1.59 -2.07 -0.96 -1.36 3.18 -1.59 -0.8 -1.19 -1.55 -1.66 -0.3 -0.41 1.06
-1.27 -1.93 -1.42 -1.27 0.77 0.19 -2.15 -2.39 -2.02 -3.44 -1.56 -2.55 -0.1 2.15 0.86 -1.67 -2.24 1.97 -1.03 -2.82 -1.73 -1.88 3.25 -2.1 -1.65 -1.66 -1.15 -2.84 -0.66 -1.28 -0.9
-3.6 -2.83 - -3.97 -1.28 -1.53 -0.99 -0.53 -2.88 -3.19 -2.44 -3.78 -0.32 1.33 -0.09 -1.77 -1.99 2.57 -1.51 -2.36 -1.99 -1.76 3.79 -1.67 -1.54 -2.4 -2.6 -0.91 -1.67 -2.06 -0.97
-0.76 -0.79 -0.82 -1.0 -0.31 -0.33 -0.79 -0.46 -1.13 -0.96 -0.83 -0.66 0.55 0.34 0.41 -0.55 -0.49 1.56 -0.65 -0.63 -0.96 -0.6 2.64 -0.52 -0.22 -0.95 -0.82 -0.42 -0.22 -0.05 0.47
- - - - -4.23 -1.67 - - - - - - -1.06 -0.41 -0.63 - -3.97 2.95 -4.04 - - - 4.37 - - - - - - - -2.43
-1.22 -1.07 -2.46 -3.1 -0.3 0.14 -0.43 -0.26 -1.43 -1.53 -1.37 -1.66 -0.61 1.78 1.25 -0.51 -0.63 1.21 -0.05 -1.01 -0.85 -0.81 2.99 -0.87 -0.97 -0.94 -0.9 -0.56 -0.78 -1.04 -1.43
-3.56 - - - -2.49 -2.97 -6.13 -4.35 - -5.62 -5.53 -6.73 0.71 -1.01 -2.39 -4.78 -5.09 3.35 -4.43 -6.74 -5.07 - 4.14 -4.05 -4.03 - -6.34 -4.54 - -6.32 -6.08
-1.09 -1.09 -1.71 -1.47 -0.19 0.09 -0.65 -0.73 -1.0 -1.06 -0.81 -0.74 -0.02 1.52 0.85 -0.5 -0.73 1.11 0.13 -1.0 -0.67 -0.62 2.64 -0.59 -0.52 -0.68 -0.66 -0.87 -0.12 -0.4 -0.01
- - -5.84 - -5.18 -4.43 -4.82 -6.15 -5.1 -4.78 -3.03 -7.28 -2.86 -6.36 -4.02 -4.89 -5.96 3.17 -4.29 -3.97 -4.39 -7.97 4.37 -4.33 -6.17 -4.32 -5.66 -6.54 -3.64 -2.65 -2.52
-1.81 -1.5 -1.59 -0.99 0.06 0.12 -0.97 -0.91 -0.77 -0.71 -0.59 -0.86 0.25 0.14 0.02 -0.53 -0.76 1.8 -0.73 -1.06 -0.79 -0.74 3.08 -0.98 -0.87 -0.84 -0.77 -1.08 -0.55 -0.3 -0.01
-1.8 -1.57 -1.29 -1.87 -1.15 -0.94 -1.95 -2.33 -1.21 -1.07 -1.29 -1.08 -0.61 -0.23 -1.16 -1.25 -1.15 2.37 -1.31 -1.64 -1.83 -1.83 3.59 -1.0 -1.58 -1.17 -1.13 -2.38 -0.55 0.01 0.59
-1.43 - -2.3 -4.3 -0.32 -3.01 -2.01 -4.4 -1.89 -2.28 - -0.74 -1.96 - - -2.72 - 2.34 -0.52 - -0.61 -1.39 4.01 -0.15 -3.07 -2.45 -1.22 -2.09 -1.86 -1.67 1.23
-1.76 -2.62 -1.86 -1.03 -1.07 0.27 -2.66 -2.34 -1.56 -1.77 -0.99 -2.11 0.31 0.1 -1.79 -1.52 -1.25 2.53 -2.44 -1.54 -1.7 -2.73 3.67 -1.18 -1.11 -3.11 -2.39 -0.91 -2.28 -1.24 0.24
-4.23 -2.83 -1.82 -1.97 -0.97 -0.78 -1.48 -1.47 -0.98 -0.96 -0.4 -0.88 -0.06 0.43 -0.01 -0.74 -0.82 2.47 -1.64 -0.42 -0.44 -0.74 3.04 -0.82 -0.8 -0.59 -0.93 -0.88 -0.49 -0.32 0.15
-3.08 -1.59 - -0.78 -1.19 -1.95 -2.39 -3.09 -2.44 -2.91 -0.4 -3.23 0.87 - -3.97 -2.59 -1.84 2.76 -2.79 -2.74 -1.61 -2.68 3.84 -1.14 -1.21 -1.02 -2.0 -1.38 -1.51 -1.19 -0.46
- - - - - - - - - - - - -1.28 0.7 - - -1.35 3.17 - - - - 4.29 - - - - - - - -
- - - - 0.44 -2.26 -6.09 - -3.09 -2.51 -1.95 -3.57 -0.29 1.18 0.27 -5.95 -3.82 3.04 -3.73 -4.05 -4.56 -4.13 3.92 -4.37 -6.3 - -3.42 -5.58 -7.13 -6.3 -0.59
-1.66 -4.22 -2.49 -1.83 -0.33 -0.07 -1.12 -1.34 -1.11 -0.88 -0.18 -0.57 0.16 0.28 0.14 -1.07 -1.56 2.3 -1.4 -0.51 -1.2 -2.03 3.15 -0.72 -1.39 -1.83 -0.8 -0.6 -1.01 -0.83 0.73
-1.25 -1.25 -1.39 -1.47 -0.24 0.16 -0.64 -0.73 -1.69 -2.07 -1.04 -1.58 -1.2 1.68 0.5 -0.82 -1.15 1.77 -0.61 -1.34 -0.84 -0.44 3.09 -1.21 -1.51 -1.7 -0.72 -1.82 -0.25 -0.34 -0.25
-1.28 -1.88 -1.94 -1.81 -0.03 -0.04 -1.1 -1.21 -1.91 -1.81 -1.62 -1.8 -0.75 1.73 0.96 -0.99 -1.23 1.85 -0.21 -1.48 -1.19 -1.12 3.26 -1.18 -1.29 -1.5 -1.36 -1.08 -0.72 -1.33 -0.78
-1.33 -1.18 -2.01 -1.61 0.01 -0.07 -1.04 -1.3 -0.58 -0.84 -0.7 -0.69 -0.15 0.45 0.53 -0.04 -0.41 2.0 -0.29 -0.26 -0.61 -0.57 2.84 -1.12 -0.94 -0.53 -0.59 -1.28 -0.92 -1.06 -0.12
-2.89 -2.35 -0.92 -1.91 -1.68 -0.78 -1.28 -2.27 -2.04 -3.31 -2.21 -1.07 -1.51 0.39 0.1 -1.1 -0.95 2.81 - -3.45 - -2.49 3.84 - -1.42 -0.8 -4.44 -3.19 -1.86 -3.17 -0.9
-1.6 -0.61 -1.59 -0.51 0.24 -0.39 -0.71 -0.62 -0.38 -0.49 -0.31 -0.48 -0.4 0.09 0.17 -0.64 -0.66 2.03 -0.32 -0.39 -0.53 -0.64 2.44 -0.65 -0.76 -0.67 -0.85 -1.16 -0.26 -0.2 0.65
-4.87 - - - -1.89 -1.66 -1.92 -5.05 -2.87 -1.53 -1.76 -2.21 -2.22 - - -5.04 -1.64 2.71 -2.37 -2.1 -1.85 -4.98 4.3 -3.74 -4.23 -1.23 -3.49 -1.56 -5.14 -3.65 -1.36
-1.32 -1.4 -2.46 -1.6 -0.18 -0.79 -3.2 -2.1 -1.59 -1.93 -1.76 -1.67 -0.27 0.9 -0.32 -1.55 -1.55 2.35 -0.85 -1.34 -1.81 -0.51 3.19 -2.39 -1.11 -1.38 -1.92 -1.56 0.06 0.61 1.08
-1.9 -1.56 -1.27 -2.09 -0.36 -0.32 -2.27 -1.93 -0.81 -1.26 -0.97 -0.8 0.88 0.07 0.02 -0.75 -0.89 2.22 -0.77 -1.22 -1.23 -1.55 2.97 -0.65 -0.18 -1.14 -0.74 -0.92 -0.93 -0.26 0.88
-4.11 -3.54 -6.18 -4.39 -0.46 -1.05 -3.07 -5.15 -3.76 -4.17 -4.28 -4.31 0.44 0.47 -1.28 -4.21 -4.48 2.72 -2.64 -5.34 -2.3 -4.59 4.01 -2.52 -1.94 -3.45 -3.51 -3.7 -3.39 -0.95 0.64
-1.79 -1.15 -1.14 -1.11 -0.12 0.36 0.26 -0.05 -0.7 -0.97 -1.12 -1.38 -0.65 1.17 0.53 -0.1 -0.31 1.19 -0.4 -0.71 -0.64 -0.43 2.55 -0.45 -0.35 -0.42 -0.28 -0.68 -0.38 -0.65 -0.14
-4.68 -7.27 -7.26 - -2.79 -2.72 -9.76 -8.04 -5.42 -7.27 -4.44 -6.26 -1.92 -2.18 -4.28 -7.89 -6.6 3.43 -2.58 -8.0 -4.67 -4.11 4.22 -2.94 -2.88 -5.04 -4.79 -5.51 -10.18 -8.24 -4.89
-1.27 -1.78 -1.4 -1.02 -0.06 -0.21 -0.65 -0.89 -1.23 -0.94 -1.07 -0.91 0.6 0.47 -0.0 -0.4 -0.32 1.96 -0.92 -1.01 -0.75 -1.11 2.83 -1.0 -0.66 -0.95 -0.93 -0.85 -0.71 -0.39 0.85
-2.41 -2.53 -3.53 -2.16 0.13 -0.15 -1.31 -1.43 -1.23 -0.93 -0.72 -1.69 -1.09 0.27 -0.05 -0.86 -1.54 2.36 -0.8 -1.34 -0.93 -0.65 3.32 -1.47 -0.85 -1.62 -0.68 -2.53 -0.07 -0.27 0.15
-0.57 -0.84 -2.87 -1.42 -0.66 -3.75 -1.67 0.29 -1.45 0.13 -1.48 -2.17 0.25 0.24 0.08 -1.53 -1.73 2.75 -1.79 -0.91 -2.27 -2.42 3.41 -0.74 -1.96 -2.1 -2.06 -3.07 -3.15 -1.38 -1.48
-3.81 -2.21 -2.46 -2.44 0.18 -0.33 -1.15 -1.24 -0.83 -1.0 -0.69 -0.74 -0.22 1.3 0.49 -0.88 -0.73 2.0 -0.5 -1.23 -1.11 -0.88 3.15 -1.42 -1.11 -0.79 -0.6 -1.59 -0.48 -1.06 -0.4
-1.41 -3.04 -3.85 -2.6 -1.62 -0.79 -0.7 -0.86 -2.51 -2.55 -1.24 -4.0 -0.28 0.72 -0.01 -0.98 -0.75 2.21 -0.05 -3.47 -1.94 -2.09 3.56 -1.46 -0.96 -1.13 -1.92 -1.86 -1.28 -0.57 0.89
- -5.88 -5.79 -5.87 -2.42 -3.04 -2.87 -3.5 -4.77 -3.88 -3.12 -3.55 -2.68 -0.91 -0.65 -5.76 -5.36 3.25 - -3.77 -4.05 - 4.2 -1.96 - -5.26 -2.5 -5.29 -3.02 -3.43 -4.08
-1.27 -2.09 -3.25 -2.59 -0.76 0.27 -1.38 -1.62 -1.53 -1.13 -1.37 -1.09 0.87 0.79 0.31 -0.66 -0.9 2.12 -2.21 -2.12 -2.29 -1.24 3.16 -1.41 -1.01 -0.85 -0.98 -1.73 -0.59 -0.33 0.91
- - - - - - - - - - - - - - - - - 3.36 - -1.77 - - 4.31 - -2.7 - -2.86 - - -2.71 -2.22
-3.81 -4.52 -4.47 -4.4 -1.81 -1.87 -1.67 -2.27 -1.2 -1.27 -1.14 -1.13 -0.49 -1.55 -1.01 -1.18 -1.09 2.72 -1.43 -0.99 -1.07 -1.39 3.87 -1.32 -1.13 -1.11 -1.0 -1.75 -2.69 -2.69 -2.63
-1.04 -1.64 -1.56 -1.79 -0.11 -0.16 -0.67 -0.64 -0.59 -0.52 -0.3 -0.17 -0.39 0.78 0.7 -0.22 -0.04 1.37 -0.14 -0.7 -0.5 -0.63 2.62 -0.73 -0.42 -0.83 -0.33 -0.37 -0.53 -0.38 -0.12
-3.38 -3.02 -2.66 -2.14 -0.32 -0.45 -1.79 -2.46 -0.95 -1.1 -1.11 -0.61 -0.73 -0.9 -0.38 -0.96 -0.99 2.35 -1.21 -1.25 -0.87 -1.16 3.57 -1.47 -1.24 -1.43 -0.94 -2.0 -0.19 -0.34 -0.16
-1.17 -1.6 -1.01 -0.9 0.02 0.02 -1.0 -1.09 -0.73 -1.1 -0.97 -0.78 0.66 0.37 -0.01 -0.49 -0.51 1.7 -0.47 -0.51 -0.99 -0.85 2.72 -0.37 -0.53 -0.83 -0.51 -0.86 -0.22 -0.03 0.4
-0.78 -1.34 -0.98 -1.05 -0.02 -0.33 -1.19 -1.19 -0.55 -0.85 -0.84 -0.75 0.32 0.21 -0.1 -0.83 -0.54 1.8 -0.25 -0.8 -0.88 -0.85 2.97 -0.56 -0.73 -1.03 -1.13 -0.6 -0.5 -0.37 0.23
- - - - - -2.69 -1.68 -1.54 - - - - 1.0 -0.53 - - -2.58 3.09 -2.97 -2.86 - - 4.0 - -1.73 - - -2.66 -0.81 -1.84 0.35
-4.27 -3.07 -4.6 -3.94 0.51 0.02 -2.98 -2.53 -2.1 -2.03 -2.15 -2.02 0.19 0.01 -0.04 -0.24 -1.47 2.04 -1.02 -1.99 -1.38 -1.39 3.57 -1.46 -1.18 -1.67 -1.91 -1.25 0.38 -0.25 0.35
-3.7 -2.93 -4.51 -3.6 -1.73 -2.37 -2.22 -2.08 -2.13 -2.11 -2.35 -1.54 1.31 -1.32 -0.91 -1.82 -1.79 3.15 -2.66 -2.24 -2.07 -1.86 3.44 -1.74 -1.77 -1.49 -2.15 -2.21 -2.38 -1.97 1.18
-2.26 -1.89 -1.28 -2.28 -0.85 -0.99 -0.59 -0.6 -0.86 -0.58 -0.25 -0.08 -0.24 0.24 0.86 -0.41 -0.48 1.72 -0.55 -0.63 -0.53 -0.95 3.01 -0.83 -0.7 -0.81 -0.61 -1.69 -0.35 -0.07 -0.18
-0.63 -0.69 -0.84 -0.68 0.12 0.06 -0.59 -0.63 -0.64 -0.63 -0.48 -0.63 0.02 1.19 0.56 -0.15 -0.41 0.61 -0.01 -0.41 -0.4 -0.38 2.2 -0.32 -0.47 -0.38 -0.3 -0.6 -0.01 -0.08 -0.07
-3.69 -3.41 -1.83 -0.71 -0.36 -0.25 -1.72 -1.82 -0.93 -1.32 -0.44 -0.44 0.89 -1.05 -1.45 -0.65 -0.88 2.06 -2.12 -1.48 -0.95 -1.05 3.34 -0.75 -0.79 -1.04 -1.14 -1.1 -0.86 -0.74 0.88
-1.46 -1.73 -1.99 -2.56 -0.8 -0.68 -1.02 -1.52 -0.46 -0.47 -0.22 -0.36 0.58 1.28 0.43 -0.85 -0.72 1.89 -0.46 -0.61 -0.75 -1.27 2.81 -0.71 -0.82 -0.98 -1.13 -1.5 -1.06 -0.52 0.65
-1.1 -0.79 -1.27 -1.83 -1.13 -0.95 -0.75 -0.94 -1.12 -1.05 -1.42 -1.31 -1.41 0.79 -0.38 -1.3 -1.58 2.05 -0.79 -1.04 -1.5 -0.92 3.21 -1.03 -0.7 -1.82 -0.8 -2.02 -0.18 -0.02 1.26
-1.01 -1.35 -1.52 -1.8 -0.88 -0.47 -0.3 0.06 -0.7 -0.71 -0.58 -0.91 0.23 0.88 0.66 -0.31 -0.3 1.47 -0.21 -0.59 -0.58 -0.65 2.58 -0.53 -0.53 -0.57 -0.56 -0.28 -0.53 -0.42 0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.