Heatmap: Cluster_185 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_14480.1 (FAS1)	-0.51	-0.57	-0.61	-0.42	0.05	-0.14	-0.03	0.01	-0.57	-0.27	-0.18	-0.29	1.02	0.56	0.3	-0.13	-0.21	0.15	-0.2	-0.23	-0.21	-0.27	0.21	-0.03	-0.2	-0.2	-0.24	-0.31	0.16	0.21	1.17
Lsat_1_v5_gn_1_27061.1 (ATM)	-0.56	-0.86	-0.92	-0.84	-0.11	-0.48	-0.56	-0.77	-0.25	-0.2	-0.27	-0.01	1.01	1.01	0.36	-0.36	-0.35	0.42	-0.63	-0.57	-0.45	-0.32	0.5	-0.4	-0.31	-0.24	-0.32	-0.19	0.41	0.42	1.58
Lsat_1_v5_gn_1_28820.1 (REF6)	-0.47	-0.48	-0.57	-0.04	0.08	0.15	-0.04	-0.04	-0.15	-0.12	-0.09	-0.06	0.48	0.37	0.11	0.04	-0.17	-0.18	-0.07	-0.36	-0.16	-0.1	0.16	-0.17	-0.0	0.01	-0.13	-0.21	0.23	0.25	0.85
Lsat_1_v5_gn_1_32000.1 (PRE)	-0.95	-0.67	-1.29	-1.01	-0.11	0.08	-0.21	0.11	-0.34	-0.33	-0.18	-0.22	0.83	0.58	0.25	0.05	-0.01	-0.14	-0.15	-0.25	-0.29	-0.16	0.45	-0.06	-0.08	-0.11	-0.16	-0.22	0.27	0.37	1.25
Lsat_1_v5_gn_1_32080.1 (FDM1)	-0.62	-0.46	-0.73	-0.58	0.38	0.25	-0.08	-0.13	-0.26	-0.13	-0.07	-0.08	0.67	0.32	0.28	0.02	-0.08	-0.13	-0.04	-0.08	-0.27	-0.21	-0.06	-0.08	-0.04	-0.13	-0.17	-0.19	0.08	0.1	1.09
Lsat_1_v5_gn_1_3860.1 (MBD8)	-0.73	-0.73	-0.48	0.13	0.16	0.09	-0.23	-0.27	-0.09	-0.0	-0.2	-0.11	0.5	0.74	0.35	0.02	-0.09	-0.04	-0.06	-0.12	-0.32	-0.17	0.15	-0.2	-0.31	-0.08	-0.14	-0.4	0.18	0.17	0.9
Lsat_1_v5_gn_1_68301.1	-2.31	-1.84	-2.08	-1.25	-0.52	-0.24	-0.21	-0.03	-0.86	-0.71	-1.14	-0.3	0.78	1.2	0.76	-0.03	0.11	0.08	-0.2	-0.16	-0.31	-0.17	0.5	0.01	-0.06	-0.3	-0.61	-0.45	0.79	0.58	1.57
Lsat_1_v5_gn_2_101121.1 (HLQ)	-0.46	-0.38	-0.54	-0.66	0.18	0.02	-0.52	-0.34	-0.35	-0.11	-0.08	-0.05	0.64	0.72	0.43	-0.16	-0.28	0.07	-0.06	-0.27	-0.3	-0.18	0.46	-0.11	-0.16	-0.19	-0.28	-0.16	0.3	0.26	0.93
Lsat_1_v5_gn_2_115260.1	-0.25	-0.28	0.03	0.08	0.02	-0.27	-0.4	-0.56	-0.16	-0.23	-0.04	-0.07	0.39	0.59	0.48	0.1	-0.08	0.07	-0.13	-0.46	-0.3	-0.2	0.06	-0.09	-0.18	-0.23	-0.04	-0.56	0.03	0.42	0.98
Lsat_1_v5_gn_2_124121.1 (CHC1)	-0.8	-0.26	-1.05	-0.75	0.15	0.17	-0.5	-0.38	-0.39	-0.1	0.01	-0.01	0.79	0.68	0.28	0.17	0.02	-0.29	-0.12	-0.32	-0.36	-0.19	0.02	-0.13	-0.16	-0.08	-0.12	-0.25	0.31	0.45	1.05
Lsat_1_v5_gn_2_19760.1 (ICU9)	-0.47	-0.37	-0.23	0.14	0.2	-0.06	-0.27	-0.4	-0.08	-0.01	0.07	0.04	0.71	0.3	0.15	0.13	0.04	-0.11	-0.33	-0.23	-0.23	-0.18	0.13	-0.27	-0.2	-0.18	-0.21	-0.05	0.08	0.19	0.77
Lsat_1_v5_gn_2_67320.1 (R1)	-0.85	-0.76	-0.85	-1.0	-0.16	-0.25	-0.5	-0.28	-0.17	-0.23	-0.5	-0.13	1.07	0.64	0.21	-0.26	-0.17	0.5	-0.38	-0.49	-0.29	-0.19	-0.01	-0.0	-0.14	-0.09	-0.23	-0.43	0.34	0.49	1.55
Lsat_1_v5_gn_3_110821.1	-0.67	-0.69	-0.38	-0.39	0.05	0.09	-0.3	-0.06	-0.27	-0.09	-0.07	-0.02	0.74	0.48	0.33	-0.03	-0.14	-0.41	-0.04	-0.21	-0.3	-0.2	0.29	-0.21	-0.18	-0.2	-0.43	-0.4	0.22	0.4	1.22
Lsat_1_v5_gn_3_140321.1 (emb1703)	-1.04	-0.76	-1.29	-0.96	0.26	0.2	-0.6	-0.01	-0.75	-0.49	-0.54	-0.21	0.41	1.0	0.48	-0.19	-0.24	-0.32	-0.21	-0.64	-0.33	-0.27	0.66	0.02	-0.23	-0.21	-0.48	-0.51	0.76	0.68	1.46
Lsat_1_v5_gn_3_33580.1 (DUF179)	-0.58	-0.3	-0.39	0.22	0.22	0.11	-0.02	-0.2	-0.08	-0.15	-0.03	-0.12	0.18	0.46	0.26	-0.06	0.01	-0.2	-0.03	-0.22	-0.38	-0.17	0.52	-0.34	-0.25	-0.21	-0.14	-0.33	0.2	0.33	0.72
Lsat_1_v5_gn_3_76420.1 (DML1)	-0.73	-0.53	-0.5	-0.23	0.32	-0.06	-0.62	-0.37	-0.25	-0.16	-0.04	-0.03	0.5	0.63	0.52	-0.04	-0.08	-0.31	-0.29	-0.41	-0.32	-0.26	0.3	-0.2	-0.26	-0.22	-0.39	-0.46	0.28	0.53	1.35
Lsat_1_v5_gn_3_94320.1	-0.69	-0.86	-0.59	-0.28	-0.08	-0.02	-0.32	-0.33	-0.26	-0.04	-0.01	0.07	0.5	0.55	0.21	-0.17	-0.2	0.29	-0.14	-0.09	-0.27	-0.23	0.23	-0.19	-0.01	0.05	-0.22	-0.27	0.19	0.45	1.1
Lsat_1_v5_gn_4_134440.1 (PDS5B)	-0.54	-0.52	-0.9	-0.97	-0.07	-0.2	-0.16	-0.16	-0.16	-0.11	-0.31	-0.25	0.75	0.62	0.51	-0.12	-0.14	0.15	-0.03	-0.18	-0.32	-0.27	0.31	-0.09	-0.3	-0.33	-0.28	-0.46	0.21	0.45	1.36
Lsat_1_v5_gn_4_27300.1	-1.29	-1.3	-1.57	-1.36	0.12	-0.45	-0.76	-0.82	-0.51	-0.46	-0.41	-0.6	1.39	0.82	0.5	-0.3	-0.38	0.7	-0.78	-0.82	-0.54	-0.29	0.82	-0.16	-0.47	-0.61	-0.22	-1.02	-0.21	0.4	2.14
Lsat_1_v5_gn_4_2880.1	-0.89	-0.9	-1.38	-0.91	0.17	0.06	-0.23	-0.37	-0.34	-0.38	-0.54	-0.55	1.3	0.82	0.82	-0.38	-0.48	0.36	0.01	-0.14	-0.42	-0.16	0.2	-0.19	-0.25	-0.19	-0.29	-0.44	0.05	-0.12	1.45
Lsat_1_v5_gn_4_6600.1 (YY1)	-0.7	-1.07	-1.17	-1.36	0.21	-0.03	-0.95	-0.61	-0.39	-0.31	-0.11	0.14	0.88	0.71	0.61	-0.37	-0.16	0.24	-0.11	0.0	-0.31	-0.16	0.61	-0.12	-0.22	-0.36	-0.3	-0.3	0.1	0.36	1.39
Lsat_1_v5_gn_4_71281.1 (RID1)	-0.57	-1.02	-1.18	-0.86	0.02	-0.11	-0.44	0.27	-0.53	-0.52	-0.5	-0.45	1.07	0.88	0.6	-0.03	-0.11	0.16	-0.43	-0.28	-0.36	-0.04	0.08	-0.24	-0.16	-0.17	-0.7	-0.24	0.43	0.16	1.44
Lsat_1_v5_gn_4_73020.1 (RDR2)	-0.65	-0.19	-0.73	-0.67	0.06	0.03	-0.51	-0.46	-0.4	-0.6	-0.74	-0.36	0.72	1.1	0.61	-0.09	-0.13	-0.28	-0.1	-0.68	-0.26	-0.28	0.39	-0.44	-0.27	-0.25	-0.69	-0.19	0.59	0.43	1.42
Lsat_1_v5_gn_4_74700.1	-0.96	-0.8	-1.64	-1.2	-0.17	-0.21	-0.61	-0.2	-0.89	-0.88	-0.66	-0.28	1.13	0.98	0.39	-0.09	-0.11	-0.03	-0.73	-0.56	-0.32	-0.27	0.54	-0.13	-0.19	-0.37	-0.52	-0.15	0.57	0.69	1.76
Lsat_1_v5_gn_5_112800.1 (CHR25)	-0.45	-0.61	-0.84	-0.89	0.03	-0.06	-0.36	-0.24	-0.42	-0.28	-0.21	-0.34	1.03	0.8	0.56	-0.2	-0.27	0.32	0.08	-0.39	-0.3	-0.33	0.37	-0.25	-0.33	-0.38	-0.37	-0.35	0.03	0.5	1.23
Lsat_1_v5_gn_5_14721.1	-0.84	-0.71	-1.11	-0.43	0.09	-0.07	-0.27	-0.57	-0.29	-0.21	0.1	-0.25	0.62	0.88	0.42	0.16	-0.23	0.08	0.11	-0.2	-0.45	-0.29	0.16	-0.42	-0.36	-0.39	-0.25	-0.5	0.2	0.46	1.48
Lsat_1_v5_gn_5_170940.1 (OPL2)	-2.01	-1.68	-1.62	-0.97	-0.57	-0.63	-0.6	-0.56	-0.24	-0.17	-0.33	-0.24	0.9	1.2	0.68	-0.23	-0.27	0.23	-0.18	-0.37	-0.59	-0.49	0.52	-0.16	-0.05	-0.67	-0.55	-1.04	0.65	0.46	1.96
Lsat_1_v5_gn_5_178381.1 (AUG3)	-0.18	-0.47	-0.63	-0.43	0.14	0.08	-0.15	-0.2	-0.23	-0.18	-0.18	-0.11	0.58	0.6	0.41	-0.08	-0.21	0.14	-0.2	-0.27	-0.16	-0.16	0.36	-0.34	-0.07	-0.18	-0.15	0.01	0.17	0.18	0.77
Lsat_1_v5_gn_5_2260.1 (KP1)	-1.55	-1.25	-0.67	-0.01	0.47	0.08	-0.5	-0.68	-0.05	-0.13	0.07	0.1	0.5	0.45	0.69	-0.05	-0.24	0.13	0.03	-0.1	-0.31	-0.46	0.27	-0.24	-0.35	-0.14	-0.26	-0.31	-0.04	0.31	1.29
Lsat_1_v5_gn_6_56060.1 (PSL4)	-1.19	-1.02	-0.92	-1.05	0.36	0.2	-0.48	-0.8	-0.28	-0.31	0.04	0.05	0.87	0.66	0.38	0.11	-0.19	0.42	-0.37	-0.19	-0.35	-0.38	0.36	-0.28	-0.33	-0.37	-0.34	-0.3	0.18	0.34	1.47
Lsat_1_v5_gn_6_69301.1 (SAC3B)	-0.95	-0.59	-0.75	-0.46	-0.02	-0.01	-0.27	-0.16	-0.37	-0.13	-0.12	0.0	0.52	0.68	0.31	-0.06	-0.07	-0.05	0.07	-0.24	-0.27	-0.15	0.43	-0.25	-0.08	-0.09	-0.19	-0.35	0.28	0.38	1.09
Lsat_1_v5_gn_6_69380.1 (PLANTKAP)	-0.94	-0.75	-1.16	-1.07	0.26	0.18	-0.14	0.25	-0.6	-0.6	-0.51	-0.43	1.21	0.88	0.38	-0.07	-0.12	0.2	-0.63	-0.63	-0.26	-0.23	0.32	-0.11	-0.13	-0.17	-0.38	-0.19	0.09	0.03	1.38
Lsat_1_v5_gn_7_109061.1 (CN)	-1.02	-0.74	-0.92	-0.66	0.16	0.02	-0.33	-0.07	-0.05	-0.1	0.2	0.18	0.86	0.3	0.11	-0.03	0.07	-0.32	-0.17	-0.09	-0.21	0.0	-0.65	-0.01	0.02	0.08	-0.09	-0.2	0.21	0.34	1.08
Lsat_1_v5_gn_7_19361.1 (GEM1)	-0.39	-0.21	-0.2	0.09	0.22	-0.1	-0.49	-0.68	-0.04	-0.03	0.1	-0.04	0.44	0.42	0.22	-0.05	-0.14	0.07	-0.16	-0.21	-0.32	-0.28	0.1	-0.28	-0.23	-0.18	-0.26	-0.27	0.32	0.46	0.96
Lsat_1_v5_gn_7_20480.1 (B160)	-0.79	-0.72	-0.73	-0.08	0.11	-0.15	-0.13	-0.07	-0.25	-0.14	-0.14	-0.11	0.4	0.57	0.38	0.12	-0.07	-0.13	-0.04	-0.3	-0.23	-0.21	0.27	-0.12	-0.21	-0.2	-0.22	-0.27	0.33	0.47	1.06
Lsat_1_v5_gn_7_31901.1 (LAF3)	-0.62	-0.53	-0.62	-0.58	0.18	0.14	-0.31	-0.2	-0.2	-0.25	-0.14	-0.12	0.9	0.78	0.48	-0.08	-0.22	-0.48	-0.13	-0.32	-0.33	-0.16	-0.06	-0.15	-0.19	-0.2	-0.24	-0.3	0.13	0.27	1.28
Lsat_1_v5_gn_7_55961.1 (PEP)	-1.65	-1.17	-1.08	-1.36	-0.6	-0.42	-1.31	-0.99	-0.37	-0.59	-0.53	0.15	0.87	1.01	0.27	0.14	0.02	0.28	-0.7	-0.58	-0.35	-0.25	0.94	-0.43	-0.16	-0.43	-0.24	0.02	0.49	0.59	1.79
Lsat_1_v5_gn_7_7601.1 (BCHC2)	-0.58	-0.44	-0.59	-0.47	0.12	0.05	-0.38	-0.58	-0.19	-0.01	0.0	0.1	0.68	0.58	0.28	0.1	0.03	-0.39	-0.19	-0.21	-0.36	-0.2	0.12	-0.25	-0.11	-0.11	-0.21	-0.14	0.35	0.4	0.99
Lsat_1_v5_gn_7_97220.1	-1.14	-1.51	-2.36	-2.7	-0.17	-0.16	-1.78	-0.73	-0.26	-0.83	-0.37	0.06	1.59	0.82	0.05	-0.23	-0.14	0.38	-0.25	-0.53	-0.44	-0.72	-0.48	-0.19	-0.17	-0.07	-0.4	-0.67	0.43	0.83	2.08
Lsat_1_v5_gn_8_109740.1 (ARP4)	-0.77	-0.64	-0.77	-0.9	0.1	0.2	-0.33	-0.03	-0.52	-0.31	-0.31	-0.31	0.94	0.97	0.39	-0.33	-0.3	0.4	-0.23	-0.37	-0.27	-0.22	0.13	-0.18	-0.13	-0.27	-0.22	-0.32	0.23	0.25	1.24
Lsat_1_v5_gn_8_159900.1 (NAT7)	-0.75	-0.85	-0.5	-0.16	0.22	-0.1	-0.64	-1.19	-0.11	-0.09	0.1	0.05	0.77	0.68	0.77	-0.04	-0.06	-0.23	-0.24	-0.26	-0.45	-0.33	0.66	-0.1	-0.27	-0.42	-0.33	-0.34	-0.08	0.43	1.09
Lsat_1_v5_gn_8_32481.1 (UNG)	-0.59	-0.68	-1.05	-0.92	-0.11	-0.04	-0.38	0.03	-0.43	-0.41	-0.37	-0.34	1.14	0.38	0.21	-0.14	0.0	0.22	-0.11	-0.32	0.02	-0.07	0.19	-0.03	-0.13	-0.08	-0.13	-0.37	0.05	0.17	1.44
Lsat_1_v5_gn_8_35661.1	-0.65	-0.33	-0.47	-0.58	0.1	0.12	-0.47	-0.24	-0.31	-0.27	-0.39	-0.13	0.43	0.78	0.42	-0.13	-0.14	0.04	-0.18	-0.47	-0.19	-0.07	-0.04	0.04	-0.13	-0.26	-0.25	-0.4	0.51	0.44	1.21
Lsat_1_v5_gn_8_36721.1 (CIL1)	-0.63	-0.61	-0.38	0.31	0.18	-0.17	-0.32	-0.66	-0.24	-0.18	0.15	-0.08	0.32	0.57	0.44	-0.04	-0.2	-0.02	-0.28	-0.13	-0.21	-0.03	0.41	-0.47	-0.23	-0.11	-0.07	-0.41	0.23	0.44	0.91
Lsat_1_v5_gn_8_47881.1 (QUL2)	-0.75	-0.44	-0.16	0.01	0.09	-0.17	-0.28	-0.5	-0.24	0.1	0.12	0.03	0.23	0.45	0.25	0.06	0.11	0.02	-0.04	-0.19	-0.14	-0.25	0.39	-0.18	-0.22	0.06	-0.24	-0.14	0.05	0.3	0.73
Lsat_1_v5_gn_8_5221.1 (IDN1)	-0.67	-0.77	-0.56	-0.38	0.08	-0.04	-0.24	-0.27	-0.13	-0.07	0.15	0.06	0.77	0.18	0.23	-0.25	-0.08	-0.13	-0.16	-0.18	-0.2	-0.07	-0.26	0.05	0.01	0.0	-0.15	-0.35	0.19	0.43	1.17
Lsat_1_v5_gn_8_77660.1 (HTB4)	-1.17	-1.09	-1.45	-1.14	-0.08	0.41	0.02	0.07	-0.14	-0.19	-0.02	-0.11	1.06	0.29	0.16	0.09	-0.1	-0.1	-0.15	-0.29	-0.07	-0.12	-0.26	-0.06	-0.02	-0.08	-0.09	-0.34	0.18	0.14	1.38
Lsat_1_v5_gn_8_8061.1 (CPSF160)	-0.67	-0.64	-0.95	-0.57	-0.13	0.02	-0.25	-0.24	-0.24	-0.11	-0.26	-0.14	0.57	0.82	0.5	-0.04	-0.03	-0.09	-0.16	-0.4	-0.29	-0.12	0.05	-0.09	-0.21	-0.09	-0.17	-0.29	0.41	0.5	1.15
Lsat_1_v5_gn_8_93941.1 (SPI)	-1.05	-0.95	-1.21	-1.26	-0.29	-0.47	-0.62	-0.73	-0.12	-0.12	-0.18	0.0	1.01	0.34	0.05	-0.1	-0.07	0.23	-0.44	-0.47	-0.41	-0.46	0.76	0.05	0.06	-0.16	-0.25	-0.11	0.26	0.59	1.67
Lsat_1_v5_gn_9_104801.1 (NUP133)	-1.01	-0.65	-1.0	-0.58	-0.06	0.04	-0.36	-0.06	-0.57	-0.38	-0.6	-0.19	0.79	0.69	0.21	-0.02	-0.06	-0.19	-0.34	-0.39	-0.34	-0.33	0.67	-0.3	-0.18	-0.28	-0.33	-0.43	0.39	0.5	1.66
Lsat_1_v5_gn_9_109381.1 (ATPI4K ALPHA)	-0.38	-0.27	-0.38	-0.22	0.3	-0.01	-0.35	-0.6	-0.04	-0.0	0.05	-0.03	0.42	0.35	0.17	0.04	-0.01	-0.2	-0.08	-0.25	-0.27	-0.16	0.32	-0.24	-0.13	-0.06	-0.11	-0.11	0.28	0.37	0.73
Lsat_1_v5_gn_9_19721.1 (CYP5)	-1.62	-1.2	-1.52	-1.34	-0.11	0.31	-0.06	0.18	-0.42	-0.17	-0.08	0.02	0.79	0.43	0.4	0.08	-0.05	-0.17	-0.27	-0.1	-0.2	0.01	0.19	0.05	-0.09	-0.05	0.07	-0.29	0.09	0.3	1.29
Lsat_1_v5_gn_9_29980.1	-1.26	-0.79	-1.01	-0.96	0.13	0.08	-0.79	-0.45	-0.28	-0.29	-0.26	-0.22	0.62	1.24	0.55	-0.17	-0.37	0.25	-0.01	-0.41	-0.34	-0.15	0.25	-0.5	-0.46	-0.17	-0.35	-0.58	0.42	0.54	1.48
Lsat_1_v5_gn_9_60521.1 (TPR9)	-1.17	-1.0	-1.55	-1.58	0.15	0.25	-0.43	-0.47	-0.68	-0.48	-0.68	-0.55	0.31	1.24	0.87	-0.16	-0.42	0.25	0.05	-0.72	-0.61	-0.55	0.67	-0.4	-0.56	-0.36	-0.37	-0.86	0.87	0.62	1.69
Lsat_1_v5_gn_9_69261.1 (DMS2)	-1.3	-1.17	-1.38	-0.68	0.07	-0.16	-0.84	-0.8	-0.5	-0.18	-0.14	-0.23	1.11	0.7	0.47	-0.09	-0.33	0.28	-0.31	-0.32	-0.18	-0.32	0.47	-0.28	-0.2	-0.38	-0.35	-0.59	0.4	0.46	1.73
Lsat_1_v5_gn_9_8981.1 (PARP1)	-0.75	-0.72	-0.89	-0.74	0.0	0.16	-0.15	0.02	-0.22	0.0	-0.03	-0.05	0.85	0.45	0.08	-0.05	-0.12	-0.52	-0.17	-0.19	-0.27	-0.12	-0.16	-0.12	-0.14	-0.08	-0.23	-0.19	0.22	0.44	1.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.