Heatmap: Cluster_182 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.2 - - - 0.15 -0.99 -1.08 -1.95 -3.53 -1.95 -1.65 -3.68 -2.01 0.54 0.97 -1.13 -2.25 3.73 -0.8 -1.33 -0.55 -0.5 1.69 -0.06 -0.17 -0.43 -0.54 -2.64 -1.39 - -
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- -6.36 - -6.49 -3.68 -2.64 -4.52 -4.97 -4.8 -6.71 - -4.55 -3.0 -2.97 -1.52 -6.56 -5.85 4.6 -4.67 -4.5 -3.56 -6.76 2.33 -3.8 -3.43 - -3.45 -5.69 -4.8 -3.75 -6.77
- - - - -3.01 -1.46 -5.36 - -4.06 -3.4 -4.41 -4.47 -1.67 -1.73 -2.52 -5.32 -5.6 4.37 - -3.34 -3.28 - 2.99 -2.59 -2.35 - -3.85 -3.81 -4.47 - -
- - - - -3.55 -4.91 -6.69 - -7.44 -7.35 -4.57 -5.98 -3.73 -5.58 -5.4 -8.38 -6.26 4.32 -6.43 -8.03 -5.19 -7.17 3.37 -3.24 -3.92 -6.66 -5.86 -7.29 -5.5 -6.46 -5.62
-6.94 -5.24 -5.92 -5.94 -0.19 -1.39 -4.7 -5.56 -3.97 -4.13 -5.11 -4.65 -1.47 -0.15 1.08 -3.87 -4.21 4.15 -2.46 -4.25 -3.57 -3.66 2.78 -2.81 -3.17 -3.98 -3.1 -3.43 -3.55 -2.55 -3.66
-1.71 -1.12 - - -3.24 -4.15 - -3.89 - - - - -2.35 0.29 -0.1 - - 4.27 - - - - 3.05 - -4.15 - - - - - -
-0.13 -2.08 -1.67 -1.79 -1.64 -2.39 -3.55 -3.79 -4.21 -2.43 -2.66 -3.73 -0.91 -0.58 -0.34 -2.64 -1.53 4.21 -2.88 -2.62 -2.76 -3.14 2.35 -2.3 -2.46 -2.86 -2.99 -1.89 -4.32 -2.83 -1.79
- - - - -5.15 -2.83 -5.18 -2.64 -4.04 -5.28 - -3.18 -5.1 -2.14 -0.84 - - 4.55 -2.82 -2.36 - - 2.52 - -4.24 -5.17 -5.03 -5.15 - - -
-1.41 -3.41 -1.57 - -0.35 -1.14 -2.8 -2.21 -4.25 -3.03 -1.95 -3.97 -1.37 0.95 1.78 -1.34 -2.11 3.89 -1.52 -2.53 -1.86 -2.8 2.24 -2.68 -3.14 -1.75 -3.18 -2.22 -2.32 -3.12 -
-1.81 -3.6 -3.42 -3.37 -1.18 -1.88 - - -6.41 -6.4 -6.23 -6.31 -1.9 -0.69 0.52 -5.16 - 4.3 -2.78 - -3.85 - 2.75 -2.79 -2.41 -4.39 -4.68 -4.66 -4.0 -6.42 -2.4
-1.46 0.14 -1.59 -1.89 0.26 0.21 -1.8 -1.69 -1.0 -1.06 -0.82 -0.95 0.31 -0.0 0.34 -0.4 -1.03 3.0 -0.82 -0.59 -0.68 -0.78 1.86 -0.8 -0.94 -0.41 -1.35 -1.14 -0.57 -0.39 -0.03
-0.51 - - - - - - - - - - - - - - - - 4.54 - - - - 2.83 - - - - - - - -
-1.35 1.15 -0.84 -3.81 0.79 -1.3 -3.83 -5.29 -3.93 - - -6.32 -2.19 -1.52 -2.06 -5.26 -6.66 4.16 -4.96 - -4.04 -3.35 2.63 -4.0 -3.91 -5.07 -2.98 -6.39 -6.38 -5.01 -
- -1.93 - - -0.53 - -0.25 -2.18 -3.18 -1.9 -2.87 -4.15 -0.31 -1.02 0.1 -0.79 -3.8 3.96 -2.62 - -2.11 -2.7 3.01 -3.98 -1.42 - -1.58 -2.61 - -1.71 -
-5.53 - - - -2.04 -2.5 -5.72 -6.73 -7.06 - -4.85 - -3.25 -2.82 -1.2 - - 4.49 -3.33 -5.14 - -5.9 2.77 -4.22 -3.13 -6.94 -4.8 - - -4.2 -5.47
-2.93 -4.67 -6.77 - -1.49 -2.39 -4.5 -5.31 -4.48 -4.86 -2.18 -6.1 -3.03 -0.92 -1.57 -3.67 -4.36 4.43 -3.06 -3.2 -4.09 -4.7 2.68 -3.04 -3.31 -4.79 -4.49 -4.69 -4.31 -5.15 -4.13
-3.82 -1.01 -2.31 -4.92 -2.48 -4.63 -3.77 -2.91 -3.97 - - -4.36 -4.09 -0.66 -0.43 -3.22 - 4.32 -3.59 - -4.27 -2.81 2.83 - -4.11 -5.23 -2.83 -5.22 -3.57 -3.76 -1.78
- - - - 0.1 - -1.07 -2.43 - - -0.57 -2.63 1.89 - - -1.2 - 4.35 - -0.42 -2.86 - -1.63 - -1.71 - - -1.11 - -0.7 0.38
- - - - -0.3 - 1.59 - -0.53 -0.42 -0.3 - - - 1.82 0.1 - 3.99 - - - - 1.72 - - - - - - - 0.14
-1.44 -1.91 -2.95 -3.82 0.44 0.32 -2.55 -3.12 -1.23 -1.49 -1.49 -1.64 -1.36 0.86 0.67 -0.94 -1.46 3.49 -0.67 -1.03 -1.37 -1.32 2.11 -0.76 -1.08 -1.27 -1.14 -1.63 -1.46 -0.81 -1.03
-0.04 0.42 -0.78 -1.77 1.03 0.26 -1.57 -1.66 -2.35 -3.03 -2.67 -2.8 -0.64 0.47 0.62 -1.6 -2.03 3.49 -1.18 -2.26 -1.07 -2.21 2.04 -1.99 -1.67 -2.67 -1.19 -1.05 -1.34 -2.04 -2.44
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
-2.22 -1.96 -1.2 -1.81 0.21 0.15 -0.94 -1.45 -0.73 -1.66 -0.95 -1.06 0.0 0.81 0.49 -0.87 -0.18 3.14 -0.79 -0.78 -0.83 -1.62 1.62 -0.49 -0.4 -0.9 -0.51 -0.78 -0.9 -0.84 -0.24
- - - - - - - - - - - - - - - - - 4.7 - - - - 2.32 - - - - - - - -
-3.99 -3.6 -3.32 -5.64 -0.51 -1.27 -2.65 -4.07 -3.7 -1.99 -3.29 -4.96 -0.42 -0.36 0.2 -2.41 -2.69 3.98 -1.56 -2.84 -3.53 -2.06 2.93 -2.44 -1.8 -2.01 -1.82 -2.44 -2.65 -3.44 -1.82
-3.4 -0.95 -2.93 -2.95 -0.54 -1.29 -4.33 - - - - - -2.66 -1.45 -1.09 - -5.75 4.54 -4.65 -5.25 - -7.24 2.16 -5.9 -3.02 -7.36 -5.22 -5.7 - -5.45 -
- - - - -1.74 - - - - - - - - - - - - 4.86 - - - - 0.76 - - - - - - - -
- - - -3.3 -1.79 -3.02 - - - - - - -2.64 - -2.86 - - 4.48 - - - - 2.96 -4.55 - - - -4.46 - - -
- - - - - -1.85 - - - - - - -0.71 - - - - 4.55 - - - - 2.43 - - - - - -0.88 - -0.37
- - - 1.37 -2.26 - - - -0.62 - - -2.18 -0.25 -0.11 - -1.78 - 3.74 - - - -1.74 2.72 -2.15 - -2.31 -0.86 - 0.92 0.73 -1.04
-6.43 -7.51 - - -1.44 -2.05 - -6.92 - - -4.71 -6.65 -2.06 -0.13 0.61 -6.08 - 4.26 -3.13 -7.92 -6.33 -4.64 2.93 -2.56 -1.72 - -3.33 -4.75 -4.67 -5.28 -6.07
- - - - - - - - - - - - - - - - - 4.7 - - - - 2.32 - - - - - - - -
- - - - - - - - - - - - 0.82 - - - - 4.48 - - - - 2.23 - - - - - - - 1.17
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - - -2.67 -3.58 -1.57 - - - - - -0.44 -3.18 -3.36 - - 4.57 - - - - 2.43 - - - -1.92 - - - -
-2.53 -2.21 -2.22 -0.99 -1.26 -2.13 -2.32 -2.09 -0.72 -1.57 -1.25 -0.9 0.67 -0.51 -0.67 -1.08 -0.9 3.36 -4.07 -1.32 -1.79 -0.98 2.84 -0.34 -2.17 -1.36 -0.88 -1.13 -1.23 -0.57 -0.32
-3.67 -2.35 -2.01 -2.5 -1.25 -1.2 -2.27 -2.11 -2.94 -2.32 -2.14 -2.6 -0.7 -0.06 -0.63 -2.11 -2.06 4.03 -1.91 -2.4 -2.33 -1.88 2.43 -2.25 -1.13 -2.78 -1.79 -2.88 -1.59 -0.45 -0.75
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- -2.97 - - -3.36 -1.05 -3.39 -3.19 - -3.51 -0.95 -3.41 -0.74 -3.04 -2.29 -1.46 -1.36 4.13 - -3.51 -2.59 -2.25 2.79 -0.96 -1.9 -0.98 -0.08 -1.56 - -1.67 -
-3.15 -2.36 -3.44 -4.11 1.38 -0.51 -4.14 -5.21 -3.97 -3.94 -3.49 -4.74 -1.19 0.07 0.54 -3.08 -4.16 4.01 -1.06 -3.82 -2.16 -2.49 2.34 -1.37 -1.89 -3.06 -1.94 -2.21 -3.67 -1.62 -4.78
- - - - - - - - - - - - - - - - - 4.3 - - - - 3.21 - - - - - - 1.04 -
-1.23 0.12 -3.71 -2.63 -0.09 -0.41 -0.97 -0.17 -2.07 -2.64 -1.18 -1.91 -0.79 0.16 0.25 -0.92 -1.13 3.72 -0.85 -1.5 -1.72 -1.41 1.57 -1.13 -1.87 -1.9 -1.6 -1.66 -1.11 -0.48 -0.7
-2.43 -2.4 -1.47 - 0.55 0.18 -2.65 - -0.72 - -1.61 - -1.65 -0.61 0.17 -0.62 -1.96 4.08 -2.43 -1.41 - -2.84 -1.0 -0.56 -1.89 -1.78 -1.27 - - -2.9 1.87
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- -5.37 - -5.4 -1.67 -1.47 - - -3.64 - -4.69 -4.95 -2.6 -1.17 -1.7 -5.35 -3.77 4.27 -4.26 -4.98 -4.01 -2.73 3.14 -1.68 -3.87 -5.95 -4.98 -3.5 -4.16 -5.84 -3.37
- - - - -3.41 -1.13 - - - - - - 0.03 - -3.13 - - 4.42 - - - -3.37 2.9 -2.44 - - - - -3.35 - -
-7.8 -7.99 -9.01 - -1.54 -2.06 -5.93 -6.51 -6.22 -7.14 -6.07 -6.81 -2.48 -1.29 0.33 -4.23 -5.49 4.41 -2.2 -5.02 -3.73 -4.0 2.61 -2.51 -2.89 -4.7 -3.63 -3.59 -2.87 -3.5 -5.79
-2.39 -1.7 -2.38 -2.85 -1.32 -1.12 0.05 0.43 -1.3 -0.95 -1.63 -0.71 0.04 -0.67 -0.45 -0.15 -0.41 3.55 -1.28 -1.42 -1.3 -1.36 1.85 -0.78 -0.97 -1.27 -1.54 -1.49 -1.27 -0.66 -0.22
-0.14 -0.36 -0.35 -0.54 -1.85 -2.66 -2.5 -2.62 -2.02 -2.11 -1.6 -2.04 0.29 -0.72 -0.75 -0.96 -1.19 3.93 -2.79 -1.46 -1.67 -2.78 1.93 -1.41 -2.36 -1.44 -1.52 -2.18 -2.49 -2.22 -0.49
- -2.5 - -0.24 0.94 -1.38 -2.52 - -0.03 -1.38 -1.9 -3.08 -1.9 -2.76 -0.16 -0.77 -0.73 3.46 - -2.02 -1.12 -1.38 3.12 - -2.98 - -1.7 -2.16 -1.91 -1.3 0.19
- - - - - - - - - - - - - - - - - 4.28 - - - - 3.54 - - - - - - - -
-0.51 -0.87 -0.28 -1.27 -0.19 -1.03 -1.85 -3.51 -1.53 -2.2 -3.72 -2.09 -0.42 -0.26 -0.34 -2.92 -1.71 3.86 -1.54 -2.14 -2.67 -2.46 2.37 -1.95 -1.45 -1.76 -1.28 -1.7 -2.84 -2.07 -1.06
- -3.4 - - -0.4 -0.65 - - - -2.58 -2.71 -2.39 -3.55 -0.76 0.06 - -2.39 4.25 - - - - 2.74 -1.62 -2.23 - -1.33 -2.27 -2.84 -2.86 -
-1.26 -2.93 - -1.96 0.64 0.17 -2.16 -1.13 -1.86 -0.91 -0.7 -1.92 0.48 0.72 0.45 -0.43 -1.29 3.57 -1.42 -2.08 -0.86 -2.15 1.62 -1.54 -1.86 -2.23 -1.57 -2.44 -3.11 -0.65 0.14
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
-5.01 -2.0 - - -0.88 -0.02 -6.22 - - - - - -2.98 -0.18 -0.35 - - 4.45 -3.3 -4.85 -5.55 -4.21 2.33 -4.47 -2.44 -6.33 - -6.26 -5.43 -4.82 -
-2.38 -1.71 -3.13 -0.92 -2.97 -1.62 -3.11 -2.31 -4.97 - -1.9 -2.79 -3.39 - -4.99 -3.93 -2.1 4.34 -4.75 -2.96 -2.75 -1.97 2.71 - -3.62 -4.34 -3.72 -3.49 -1.6 -2.85 -3.14
-1.03 -0.83 -1.6 -5.56 -0.09 -0.36 -1.96 -3.19 -2.53 -3.1 -2.77 -4.25 -1.44 -0.04 1.26 -2.06 -1.83 4.05 -2.64 -2.17 -2.58 -2.42 2.08 -2.08 -2.45 -2.32 -2.6 -3.4 -2.87 -3.06 -3.24
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - -3.39 -5.75 -4.79 - - - - - - -5.71 - - - - 4.52 - - - -4.64 2.95 - -5.85 - - - - - -5.31
-1.53 -1.1 -0.28 0.1 -0.15 -0.82 -2.21 -1.57 -1.88 -1.59 -1.51 -1.87 -1.8 0.66 -0.05 -1.7 -2.48 3.8 -1.01 -2.12 -2.43 -2.47 2.07 -2.75 -2.08 -1.63 -2.06 -2.41 -1.28 -1.09 -1.12
- - 0.14 - - - -0.36 - - -1.75 - - - -1.57 - - -0.54 4.3 - - - - 2.18 -0.87 -1.8 - - - - - 1.43
- - - - - - - - - - - - - - - - - 4.95 - - - - - - - - - - - - -
- - - - -3.15 -5.6 -5.45 -5.38 - -4.38 -3.1 -3.18 -3.77 -4.44 -3.1 -5.38 -4.59 4.28 - -4.75 - -4.65 3.36 -4.09 -2.48 -5.76 -3.86 -4.24 - -3.65 -4.63
-0.03 -0.02 -0.3 -0.24 0.14 0.02 -0.51 -0.39 -0.81 -0.71 -0.62 -0.85 0.11 0.26 0.17 -0.57 -0.6 2.68 -0.48 -0.76 -0.81 -0.62 1.1 -0.71 -0.59 -0.61 -0.48 -0.9 -0.43 -0.47 -0.08
-3.12 - - - 0.1 0.18 -2.16 - -0.76 -2.16 -3.85 - -1.76 -2.22 -3.78 -3.31 -2.6 4.27 -2.17 -4.69 -1.64 - - -3.59 -4.03 -2.32 -1.55 -3.89 -1.42 -2.11 2.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.