Coexpression cluster: Cluster_177 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 10.2% (5/49) 4.46 3e-06 9.7e-05
GO:0044281 small molecule metabolic process 14.29% (7/49) 3.49 3e-06 0.000101
GO:0043038 amino acid activation 8.16% (4/49) 5.42 2e-06 0.000104
GO:0016875 ligase activity, forming carbon-oxygen bonds 8.16% (4/49) 5.42 2e-06 0.000104
GO:0043039 tRNA aminoacylation 8.16% (4/49) 5.42 2e-06 0.000104
GO:0004812 aminoacyl-tRNA ligase activity 8.16% (4/49) 5.42 2e-06 0.000104
GO:0140101 catalytic activity, acting on a tRNA 8.16% (4/49) 4.75 1.5e-05 0.000395
GO:0006399 tRNA metabolic process 8.16% (4/49) 4.56 2.4e-05 0.000573
GO:1901564 organonitrogen compound metabolic process 22.45% (11/49) 2.05 5e-05 0.001053
GO:0034660 ncRNA metabolic process 8.16% (4/49) 4.09 8.9e-05 0.001513
GO:0006520 amino acid metabolic process 8.16% (4/49) 4.05 0.0001 0.001569
GO:0006418 tRNA aminoacylation for protein translation 6.12% (3/49) 5.13 8.5e-05 0.001607
GO:0034641 cellular nitrogen compound metabolic process 16.33% (8/49) 2.29 0.000202 0.002924
GO:0140098 catalytic activity, acting on RNA 8.16% (4/49) 3.64 0.000294 0.003457
GO:0097159 organic cyclic compound binding 28.57% (14/49) 1.48 0.000293 0.003669
GO:1901363 heterocyclic compound binding 28.57% (14/49) 1.48 0.000293 0.003669
GO:0044238 primary metabolic process 26.53% (13/49) 1.54 0.000335 0.003701
GO:0044237 cellular metabolic process 22.45% (11/49) 1.71 0.000397 0.004142
GO:0006082 organic acid metabolic process 8.16% (4/49) 3.38 0.000581 0.00475
GO:0005524 ATP binding 16.33% (8/49) 2.1 0.000488 0.004824
GO:0043436 oxoacid metabolic process 8.16% (4/49) 3.39 0.000567 0.004844
GO:0019752 carboxylic acid metabolic process 8.16% (4/49) 3.39 0.000567 0.004844
GO:0032559 adenyl ribonucleotide binding 16.33% (8/49) 2.02 0.000689 0.004984
GO:0006807 nitrogen compound metabolic process 22.45% (11/49) 1.61 0.000689 0.005178
GO:0003674 molecular_function 55.1% (27/49) 0.79 0.000669 0.005238
GO:0071704 organic substance metabolic process 26.53% (13/49) 1.46 0.000558 0.005242
GO:0043168 anion binding 18.37% (9/49) 1.82 0.000859 0.005386
GO:0006139 nucleobase-containing compound metabolic process 12.24% (6/49) 2.42 0.00085 0.005509
GO:1901265 nucleoside phosphate binding 18.37% (9/49) 1.82 0.00083 0.005571
GO:0000166 nucleotide binding 18.37% (9/49) 1.82 0.00083 0.005571
GO:0030554 adenyl nucleotide binding 16.33% (8/49) 1.93 0.00104 0.006306
GO:0036094 small molecule binding 18.37% (9/49) 1.75 0.001161 0.006819
GO:0140640 catalytic activity, acting on a nucleic acid 8.16% (4/49) 3.09 0.001233 0.007023
GO:0035639 purine ribonucleoside triphosphate binding 16.33% (8/49) 1.88 0.001315 0.00727
GO:0008152 metabolic process 26.53% (13/49) 1.33 0.001355 0.007279
GO:0046483 heterocycle metabolic process 12.24% (6/49) 2.27 0.001439 0.007312
GO:0006725 cellular aromatic compound metabolic process 12.24% (6/49) 2.27 0.001439 0.007312
GO:0032555 purine ribonucleotide binding 16.33% (8/49) 1.81 0.001753 0.00845
GO:1901360 organic cyclic compound metabolic process 12.24% (6/49) 2.22 0.001709 0.008456
GO:0005488 binding 36.73% (18/49) 1.0 0.001815 0.008533
GO:0032553 ribonucleotide binding 16.33% (8/49) 1.8 0.001866 0.008556
GO:0006164 purine nucleotide biosynthetic process 4.08% (2/49) 4.88 0.002102 0.009192
GO:0097367 carbohydrate derivative binding 16.33% (8/49) 1.77 0.002095 0.009378
GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity 2.04% (1/49) 8.63 0.002523 0.009487
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 2.04% (1/49) 8.63 0.002523 0.009487
GO:0006177 GMP biosynthetic process 2.04% (1/49) 8.63 0.002523 0.009487
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity 2.04% (1/49) 8.63 0.002523 0.009487
GO:0046037 GMP metabolic process 2.04% (1/49) 8.63 0.002523 0.009487
GO:0072522 purine-containing compound biosynthetic process 4.08% (2/49) 4.77 0.002424 0.010357
GO:0017076 purine nucleotide binding 16.33% (8/49) 1.73 0.002504 0.010463
GO:0009165 nucleotide biosynthetic process 4.08% (2/49) 4.63 0.002947 0.010655
GO:1901293 nucleoside phosphate biosynthetic process 4.08% (2/49) 4.63 0.002947 0.010655
GO:0043170 macromolecule metabolic process 18.37% (9/49) 1.52 0.003596 0.012755
GO:0006163 purine nucleotide metabolic process 4.08% (2/49) 4.35 0.004354 0.015158
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 2.04% (1/49) 7.63 0.00504 0.015282
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 2.04% (1/49) 7.63 0.00504 0.015282
GO:0016093 polyprenol metabolic process 2.04% (1/49) 7.63 0.00504 0.015282
GO:0019348 dolichol metabolic process 2.04% (1/49) 7.63 0.00504 0.015282
GO:0016070 RNA metabolic process 8.16% (4/49) 2.54 0.004863 0.016039
GO:0072521 purine-containing compound metabolic process 4.08% (2/49) 4.27 0.004802 0.016123
GO:1901137 carbohydrate derivative biosynthetic process 4.08% (2/49) 4.24 0.005035 0.016319
GO:1901566 organonitrogen compound biosynthetic process 8.16% (4/49) 2.55 0.0048 0.016408
GO:0009117 nucleotide metabolic process 4.08% (2/49) 4.11 0.006013 0.017944
GO:1901576 organic substance biosynthetic process 10.2% (5/49) 2.09 0.006176 0.018143
GO:0006753 nucleoside phosphate metabolic process 4.08% (2/49) 4.05 0.006533 0.018894
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009123 nucleoside monophosphate metabolic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009161 ribonucleoside monophosphate metabolic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009124 nucleoside monophosphate biosynthetic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009126 purine nucleoside monophosphate metabolic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0006741 NADP biosynthetic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0003951 NAD+ kinase activity 2.04% (1/49) 7.05 0.00755 0.018926
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.04% (1/49) 7.05 0.00755 0.018926
GO:0044271 cellular nitrogen compound biosynthetic process 8.16% (4/49) 2.32 0.008287 0.0205
GO:0055086 nucleobase-containing small molecule metabolic process 4.08% (2/49) 3.77 0.009421 0.023002
GO:0009058 biosynthetic process 10.2% (5/49) 1.93 0.00969 0.023356
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 2.04% (1/49) 6.63 0.010055 0.023928
GO:0006739 NADP metabolic process 2.04% (1/49) 6.31 0.012553 0.028433
GO:0019359 nicotinamide nucleotide biosynthetic process 2.04% (1/49) 6.31 0.012553 0.028433
GO:0019363 pyridine nucleotide biosynthetic process 2.04% (1/49) 6.31 0.012553 0.028433
GO:0090407 organophosphate biosynthetic process 4.08% (2/49) 3.56 0.012421 0.02919
GO:0003824 catalytic activity 30.61% (15/49) 0.85 0.013368 0.029918
GO:0090304 nucleic acid metabolic process 8.16% (4/49) 2.06 0.015165 0.03277
GO:0072525 pyridine-containing compound biosynthetic process 2.04% (1/49) 6.05 0.015045 0.032889
GO:0016042 lipid catabolic process 2.04% (1/49) 6.05 0.015045 0.032889
GO:0009987 cellular process 22.45% (11/49) 1.03 0.015943 0.034061
GO:0008150 biological_process 30.61% (15/49) 0.81 0.017138 0.036202
GO:0019362 pyridine nucleotide metabolic process 2.04% (1/49) 5.82 0.017531 0.036218
GO:0046496 nicotinamide nucleotide metabolic process 2.04% (1/49) 5.82 0.017531 0.036218
GO:0043167 ion binding 18.37% (9/49) 1.15 0.018074 0.036934
GO:0071949 FAD binding 2.04% (1/49) 5.63 0.020011 0.039187
GO:0072524 pyridine-containing compound metabolic process 2.04% (1/49) 5.63 0.020011 0.039187
GO:0000049 tRNA binding 2.04% (1/49) 5.63 0.020011 0.039187
GO:1901135 carbohydrate derivative metabolic process 4.08% (2/49) 3.22 0.019488 0.039395
GO:0044249 cellular biosynthetic process 8.16% (4/49) 1.92 0.021256 0.040777
GO:0019637 organophosphate metabolic process 4.08% (2/49) 3.15 0.021241 0.041169
GO:0006066 alcohol metabolic process 2.04% (1/49) 5.46 0.022484 0.042697
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_124 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms