Coexpression cluster: Cluster_19 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901698 response to nitrogen compound 1.74% (2/115) 6.82 0.000129 0.002907
GO:0098661 inorganic anion transmembrane transport 1.74% (2/115) 6.82 0.000129 0.002907
GO:0010167 response to nitrate 1.74% (2/115) 6.82 0.000129 0.002907
GO:1902025 nitrate import 1.74% (2/115) 6.82 0.000129 0.002907
GO:0015706 nitrate transmembrane transport 1.74% (2/115) 6.82 0.000129 0.002907
GO:0016051 carbohydrate biosynthetic process 3.48% (4/115) 3.86 0.000173 0.003504
GO:0009312 oligosaccharide biosynthetic process 2.61% (3/115) 5.13 8.7e-05 0.004409
GO:0009311 oligosaccharide metabolic process 2.61% (3/115) 4.6 0.000265 0.00449
GO:0005984 disaccharide metabolic process 2.61% (3/115) 4.63 0.000247 0.004558
GO:0046351 disaccharide biosynthetic process 2.61% (3/115) 5.18 7.8e-05 0.005282
GO:0005991 trehalose metabolic process 2.61% (3/115) 5.29 6.2e-05 0.006316
GO:0005992 trehalose biosynthetic process 2.61% (3/115) 5.34 5.5e-05 0.011198
GO:1901700 response to oxygen-containing compound 1.74% (2/115) 5.01 0.001753 0.025417
GO:1902074 response to salt 1.74% (2/115) 5.01 0.001753 0.025417
GO:0015698 inorganic anion transport 1.74% (2/115) 4.6 0.003113 0.033259
GO:0016480 negative regulation of transcription by RNA polymerase III 0.87% (1/115) 8.4 0.002956 0.033332
GO:0006359 regulation of transcription by RNA polymerase III 0.87% (1/115) 8.4 0.002956 0.033332
GO:0010035 response to inorganic substance 1.74% (2/115) 4.76 0.002485 0.033628
GO:0055085 transmembrane transport 6.96% (8/115) 1.74 0.002815 0.03572
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_125 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_267 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_31 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_103 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_131 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_159 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_241 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_480 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (115) (download table)

InterPro Domains

GO Terms

Family Terms