Spov3_chr3.03013


Description : not classified


Gene families : OG0000152 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.03013
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.01092 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01093 AtPaspA3, PaspA3 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03841 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05395 CBP60c not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01150 BTZ1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03260 CLEL2, RGF8, GLV6 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02971 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 726 846
No external refs found!