Spov3_chr3.02419

Description : not classified

Gene families : OG0000393 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.02419
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0008.00081	CYP51A2, CYP51,...	obtusifoliol 14-alpha demethylase. EC_1.14...	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0015.00013	ROF2, ATFKBP65, FKBP65	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03231	No alias	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004521	RNA endonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004540	RNA nuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005162	Retrotrans_gag_dom	95	206
IPR029472	Copia-like_N	30	76

External Links

No external refs found!