Aliases : GSDA
Description : FRS/FRF-type transcription factor
Gene families : OG0000034 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000034_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0002.00012 | GSDA | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0005.00030 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0034.00015 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0038.00005 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0038.00006 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0054.00019 | HCF208, CCB2 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01844 | SDG40 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01845 | GSDA | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01854 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.02997 | No alias | FRS/FRF-type transcription factor | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.03937 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.00596 | ORTH4, VIM4 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.01880 | SDG40 | FRS/FRF-type transcription factor | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.01881 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.01114 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.01536 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.04069 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.04226 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.00463 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.01730 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.02482 | ORTH4, VIM4 | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.03253 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.01256 | GSDA | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.01959 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02685 | PAP25, ATPAP25 | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02686 | No alias | FRS/FRF-type transcription factor | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008146 | sulfotransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0046983 | protein dimerization activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018289 | MULE_transposase_dom | 3 | 65 |
No external refs found! |