1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr3.01232

Spov3_chr3.01232 (UMAMIT40)


Aliases : UMAMIT40

Description : not classified


Gene families : OG0000035 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.01232
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00083 CRK8 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0003.00010 CRK8 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0003.00011 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0005.00084 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0045.00007 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01662 PRISE not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04045 CRK8 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03496 CYP71A26 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04869 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00599 AFB3 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00773 ATACA3, ACA3 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01712 MED33B, REF4, MED5B not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02834 CRK8 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03540 CRK8 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01264 CRK8 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03076 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01137 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006412 translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!