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  5. Spov3_chr3.01176

Spov3_chr3.01176 (SRO5)


Aliases : SRO5

Description : FRS/FRF-type transcription factor


Gene families : OG0000271 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.01176
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.02451 FRS2 FRS/FRF-type transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 231 263
IPR018289 MULE_transposase_dom 3 39
No external refs found!