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  5. Spov3_chr3.00965

Spov3_chr3.00965 (CDC45)


Aliases : CDC45

Description : not classified


Gene families : OG0000453 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00965

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.03040 SASP not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03056 CTL16 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01393 PFA4, AtbHLH112 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01394 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 586 661
IPR004332 Transposase_MuDR 412 443
No external refs found!