Description : not classified
Gene families : OG0000226 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000226_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr3.00155 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0061.00003 | RASD1 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01584 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.02002 | RASD1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.02705 | PERK11, AtPERK11 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.03821 | EGRET | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.00819 | HPGT3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.01368 | SIL1, HDAC6,... | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005743 | mitochondrial inner membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006848 | pyruvate transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0015718 | monocarboxylic acid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0019207 | kinase regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0019866 | organelle inner membrane | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0019887 | protein kinase regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005162 | Retrotrans_gag_dom | 186 | 271 |
No external refs found! |