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  5. Spov3_chr3.00082

Spov3_chr3.00082 (PBL34)


Aliases : PBL34

Description : not classified


Gene families : OG0000171 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000171_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00082
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0055.00012 VDAC1, ATVDAC1 voltage-gated anion channel *(VDAC) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0149.00004 PDR2, ABCG30, ATPDR2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1422.00001 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S02.00080 IRX5, NWS2, CESA4 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04393 ZKT, MET1 voltage-gated anion channel *(VDAC). protein involved in... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04641 PDR2, ABCG30, ATPDR2 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03921 VDAC1, ATVDAC1 voltage-gated anion channel *(VDAC) 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01356 ZKT, MET1 protein involved in PS-II assembly *(MET1).... 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02001 ZKT, MET1 protein involved in PS-II assembly *(MET1).... 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!