Spov3_chr2.05040


Description : not classified


Gene families : OG0000357 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.05040
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_520

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.04121 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05572 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00031 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02365 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048364 root development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048731 system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!