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Aliases : TRM29, ACI1
Description : not classified
Gene families : OG0000049 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.04582 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_209 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0022.00001 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.00908 | MRU1, ATMRU1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02774 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02775 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02778 | GAL3 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05023 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00486 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01289 | TRM29, ACI1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02979 | MRU1, ATMRU1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03101 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03304 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00270 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02164 | MRU1, ATMRU1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02339 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03298 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03811 | SAV6, FEN1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03859 | TRM29, ACI1 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02382 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03007 | TRM29, ACI1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006950 | response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006979 | response to oxidative stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015711 | organic anion transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015743 | malate transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015849 | organic acid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046942 | carboxylic acid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |