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  5. Spov3_chr2.04088

Spov3_chr2.04088


Description : not classified


Gene families : OG0000099 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.04088

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0011.00051 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0017.00004 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02797 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02668 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01560 mtE2-1, LTA3 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00268 BRF2 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00617 MYB58, ATMYB58 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00707 CHR8 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01868 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02816 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02485 BRF2 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025558 DUF4283 100 235
No external refs found!