Description : not classified
Gene families : OG0000325 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000325_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.03802 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0009.00047 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_C0048.00021 | GTD1, HAF01,... | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S17.00010 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01129 | SDG5, FIS1, MEA, EMB173 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01130 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01131 | TRM2, LNG1, AtLNG1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01257 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.04325 | CYP89A3 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.00366 | ALKBH10B | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.02481 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004097 | catechol oxidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043484 | regulation of RNA splicing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0050684 | regulation of mRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004252 | Probable_transposase_24 | 2 | 71 |
No external refs found! |