1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr2.03474

Spov3_chr2.03474


Description : not classified


Gene families : OG0000595 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03474

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0048.00004 TBL15 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02367 ALF4 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01637 FL4 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0070939 Dsl1/NZR complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR045358 Ty3_capsid 27 158
IPR041577 RT_RNaseH_2 774 868
IPR000477 RT_dom 553 711
IPR041588 Integrase_H2C2 986 1041
No external refs found!