1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr2.03096

Spov3_chr2.03096 (AtPMS1, PMS1)


Aliases : AtPMS1, PMS1

Description : not classified


Gene families : OG0000267 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03096
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_437

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.02538 ABD1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03154 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02310 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 1225 1343
IPR029480 Transpos_assoc 5 78
IPR004242 Transposase_21 331 391
IPR025452 DUF4218 569 681
No external refs found!