Aliases : TOPP4
Description : not classified
Gene families : OG0000129 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.01539 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0002.00218 | MED17 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.00873 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01876 | PP2CA, ATPP2CA, AHG3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.04549 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.13 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.05582 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.05621 | ATRGTA2, RGTA2 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.03976 | ATRGTA2, RGTA2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.00140 | GS1, GPP2 | component *(DDA) of CDDD substrate adaptor module of... | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.03155 | LAC11 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02920 | PP2CA, ATPP2CA, AHG3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0042254 | ribosome biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0044085 | cellular component biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |