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Description : component *(uL13) of large ribosomal-subunit (LSU) proteome
Gene families : OG0006903 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.01251 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra020681 | No alias | component *(uL13) of large ribosomal-subunit (LSU) proteome | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005822 | Ribosomal_uL13 | 10 | 114 |
| No external refs found! |