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  5. Spov3_chr2.00552

Spov3_chr2.00552


Description : not classified


Gene families : OG0000265 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.00552
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_311

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0186.00001 HSL2 pre-rRNA cleavage factor involved in ITS1 rRNA removal... 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02336 ATTADA, TADA, TADA1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00343 ATTADA, TADA, TADA1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01686 ATTADA, TADA, TADA1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02131 ATTADA, TADA, TADA1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02538 ATTADA, TADA, TADA1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02768 SEC10 pre-rRNA cleavage factor involved in ITS1 rRNA removal... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01594 ATTADA, TADA, TADA1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 118 156
No external refs found!