Spov3_chr1.04499

Description : not classified

Gene families : OG0000017 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.04499

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0028.00018	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0112.00003	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00724	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04043	No alias	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04246	No alias	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02307	ALB1, PDE166,...	regulatory protein *(NIMIN1) of Systemic Acquired...	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02675	No alias	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02676	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02827	No alias	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03427	No alias	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01208	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02325	AtCLV3, CLV3	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03451	HTB6	regulatory protein *(NIMIN1) of Systemic Acquired...	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02187	ATA1, TA1, ASD	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02219	No alias	regulatory protein *(NIMIN1) of Systemic Acquired...	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02220	SIZ1, ATSIZ1	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04051	APE2, TPT	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04459	SDG35, ATXR1	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02287	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	53	151

External Links

No external refs found!

Spov3_chr1.04499

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation