- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : UVR3
Description : 6-4-type photolyase *(UVR3)
Gene families : OG0000725 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.04080 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_chr1.03483 | EDM2 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005048 | signal sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005319 | lipid transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005548 | phospholipid transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006869 | lipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015748 | organophosphate ester transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015914 | phospholipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0016459 | myosin complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0033218 | amide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042277 | peptide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045185 | maintenance of protein location | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0046923 | ER retention sequence binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0051213 | dioxygenase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051235 | maintenance of location | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051651 | maintenance of location in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |