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  5. Spov3_chr1.04078

Spov3_chr1.04078 (PTAC3, PDE324)


Aliases : PTAC3, PDE324

Description : not classified


Gene families : OG0000528 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.04078

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.04562 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02920 UBP1, ATUBP1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03162 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 822 856
IPR018289 MULE_transposase_dom 582 676
No external refs found!