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Aliases : NAP, ATNAP, ANAC029
Description : not classified
Gene families : OG0000015 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.02490 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_805 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0026.00029 | APX4, TL29 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0060.00004 | ATXIG, XIG | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0096.00001 | ASIL1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0329.00001 | NAP, ATNAP, ANAC029 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02270 | NAP, ATNAP, ANAC029 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03045 | NAP, ATNAP, ANAC029 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.01992 | ASIL1 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02196 | CRK15 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04484 | NAP, ATNAP, ANAC029 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04496 | RPG1, SWEET8, AtSWEET8 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03937 | ATEGY2, EGY2 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03992 | IAA20 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |