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  5. Spov3_chr1.02451

Spov3_chr1.02451


Description : not classified


Gene families : OG0000719 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000719_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02451
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_427

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.03580 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03581 RIP1, ICR1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04339 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00230 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00918 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.00622 ARC1, FtsHi1 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02633 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01903 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006754 ATP biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 579 691
IPR007527 Znf_SWIM 844 869
IPR004332 Transposase_MuDR 362 412
No external refs found!