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  5. Spov3_chr1.02248

Spov3_chr1.02248


Description : not classified


Gene families : OG0000064 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02248

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0006.00006 ATEXO70D2, EXO70D2 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0011.00034 emb1579, RSA1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0011.00056 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00103 VAL3 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01307 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02580 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02550 LOS1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02703 SLAH3 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02953 APO4 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01226 CYP96A11 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01663 ILL6 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02294 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01359 AHL24 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02108 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03457 SPT5L, KTF1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02387 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030570 pectate lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!