Spov3_chr1.01761 (PIR121, ATSRA1, LPL2,...)

Aliases : PIR121, ATSRA1, LPL2, KLK, SRA1, PIR, PIRP

Description : not classified

Gene families : OG0000016 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.01761
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_209

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0003.00109	RGLG4	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0016.00051	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0026.00017	GRP23, ATGRP23	not classified	0.07	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0048.00018	AtCHC1, CHC1, HAS1	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0106.00004	HAE, RLK5	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01597	ATGWD3, OK1, PWD	not classified	0.07	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02842	RGLG4	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01320	ACT12	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01370	RID4, GEND1	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02133	BLH4, SAW2	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02584	ACT12	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02987	ACT12	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04595	ABCI19, ATNAP4	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00212	ATSYP42,...	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00213	RGLG4	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03113	GGL22	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01587	PP2C49	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02075	FY, WDR33	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03668	HAE, RLK5	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01531	HAE, RLK5	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02746	HAE, RLK5	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03343	KR	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03609	ACT12	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04042	ACT12	not classified	0.07	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01569	ATGWD3, OK1, PWD	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01919	RGLG4	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02462	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03057	No alias	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004602	glutathione peroxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006835	dicarboxylic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008170	N-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015740	C4-dicarboxylate transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070475	rRNA base methylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	814	910
IPR041588	Integrase_H2C2	746	796
IPR041373	RT_RNaseH	550	653

External Links

No external refs found!

Spov3_chr1.01761 (PIR121, ATSRA1, LPL2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation