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Description : not classified
Gene families : OG0000033 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000033_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.01012 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_601 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0001.00043 | PDE181, ZDS, SPC1 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0001.00062 | GPX3, ATGPX3, GPXL3 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0005.00081 | GPX3, ATGPX3, GPXL3 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0008.00049 | GPX3, ATGPX3, GPXL3 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0021.00030 | LCV1 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0072.00002 | GPX3, ATGPX3, GPXL3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1131.00001 | AtDOB13 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00164 | AtBBE21, OGOX2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00177 | ACM1, EMB1270 | not classified | 0.13 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S12.00046 | HSP91, AtHsp70-14 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S14.00010 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.00634 | atnudt20, NUDT20 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02629 | GPX3, ATGPX3, GPXL3 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03774 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00481 | GPX3, ATGPX3, GPXL3 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02198 | ACM1, EMB1270 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03258 | GPX3, ATGPX3, GPXL3 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03765 | GPX3, ATGPX3, GPXL3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.04818 | HOS15, OLI1 | not classified | 0.13 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03533 | PDE181, ZDS, SPC1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02673 | MEL1, NPY5 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000278 | mitotic cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007049 | cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0035556 | intracellular signal transduction | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0098687 | chromosomal region | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140299 | small molecule sensor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |